RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 TMEM168Q9H0V1 697 aa10.61□□□□□ -0.71
SKA2-204ENST00000578519 IKZF5Q9H5V7 419 aa10.61□□□□□ -0.71
SKA2-204ENST00000578519 TM9SF3Q9HD45 589 aa10.61□□□□□ -0.71
SKA2-204ENST00000578519 PRDM9Q9NQV7 894 aa10.61□□□□□ -0.71
SKA2-204ENST00000578519 EBF1Q9UH73 591 aa10.61□□□□□ -0.71
SKA2-204ENST00000578519 ZNF639Q9UID6 485 aa10.61□□□□□ -0.71
SKA2-204ENST00000578519 OAZ3Q9UMX2 235 aa10.61□□□□□ -0.71
SKA2-204ENST00000578519 ENTPD4Q9Y227 616 aa10.61□□□□□ -0.71
SKA2-204ENST00000578519 NEUROG3Q9Y4Z2 214 aa10.61□□□□□ -0.71
SKA2-204ENST00000578519 SPACA6W5XKT8 324 aa10.61□□□□□ -0.71
SKA2-204ENST00000578519 BRCA2P51587 3418 aa10.61□□□□□ -0.71
SKA2-204ENST00000578519 SPTY2D1-AS1A0A0U1RR47 76 aa10.6□□□□□ -0.71
SKA2-204ENST00000578519 A6NHS1 94 aa10.6□□□□□ -0.71
SKA2-204ENST00000578519 VILLO15195 856 aa10.6□□□□□ -0.71
SKA2-204ENST00000578519 TNFSF14O43557 240 aa10.6□□□□□ -0.71
SKA2-204ENST00000578519 NOBOXO60393 691 aa10.6□□□□□ -0.71
SKA2-204ENST00000578519 DPM1O60762 260 aa10.6□□□□□ -0.71
SKA2-204ENST00000578519 GBAP04062 536 aa10.6□□□□□ -0.71
SKA2-204ENST00000578519 NTRK1P04629 796 aa10.6□□□□□ -0.71
SKA2-204ENST00000578519 FABP3P05413 133 aa10.6□□□□□ -0.71
SKA2-204ENST00000578519 AK4P27144 223 aaPredicted RBP10.6□□□□□ -0.71
SKA2-204ENST00000578519 TLX1P31314 330 aaPredicted RBP10.6□□□□□ -0.71
SKA2-204ENST00000578519 CAPGP40121 348 aa10.6□□□□□ -0.71
SKA2-204ENST00000578519 SLC19A1P41440 591 aa10.6□□□□□ -0.71
SKA2-204ENST00000578519 SH3BGRP55822 239 aaPredicted RBP10.6□□□□□ -0.71
SKA2-204ENST00000578519 YBX1P67809 324 aaKnown RBP10.6□□□□□ -0.71
SKA2-204ENST00000578519 HBA1P69905 142 aa10.6□□□□□ -0.71
SKA2-204ENST00000578519 DAG1Q14118 895 aa10.6□□□□□ -0.71
SKA2-204ENST00000578519 UBXN2BQ14CS0 331 aa10.6□□□□□ -0.71
SKA2-204ENST00000578519 ELOCQ15369 112 aa10.6□□□□□ -0.71
SKA2-204ENST00000578519 CCDC85BQ15834 202 aaPredicted RBP10.6□□□□□ -0.71
SKA2-204ENST00000578519 ADPRMQ3LIE5 342 aa10.6□□□□□ -0.71
SKA2-204ENST00000578519 TOR1AIP1Q5JTV8 583 aa10.6□□□□□ -0.71
SKA2-204ENST00000578519 C6orf52Q5T4I8 152 aa10.6□□□□□ -0.71
SKA2-204ENST00000578519 ADNP2Q6IQ32 1131 aa10.6□□□□□ -0.71
SKA2-204ENST00000578519 PTCRAQ6ISU1 281 aaPredicted RBP10.6□□□□□ -0.71
SKA2-204ENST00000578519 ZNF425Q6IV72 752 aa10.6□□□□□ -0.71
SKA2-204ENST00000578519 UGT2A3Q6UWM9 527 aa10.6□□□□□ -0.71
SKA2-204ENST00000578519 TMEM26Q6ZUK4 368 aa10.6□□□□□ -0.71
SKA2-204ENST00000578519 ASPGQ86U10 573 aa10.6□□□□□ -0.71
SKA2-204ENST00000578519 STK32CQ86UX6 486 aa10.6□□□□□ -0.71
SKA2-204ENST00000578519 PAQR7Q86WK9 346 aa10.6□□□□□ -0.71
SKA2-204ENST00000578519 ZC3H7AQ8IWR0 971 aaKnown RBP10.6□□□□□ -0.71
SKA2-204ENST00000578519 CAMKK1Q8N5S9 505 aa10.6□□□□□ -0.71
SKA2-204ENST00000578519 CADM4Q8NFZ8 388 aa10.6□□□□□ -0.71
SKA2-204ENST00000578519 OR13H1Q8NG92 308 aa10.6□□□□□ -0.71
SKA2-204ENST00000578519 NT5CQ8TCD5 201 aa10.6□□□□□ -0.71
SKA2-204ENST00000578519 MAGEE2Q8TD90 523 aaPredicted RBP10.6□□□□□ -0.71
SKA2-204ENST00000578519 RASSF5Q8WWW0 418 aa10.6□□□□□ -0.71
SKA2-204ENST00000578519 TFAP2CQ92754 450 aa10.6□□□□□ -0.71
SKA2-204ENST00000578519 GAL3ST3Q96A11 431 aa10.6□□□□□ -0.71
SKA2-204ENST00000578519 RERGQ96A58 199 aaPredicted RBP10.6□□□□□ -0.71
SKA2-204ENST00000578519 SPACA7Q96KW9 195 aa10.6□□□□□ -0.71
SKA2-204ENST00000578519 BBS4Q96RK4 519 aa10.6□□□□□ -0.71
SKA2-204ENST00000578519 ZNF347Q96SE7 839 aa10.6□□□□□ -0.71
SKA2-204ENST00000578519 SLC29A1Q99808 456 aa10.6□□□□□ -0.71
SKA2-204ENST00000578519 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.6□□□□□ -0.71
SKA2-204ENST00000578519 SLC6A16Q9GZN6 736 aa10.6□□□□□ -0.71
SKA2-204ENST00000578519 OCEL1Q9H607 264 aa10.6□□□□□ -0.71
SKA2-204ENST00000578519 C6orf106Q9H6K1 298 aaPredicted RBP10.6□□□□□ -0.71
SKA2-204ENST00000578519 ZNF696Q9H7X3 374 aa10.6□□□□□ -0.71
SKA2-204ENST00000578519 IL1RAPQ9NPH3 570 aa10.6□□□□□ -0.71
SKA2-204ENST00000578519 SLC6A13Q9NSD5 602 aa10.6□□□□□ -0.71
SKA2-204ENST00000578519 MS4A12Q9NXJ0 267 aa10.6□□□□□ -0.71
SKA2-204ENST00000578519 SCHIP1Q9P0W5 487 aaPredicted RBP10.6□□□□□ -0.71
SKA2-204ENST00000578519 THEGQ9P2T0 379 aa10.6□□□□□ -0.71
SKA2-204ENST00000578519 PHF11Q9UIL8 331 aa10.6□□□□□ -0.71
SKA2-204ENST00000578519 C3orf18Q9UK00 162 aa10.6□□□□□ -0.71
SKA2-204ENST00000578519 USP22Q9UPT9 525 aa10.6□□□□□ -0.71
SKA2-204ENST00000578519 BTBD3Q9Y2F9 522 aa10.6□□□□□ -0.71
SKA2-204ENST00000578519 MYRFQ9Y2G1 1151 aa10.6□□□□□ -0.71
SKA2-204ENST00000578519 V9GYQ6 96 aa10.6□□□□□ -0.71
SKA2-204ENST00000578519 A0A0A6YYD5 115 aa10.59□□□□□ -0.71
SKA2-204ENST00000578519 FAM149AA5PLN7 773 aa10.59□□□□□ -0.71
SKA2-204ENST00000578519 C10orf142B7Z368 130 aa10.59□□□□□ -0.71
SKA2-204ENST00000578519 SOCS2O14508 198 aa10.59□□□□□ -0.71
SKA2-204ENST00000578519 HAT1O14929 419 aa10.59□□□□□ -0.71
SKA2-204ENST00000578519 ZSCAN9O15535 394 aaPredicted RBP10.59□□□□□ -0.71
SKA2-204ENST00000578519 ERI3O43414 337 aaKnown RBP10.59□□□□□ -0.71
SKA2-204ENST00000578519 LCMT2O60294 686 aaKnown RBP10.59□□□□□ -0.71
SKA2-204ENST00000578519 SMNDC1O75940 238 aaKnown RBP eCLIP10.59□□□□□ -0.71
SKA2-204ENST00000578519 IGHV4-34P06331 123 aa10.59□□□□□ -0.71
SKA2-204ENST00000578519 CD72P21854 359 aa10.59□□□□□ -0.71
SKA2-204ENST00000578519 HIST1H1TP22492 207 aaPredicted RBP10.59□□□□□ -0.71
SKA2-204ENST00000578519 CD27P26842 260 aa10.59□□□□□ -0.71
SKA2-204ENST00000578519 MPIP34949 423 aa10.59□□□□□ -0.71
SKA2-204ENST00000578519 GPC1P35052 558 aa10.59□□□□□ -0.71
SKA2-204ENST00000578519 BCL6P41182 706 aa10.59□□□□□ -0.71
SKA2-204ENST00000578519 BUD31P41223 144 aaPredicted RBP10.59□□□□□ -0.71
SKA2-204ENST00000578519 PLA2G16P53816 162 aa10.59□□□□□ -0.71
SKA2-204ENST00000578519 ARSFP54793 590 aa10.59□□□□□ -0.71
SKA2-204ENST00000578519 TPD52P55327 224 aaPredicted RBP10.59□□□□□ -0.71
SKA2-204ENST00000578519 STARD6P59095 220 aa10.59□□□□□ -0.71
SKA2-204ENST00000578519 DSTNP60981 165 aa10.59□□□□□ -0.71
SKA2-204ENST00000578519 SKP1P63208 163 aa10.59□□□□□ -0.71
SKA2-204ENST00000578519 MC1RQ01726 317 aa10.59□□□□□ -0.71
SKA2-204ENST00000578519 SLAMF1Q13291 335 aa10.59□□□□□ -0.71
SKA2-204ENST00000578519 SCARB2Q14108 478 aa10.59□□□□□ -0.71
SKA2-204ENST00000578519 SPIDRQ14159 915 aa10.59□□□□□ -0.71
SKA2-204ENST00000578519 ZNF385BQ569K4 471 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms