RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-209	ENST00000578329	FAM95C	A0A1B0GW59	222 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	NKX2-6	A6NCS4	301 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	LRRC3C	A6NJW4	275 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	FAM159B	A6NKW6	160 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329		G3V3Y1	287 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	TXNDC9	O14530	226 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	NDC80	O14777	642 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	PRPF4	O43172	522 aa	Known RBP eCLIP	4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	HS6ST1	O60243	411 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	KLHL41	O60662	606 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	PRMT3	O60678	531 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	OR2J2	O76002	312 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	KRT38	O76015	456 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	SCEL	O95171	688 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	CRYAB	P02511	175 aa	Known RBP	4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	IGKV3-11	P04433	115 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	SBK3	P0C264	359 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	SLC35E2B	P0CK96	405 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	C1GALT1C1L	P0DN25	315 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	CCL3	P10147	92 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ICAM2	P13598	275 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	CD1D	P15813	335 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	PAM	P19021	973 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	TFEB	P19484	476 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	AGA	P20933	346 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ELAVL4	P26378	380 aa	Known RBP	4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	CERS1	P27544	350 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ADH7	P40394	386 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	SOX3	P41225	446 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	MEOX1	P50221	254 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	HK2	P52789	917 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	LIM2	P55344	173 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	AP1S2	P56377	157 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	IL2	P60568	153 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	BTN3A2	P78410	334 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ID2	Q02363	134 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	MGAT5	Q09328	741 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	DUSP8	Q13202	625 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	DOC2A	Q14183	400 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ELOA	Q14241	798 aa	Known RBP	4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	SLBP	Q14493	270 aa	Known RBP eCLIP	4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	NAA25	Q14CX7	972 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	MORF4L2	Q15014	288 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	EFTUD2	Q15029	972 aa	Known RBP eCLIP	4.13	□□□□□ -1.75	1e-5	■□□□□ 9
PPP4R1-209	ENST00000578329	HERC3	Q15034	1050 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	TGFBI	Q15582	683 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	EXT1	Q16394	746 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	NDUFA9	Q16795	377 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ZNF750	Q32MQ0	723 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	FNDC7	Q5VTL7	733 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	DESI1	Q6ICB0	168 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	CLNK	Q7Z7G1	428 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	TMPRSS11B	Q86T26	416 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ISCA2	Q86U28	154 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	CCDC71	Q8IV32	467 aa	Predicted RBP	4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	C9orf40	Q8IXQ3	194 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	KLHL7	Q8IXQ5	586 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	CENPL	Q8N0S6	344 aa	Predicted RBP	4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	MYO1H	Q8N1T3	1032 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	C17orf53	Q8N3J3	647 aa	Predicted RBP	4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	TMEM151A	Q8N4L1	468 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	RAB42	Q8N4Z0	105 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	GPATCH11	Q8N954	259 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	FAM47B	Q8NA70	645 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	SIMC1	Q8NDZ2	872 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	FBXO36	Q8NEA4	188 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	B3GNT7	Q8NFL0	401 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	GSDMB	Q8TAX9	411 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	FAM57A	Q8TBR7	257 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	CALML6	Q8TD86	181 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ZNF721	Q8TF20	911 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ZNF473	Q8WTR7	871 aa	Known RBP	4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	PHF10	Q8WUB8	498 aa	Known RBP	4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ANKRD7	Q92527	254 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	NCLN	Q969V3	563 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	MTFMT	Q96DP5	389 aa	Known RBP	4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	VPS39	Q96JC1	886 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	SCYL1	Q96KG9	808 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	ATOH8	Q96SQ7	321 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	LPAR4	Q99677	370 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	MAPKAP1	Q9BPZ7	522 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	UTP23	Q9BRU9	249 aa	Known RBP	4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	HAUS8	Q9BT25	410 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	CNPPD1	Q9BV87	410 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	MS4A8	Q9BY19	250 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	PCBD2	Q9H0N5	130 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	RHBG	Q9H310	441 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	LIME1	Q9H400	295 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	NT5DC2	Q9H857	520 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	PRDM9	Q9NQV7	894 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	SAMD15	Q9P1V8	674 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	SPRR3	Q9UBC9	169 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	SNX24	Q9Y343	169 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	OARD1	Q9Y530	152 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	NIN	Q8N4C6	2090 aa		4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	NSD1	Q96L73	2696 aa	Predicted RBP	4.13	□□□□□ -1.75
PPP4R1-209	ENST00000578329	FN1	P02751	2386 aa	Known RBP	4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	PRR14L	Q5THK1	2151 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329	TRBV11-1	A0A0K0K1C0	115 aa		4.12	□□□□□ -1.75
PPP4R1-209	ENST00000578329		A0A1B0GVC2	190 aa		4.12	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 31 ms