RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 AMD1P17707 334 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 TNFRSF1BP20333 461 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 HTR1BP28222 390 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 IDH2P48735 452 aaKnown RBP5.14□□□□□ -1.59
VAPA-203ENST00000577539 MAN2A2P49641 1150 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 HNMTP50135 292 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 ISL1P61371 349 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 SNRPNP63162 240 aaKnown RBP5.14□□□□□ -1.59
VAPA-203ENST00000577539 VLDLRP98155 873 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 MAPK11Q15759 364 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 MOGQ16653 247 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 CDKN3Q16667 212 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 TRIM16LQ309B1 348 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 TBC1D25Q3MII6 688 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 CYP27C1Q4G0S4 372 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 TMEM177Q53S58 311 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 PRAMEF9Q5VWM5 478 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 CPZQ66K79 652 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 XAF1Q6GPH4 301 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 AGTRAPQ6RW13 159 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 ZNF554Q86TJ5 538 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 TRIM74Q86UV6 250 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 ARMC10Q8N2F6 343 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 SMYD1Q8NB12 490 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 OR4K1Q8NGD4 311 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 UTP15Q8TED0 518 aaKnown RBP5.14□□□□□ -1.59
VAPA-203ENST00000577539 EDARADDQ8WWZ3 215 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 UBL7Q96S82 380 aaPredicted RBP5.14□□□□□ -1.59
VAPA-203ENST00000577539 WRAP53Q9BUR4 548 aaKnown RBP5.14□□□□□ -1.59
VAPA-203ENST00000577539 GFOD1Q9NXC2 390 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 STOML2Q9UJZ1 356 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 TMCC3Q9ULS5 477 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 PLXNA3P51805 1871 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 ARHGEF33A8MVX0 844 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 SUV39H1O43463 412 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 NUAK1O60285 661 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 LEFTY1O75610 366 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 CPNE6O95741 557 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 CYP2A6P11509 494 aaPredicted RBP5.14□□□□□ -1.59
VAPA-203ENST00000577539 JUPP14923 745 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 POLR2EP19388 210 aaKnown RBP5.14□□□□□ -1.59
VAPA-203ENST00000577539 EPHA2P29317 976 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 NRIP1P48552 1158 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 PRIM2P49643 509 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 CTSCP53634 463 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 AP1S2P56377 157 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 UGT8Q16880 541 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 SMU1Q2TAY7 513 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 PAGE2BQ5JRK9 111 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 DUS1LQ6P1R4 473 aaKnown RBP5.14□□□□□ -1.59
VAPA-203ENST00000577539 HTR3DQ70Z44 454 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 OTOP2Q7RTS6 562 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 TRAPPC5Q8IUR0 188 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 PLD3Q8IV08 490 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 GALNT6Q8NCL4 622 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 RCBTB1Q8NDN9 531 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 IPCEF1Q8WWN9 437 aaPredicted RBP5.14□□□□□ -1.59
VAPA-203ENST00000577539 CLIP3Q96DZ5 547 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 FAM46AQ96IP4 442 aaKnown RBP5.14□□□□□ -1.59
VAPA-203ENST00000577539 COX4I2Q96KJ9 171 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 ZNF641Q96N77 438 aaPredicted RBP5.14□□□□□ -1.59
VAPA-203ENST00000577539 CSF3RQ99062 836 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 RHNO1Q9BSD3 238 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 ACAT2Q9BWD1 397 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 ASPNQ9BXN1 380 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 ROGDIQ9GZN7 287 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 THUMPD1Q9NXG2 353 aaKnown RBP5.14□□□□□ -1.59
VAPA-203ENST00000577539 USE1Q9NZ43 259 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 LMCD1Q9NZU5 365 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 DAPK2Q9UIK4 370 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 CDH7Q9ULB5 785 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 FZD4Q9ULV1 537 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.14□□□□□ -1.59
VAPA-203ENST00000577539 RUVBL1Q9Y265 456 aaKnown RBP5.14□□□□□ -1.59
VAPA-203ENST00000577539 BTBD3Q9Y2F9 522 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 ZNF510Q9Y2H8 683 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 TRIM64A6NGJ6 449 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 KPNA5O15131 536 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 TMCC2O75069 709 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 UGT2B11O75310 529 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 SLC16A8O95907 504 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 MT-ND2P03891 347 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 TYRP14679 529 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 LAG3P18627 525 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 FPR1P21462 350 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 OPRL1P41146 370 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 GRK6P43250 576 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 LSSP48449 732 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 TRPC1P48995 793 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 DAPP51397 102 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 VBP1P61758 197 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 MEF2AQ02078 507 aaPredicted RBP5.14□□□□□ -1.59
VAPA-203ENST00000577539 EMX1Q04741 257 aaPredicted RBP5.14□□□□□ -1.59
VAPA-203ENST00000577539 LRRC74AQ0VAA2 488 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 GRSF1Q12849 480 aaKnown RBP eCLIP5.14□□□□□ -1.59
VAPA-203ENST00000577539 TUBA3CQ13748 450 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 SYT16Q17RD7 645 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 RGS21Q2M5E4 152 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 LY6G5CQ5SRR4 150 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 LRIF1Q5T3J3 769 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms