RNA–Protein interactions for RNA: ENST00000577435.5

GGA3-203, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-203ENST00000577435 SEC24DO94855 1032 aaPredicted RBP13.12□□□□□ -0.31
GGA3-203ENST00000577435 SCELO95171 688 aa13.12□□□□□ -0.31
GGA3-203ENST00000577435 CLDN9O95484 217 aa13.12□□□□□ -0.31
GGA3-203ENST00000577435 GSTA1P08263 222 aa13.12□□□□□ -0.31
GGA3-203ENST00000577435 ITGAMP11215 1152 aa13.12□□□□□ -0.31
GGA3-203ENST00000577435 EEF1DP29692 281 aaKnown RBP13.12□□□□□ -0.31
GGA3-203ENST00000577435 TSFMP43897 325 aaKnown RBP13.12□□□□□ -0.31
GGA3-203ENST00000577435 MLLT10P55197 1068 aa13.12□□□□□ -0.31
GGA3-203ENST00000577435 HSD17B7P56937 341 aa13.12□□□□□ -0.31
GGA3-203ENST00000577435 OR4D2P58180 307 aa13.12□□□□□ -0.31
GGA3-203ENST00000577435 BTG2P78543 158 aa13.12□□□□□ -0.31
GGA3-203ENST00000577435 KCNC4Q03721 635 aa13.12□□□□□ -0.31
GGA3-203ENST00000577435 ACTN3Q08043 901 aaPredicted RBP13.12□□□□□ -0.31
GGA3-203ENST00000577435 RCN2Q14257 317 aa13.12□□□□□ -0.31
GGA3-203ENST00000577435 SFT2D3Q587I9 215 aa13.12□□□□□ -0.31
GGA3-203ENST00000577435 PAPD4Q6PIY7 484 aaKnown RBP13.12□□□□□ -0.31
GGA3-203ENST00000577435 SCUBE1Q8IWY4 988 aa13.12□□□□□ -0.31
GGA3-203ENST00000577435 HUS1BQ8NHY5 278 aa13.12□□□□□ -0.31
GGA3-203ENST00000577435 TSLPQ969D9 159 aa13.12□□□□□ -0.31
GGA3-203ENST00000577435 REPS1Q96D71 796 aa13.12□□□□□ -0.31
GGA3-203ENST00000577435 RBCK1Q9BYM8 510 aa13.12□□□□□ -0.31
GGA3-203ENST00000577435 TRIM4Q9C037 500 aa13.12□□□□□ -0.31
GGA3-203ENST00000577435 NOL11Q9H8H0 719 aaKnown RBP13.12□□□□□ -0.31
GGA3-203ENST00000577435 ZBTB26Q9HCK0 441 aa13.12□□□□□ -0.31
GGA3-203ENST00000577435 LYRM4Q9HD34 91 aa13.12□□□□□ -0.31
GGA3-203ENST00000577435 MMP25Q9NPA2 562 aa13.12□□□□□ -0.31
GGA3-203ENST00000577435 KCMF1Q9P0J7 381 aa13.12□□□□□ -0.31
GGA3-203ENST00000577435 TMEM216Q9P0N5 145 aa13.12□□□□□ -0.31
GGA3-203ENST00000577435 PCTPQ9UKL6 214 aa13.12□□□□□ -0.31
GGA3-203ENST00000577435 RNF11Q9Y3C5 154 aa13.12□□□□□ -0.31
GGA3-203ENST00000577435 POLEQ07864 2286 aa13.11□□□□□ -0.31
GGA3-203ENST00000577435 A0A0G2JN53 185 aa13.11□□□□□ -0.31
GGA3-203ENST00000577435 SYNDIG1LA6NDD5 238 aa13.11□□□□□ -0.31
GGA3-203ENST00000577435 FOXE1O00358 373 aaPredicted RBP13.11□□□□□ -0.31
GGA3-203ENST00000577435 CYR61O00622 381 aa13.11□□□□□ -0.31
GGA3-203ENST00000577435 CLDN4O14493 209 aa13.11□□□□□ -0.31
GGA3-203ENST00000577435 OR7A17O14581 309 aa13.11□□□□□ -0.31
GGA3-203ENST00000577435 TGFB1P01137 390 aa13.11□□□□□ -0.31
GGA3-203ENST00000577435 CELA2AP08217 269 aa13.11□□□□□ -0.31
GGA3-203ENST00000577435 RPS17P08708 135 aaKnown RBP13.11□□□□□ -0.31
GGA3-203ENST00000577435 PCNAP12004 261 aa13.11□□□□□ -0.31
GGA3-203ENST00000577435 ATP5A1P25705 553 aaKnown RBP13.11□□□□□ -0.31
GGA3-203ENST00000577435 PTX3P26022 381 aaPredicted RBP13.11□□□□□ -0.31
GGA3-203ENST00000577435 LIM2P55344 173 aa13.11□□□□□ -0.31
GGA3-203ENST00000577435 INPP5JQ15735 1006 aaPredicted RBP13.11□□□□□ -0.31
GGA3-203ENST00000577435 IGFBP7Q16270 282 aa13.11□□□□□ -0.31
GGA3-203ENST00000577435 AP5B1Q2VPB7 878 aa13.11□□□□□ -0.31
GGA3-203ENST00000577435 BTBD16Q32M84 506 aa13.11□□□□□ -0.31
GGA3-203ENST00000577435 C10orf62Q5T681 223 aaPredicted RBP13.11□□□□□ -0.31
GGA3-203ENST00000577435 KHDRBS2Q5VWX1 349 aaKnown RBP13.11□□□□□ -0.31
GGA3-203ENST00000577435 ZNF793Q6ZN11 406 aa13.11□□□□□ -0.31
GGA3-203ENST00000577435 SH2D5Q6ZV89 423 aa13.11□□□□□ -0.31
GGA3-203ENST00000577435 ZNF595Q8IYB9 648 aa13.11□□□□□ -0.31
GGA3-203ENST00000577435 ARMC2Q8NEN0 867 aa13.11□□□□□ -0.31
GGA3-203ENST00000577435 DNAJB14Q8TBM8 379 aa13.11□□□□□ -0.31
GGA3-203ENST00000577435 WDR20Q8TBZ3 569 aa13.11□□□□□ -0.31
GGA3-203ENST00000577435 CPT1CQ8TCG5 803 aa13.11□□□□□ -0.31
GGA3-203ENST00000577435 UBLCP1Q8WVY7 318 aaPredicted RBP13.11□□□□□ -0.31
GGA3-203ENST00000577435 HAS2Q92819 552 aa13.11□□□□□ -0.31
GGA3-203ENST00000577435 RNF32Q9H0A6 362 aa13.11□□□□□ -0.31
GGA3-203ENST00000577435 COPS7BQ9H9Q2 264 aaPredicted RBP13.11□□□□□ -0.31
GGA3-203ENST00000577435 PTGFRNQ9P2B2 879 aa13.11□□□□□ -0.31
GGA3-203ENST00000577435 DCDC2Q9UHG0 476 aa13.11□□□□□ -0.31
GGA3-203ENST00000577435 MRPS33Q9Y291 106 aaKnown RBP13.11□□□□□ -0.31
GGA3-203ENST00000577435 CLDN16Q9Y5I7 305 aa13.11□□□□□ -0.31
GGA3-203ENST00000577435 BLACEA4D250 179 aa13.1□□□□□ -0.31
GGA3-203ENST00000577435 A8MT66 165 aa13.1□□□□□ -0.31
GGA3-203ENST00000577435 CDK2AP1O14519 115 aa13.1□□□□□ -0.31
GGA3-203ENST00000577435 CTNSO60931 367 aa13.1□□□□□ -0.31
GGA3-203ENST00000577435 SHBGP04278 402 aa13.1□□□□□ -0.31
GGA3-203ENST00000577435 PYGBP11216 843 aa13.1□□□□□ -0.31
GGA3-203ENST00000577435 TAC1P20366 129 aa13.1□□□□□ -0.31
GGA3-203ENST00000577435 HIST1H1TP22492 207 aaPredicted RBP13.1□□□□□ -0.31
GGA3-203ENST00000577435 CERS1P27544 350 aa13.1□□□□□ -0.31
GGA3-203ENST00000577435 CCNG1P51959 295 aa13.1□□□□□ -0.31
GGA3-203ENST00000577435 SLC26A5P58743 744 aa13.1□□□□□ -0.31
GGA3-203ENST00000577435 PHEXP78562 749 aa13.1□□□□□ -0.31
GGA3-203ENST00000577435 TRAF3Q13114 568 aa13.1□□□□□ -0.31
GGA3-203ENST00000577435 CUL3Q13618 768 aa13.1□□□□□ -0.31
GGA3-203ENST00000577435 TLR1Q15399 786 aa13.1□□□□□ -0.31
GGA3-203ENST00000577435 ZRSR2Q15696 482 aaKnown RBP13.1□□□□□ -0.31
GGA3-203ENST00000577435 CPSF6Q16630 551 aaKnown RBP eCLIP13.1□□□□□ -0.31
GGA3-203ENST00000577435 GGTA1PQ4G0N0 100 aa13.1□□□□□ -0.31
GGA3-203ENST00000577435 OR4C11Q6IEV9 310 aa13.1□□□□□ -0.31
GGA3-203ENST00000577435 LINC00696Q6ZRV3 163 aa13.1□□□□□ -0.31
GGA3-203ENST00000577435 CUZD1Q86UP6 607 aa13.1□□□□□ -0.31
GGA3-203ENST00000577435 MYLK4Q86YV6 388 aaPredicted RBP13.1□□□□□ -0.31
GGA3-203ENST00000577435 IQCKQ8N0W5 287 aa13.1□□□□□ -0.31
GGA3-203ENST00000577435 SIRT6Q8N6T7 355 aa13.1□□□□□ -0.31
GGA3-203ENST00000577435 AMER2Q8N7J2 671 aa13.1□□□□□ -0.31
GGA3-203ENST00000577435 ACOT4Q8N9L9 421 aa13.1□□□□□ -0.31
GGA3-203ENST00000577435 C7orf57Q8NEG2 295 aa13.1□□□□□ -0.31
GGA3-203ENST00000577435 MYRIPQ8NFW9 859 aa13.1□□□□□ -0.31
GGA3-203ENST00000577435 OR52B6Q8NGF0 335 aa13.1□□□□□ -0.31
GGA3-203ENST00000577435 ELP5Q8TE02 316 aa13.1□□□□□ -0.31
GGA3-203ENST00000577435 ZNF483Q8TF39 744 aaPredicted RBP13.1□□□□□ -0.31
GGA3-203ENST00000577435 ATP6V1E2Q96A05 226 aa13.1□□□□□ -0.31
GGA3-203ENST00000577435 RGMAQ96B86 450 aa13.1□□□□□ -0.31
GGA3-203ENST00000577435 MAGEB10Q96LZ2 347 aaPredicted RBP13.1□□□□□ -0.31
GGA3-203ENST00000577435 CENPKQ9BS16 269 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms