RNA–Protein interactions for RNA: ENST00000574776.5

CTNS-209, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 4

Gene CTNS, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-209ENST00000574776 LIN28AQ9H9Z2 209 aaKnown RBP14.19□□□□□ -0.14
CTNS-209ENST00000574776 ZNF223Q9UK11 482 aaPredicted RBP14.19□□□□□ -0.14
CTNS-209ENST00000574776 CSMD2Q7Z408 3487 aa14.18□□□□□ -0.14
CTNS-209ENST00000574776 CLDN4O14493 209 aa14.18□□□□□ -0.14
CTNS-209ENST00000574776 TAPBPO15533 448 aa14.18□□□□□ -0.14
CTNS-209ENST00000574776 B3GALT2O43825 422 aa14.18□□□□□ -0.14
CTNS-209ENST00000574776 HS6ST1O60243 411 aa14.18□□□□□ -0.14
CTNS-209ENST00000574776 PRKNO60260 465 aaPredicted RBP14.18□□□□□ -0.14
CTNS-209ENST00000574776 PDE9AO76083 593 aa14.18□□□□□ -0.14
CTNS-209ENST00000574776 PTGS2P35354 604 aa14.18□□□□□ -0.14
CTNS-209ENST00000574776 GPR143P51810 404 aa14.18□□□□□ -0.14
CTNS-209ENST00000574776 HSD17B7P56937 341 aa14.18□□□□□ -0.14
CTNS-209ENST00000574776 GPR85P60893 370 aa14.18□□□□□ -0.14
CTNS-209ENST00000574776 FBXO48Q5FWF7 155 aa14.18□□□□□ -0.14
CTNS-209ENST00000574776 C16orf47Q6ZP98 133 aaPredicted RBP14.18□□□□□ -0.14
CTNS-209ENST00000574776 ADAMTSL2Q86TH1 951 aa14.18□□□□□ -0.14
CTNS-209ENST00000574776 SCUBE1Q8IWY4 988 aa14.18□□□□□ -0.14
CTNS-209ENST00000574776 CYP4Z2PQ8N1L4 340 aa14.18□□□□□ -0.14
CTNS-209ENST00000574776 KRT78Q8N1N4 520 aa14.18□□□□□ -0.14
CTNS-209ENST00000574776 FAM47BQ8NA70 645 aa14.18□□□□□ -0.14
CTNS-209ENST00000574776 TTLQ8NG68 377 aa14.18□□□□□ -0.14
CTNS-209ENST00000574776 PHF10Q8WUB8 498 aaKnown RBP14.18□□□□□ -0.14
CTNS-209ENST00000574776 VMP1Q96GC9 406 aa14.18□□□□□ -0.14
CTNS-209ENST00000574776 RUNDC3BQ96NL0 473 aa14.18□□□□□ -0.14
CTNS-209ENST00000574776 QRFPRQ96P65 431 aa14.18□□□□□ -0.14
CTNS-209ENST00000574776 RHOJQ9H4E5 214 aa14.18□□□□□ -0.14
CTNS-209ENST00000574776 NT5DC2Q9H857 520 aa14.18□□□□□ -0.14
CTNS-209ENST00000574776 SMYD2Q9NRG4 433 aa14.18□□□□□ -0.14
CTNS-209ENST00000574776 PPT2Q9UMR5 302 aa14.18□□□□□ -0.14
CTNS-209ENST00000574776 PPIEQ9UNP9 301 aaKnown RBP14.18□□□□□ -0.14
CTNS-209ENST00000574776 MTO1Q9Y2Z2 717 aaKnown RBP14.18□□□□□ -0.14
CTNS-209ENST00000574776 SNX24Q9Y343 169 aa14.18□□□□□ -0.14
CTNS-209ENST00000574776 CLDN16Q9Y5I7 305 aa14.18□□□□□ -0.14
CTNS-209ENST00000574776 HRH3Q9Y5N1 445 aa14.18□□□□□ -0.14
CTNS-209ENST00000574776 CCDC168Q8NDH2 2452 aa14.17□□□□□ -0.14
CTNS-209ENST00000574776 MYOCOSA0A1B0GUC4 107 aa14.17□□□□□ -0.14
CTNS-209ENST00000574776 ANKDD1BA6NHY2 528 aa14.17□□□□□ -0.14
CTNS-209ENST00000574776 EFCAB8A8MWE9 144 aa14.17□□□□□ -0.14
CTNS-209ENST00000574776 CDC40O60508 579 aaKnown RBP eCLIP14.17□□□□□ -0.14
CTNS-209ENST00000574776 PRAMEF4O60810 478 aa14.17□□□□□ -0.14
CTNS-209ENST00000574776 CLEC3AO75596 197 aa14.17□□□□□ -0.14
CTNS-209ENST00000574776 ZFAND5O76080 213 aa14.17□□□□□ -0.14
CTNS-209ENST00000574776 TBX6O95947 436 aaPredicted RBP14.17□□□□□ -0.14
CTNS-209ENST00000574776 TPOP07202 933 aa14.17□□□□□ -0.14
CTNS-209ENST00000574776 TFEBP19484 476 aa14.17□□□□□ -0.14
CTNS-209ENST00000574776 SLC12A2P55011 1212 aa14.17□□□□□ -0.14
CTNS-209ENST00000574776 RAB38P57729 211 aa14.17□□□□□ -0.14
CTNS-209ENST00000574776 BMPR2Q13873 1038 aa14.17□□□□□ -0.14
CTNS-209ENST00000574776 TERF2Q15554 542 aa14.17□□□□□ -0.14
CTNS-209ENST00000574776 TGFBIQ15582 683 aa14.17□□□□□ -0.14
CTNS-209ENST00000574776 CMPK2Q5EBM0 449 aa14.17□□□□□ -0.14
CTNS-209ENST00000574776 PRAMEF9Q5VWM5 478 aa14.17□□□□□ -0.14
CTNS-209ENST00000574776 ADNP2Q6IQ32 1131 aa14.17□□□□□ -0.14
CTNS-209ENST00000574776 CAPN12Q6ZSI9 719 aa14.17□□□□□ -0.14
CTNS-209ENST00000574776 VN1R5Q7Z5H4 357 aa14.17□□□□□ -0.14
CTNS-209ENST00000574776 CLNKQ7Z7G1 428 aa14.17□□□□□ -0.14
CTNS-209ENST00000574776 ZBED8Q8IZ13 594 aa14.17□□□□□ -0.14
CTNS-209ENST00000574776 OR52N2Q8NGI0 321 aa14.17□□□□□ -0.14
CTNS-209ENST00000574776 C16orf52Q8NHV5 167 aa14.17□□□□□ -0.14
CTNS-209ENST00000574776 FAM57AQ8TBR7 257 aa14.17□□□□□ -0.14
CTNS-209ENST00000574776 CA5BP1Q8WTZ4 195 aa14.17□□□□□ -0.14
CTNS-209ENST00000574776 SREK1Q8WXA9 508 aaKnown RBP14.17□□□□□ -0.14
CTNS-209ENST00000574776 ESAMQ96AP7 390 aa14.17□□□□□ -0.14
CTNS-209ENST00000574776 SDCCAG3Q96C92 435 aa14.17□□□□□ -0.14
CTNS-209ENST00000574776 CCDC77Q9BR77 488 aa14.17□□□□□ -0.14
CTNS-209ENST00000574776 MCMBPQ9BTE3 642 aa14.17□□□□□ -0.14
CTNS-209ENST00000574776 CAPS2Q9BXY5 557 aa14.17□□□□□ -0.14
CTNS-209ENST00000574776 DERL2Q9GZP9 239 aa14.17□□□□□ -0.14
CTNS-209ENST00000574776 REXO4Q9GZR2 422 aaKnown RBP14.17□□□□□ -0.14
CTNS-209ENST00000574776 KCNF1Q9H3M0 494 aa14.17□□□□□ -0.14
CTNS-209ENST00000574776 CAB39LQ9H9S4 337 aa14.17□□□□□ -0.14
CTNS-209ENST00000574776 NSMCE4AQ9NXX6 385 aa14.17□□□□□ -0.14
CTNS-209ENST00000574776 KCMF1Q9P0J7 381 aa14.17□□□□□ -0.14
CTNS-209ENST00000574776 ITGB1BP2Q9UKP3 347 aa14.17□□□□□ -0.14
CTNS-209ENST00000574776 ZNF490Q9ULM2 529 aaPredicted RBP14.17□□□□□ -0.14
CTNS-209ENST00000574776 ERVK-11Q9UQG0 969 aa14.17□□□□□ -0.14
CTNS-209ENST00000574776 YARS2Q9Y2Z4 477 aaKnown RBP14.17□□□□□ -0.14
CTNS-209ENST00000574776 A0A088AWK7 358 aa14.16□□□□□ -0.14
CTNS-209ENST00000574776 TMEM200CA6NKL6 621 aa14.16□□□□□ -0.14
CTNS-209ENST00000574776 USP27XA6NNY8 438 aa14.16□□□□□ -0.14
CTNS-209ENST00000574776 CXorf49A8MYA2 514 aaPredicted RBP14.16□□□□□ -0.14
CTNS-209ENST00000574776 E7ESA3 106 aa14.16□□□□□ -0.14
CTNS-209ENST00000574776 CYR61O00622 381 aa14.16□□□□□ -0.14
CTNS-209ENST00000574776 CLGNO14967 610 aa14.16□□□□□ -0.14
CTNS-209ENST00000574776 IFNA16P05015 189 aa14.16□□□□□ -0.14
CTNS-209ENST00000574776 CCDC166P0CW27 439 aa14.16□□□□□ -0.14
CTNS-209ENST00000574776 ZNF10P21506 573 aaPredicted RBP14.16□□□□□ -0.14
CTNS-209ENST00000574776 SSTR2P30874 369 aa14.16□□□□□ -0.14
CTNS-209ENST00000574776 RPL21P46778 160 aaKnown RBP14.16□□□□□ -0.14
CTNS-209ENST00000574776 HSPA7P48741 367 aa14.16□□□□□ -0.14
CTNS-209ENST00000574776 SSR4P51571 173 aa14.16□□□□□ -0.14
CTNS-209ENST00000574776 LIM2P55344 173 aa14.16□□□□□ -0.14
CTNS-209ENST00000574776 KRTAP10-9P60411 292 aa14.16□□□□□ -0.14
CTNS-209ENST00000574776 GNG11P61952 73 aa14.16□□□□□ -0.14
CTNS-209ENST00000574776 MRPS25P82663 173 aaKnown RBP14.16□□□□□ -0.14
CTNS-209ENST00000574776 POU4F1Q01851 419 aa14.16□□□□□ -0.14
CTNS-209ENST00000574776 XKR6Q5GH73 641 aa14.16□□□□□ -0.14
CTNS-209ENST00000574776 TRIM40Q6P9F5 258 aa14.16□□□□□ -0.14
CTNS-209ENST00000574776 ABHD17CQ6PCB6 329 aa14.16□□□□□ -0.14
CTNS-209ENST00000574776 CEP128Q6ZU80 1094 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms