RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 PRRT2Q7Z6L0 340 aaPredicted RBP13.82□□□□□ -0.2
SMG6-215ENST00000574501 CPA6Q8N4T0 437 aa13.82□□□□□ -0.2
SMG6-215ENST00000574501 DUSP18Q8NEJ0 188 aa13.82□□□□□ -0.2
SMG6-215ENST00000574501 CHTF18Q8WVB6 975 aa13.82□□□□□ -0.2
SMG6-215ENST00000574501 HHIPQ96QV1 700 aa13.82□□□□□ -0.2
SMG6-215ENST00000574501 NELL2Q99435 816 aa13.82□□□□□ -0.2
SMG6-215ENST00000574501 SLC29A3Q9BZD2 475 aa13.82□□□□□ -0.2
SMG6-215ENST00000574501 SH3BP4Q9P0V3 963 aa13.82□□□□□ -0.2
SMG6-215ENST00000574501 ELF5Q9UKW6 265 aaPredicted RBP13.82□□□□□ -0.2
SMG6-215ENST00000574501 KCNE2Q9Y6J6 123 aa13.82□□□□□ -0.2
SMG6-215ENST00000574501 ZAR1LA6NP61 321 aa13.81□□□□□ -0.2
SMG6-215ENST00000574501 ISM1B1AKI9 464 aa13.81□□□□□ -0.2
SMG6-215ENST00000574501 TPPPO94811 219 aa13.81□□□□□ -0.2
SMG6-215ENST00000574501 SOX14O95416 240 aa13.81□□□□□ -0.2
SMG6-215ENST00000574501 FAM157BP0CG42 384 aa13.81□□□□□ -0.2
SMG6-215ENST00000574501 DDCP20711 480 aa13.81□□□□□ -0.2
SMG6-215ENST00000574501 PRPS1L1P21108 318 aa13.81□□□□□ -0.2
SMG6-215ENST00000574501 HOXD9P28356 352 aaPredicted RBP13.81□□□□□ -0.2
SMG6-215ENST00000574501 CRATP43155 626 aa13.81□□□□□ -0.2
SMG6-215ENST00000574501 CRISP1P54107 249 aa13.81□□□□□ -0.2
SMG6-215ENST00000574501 IL18Q14116 193 aa13.81□□□□□ -0.2
SMG6-215ENST00000574501 MFSD13AQ14CX5 517 aa13.81□□□□□ -0.2
SMG6-215ENST00000574501 RGNQ15493 299 aa13.81□□□□□ -0.2
SMG6-215ENST00000574501 MFSD14CQ5VZR4 134 aa13.81□□□□□ -0.2
SMG6-215ENST00000574501 FRMPD2BQ6IN97 320 aa13.81□□□□□ -0.2
SMG6-215ENST00000574501 CNIH2Q6PI25 160 aa13.81□□□□□ -0.2
SMG6-215ENST00000574501 ZNF598Q86UK7 904 aaKnown RBP13.81□□□□□ -0.2
SMG6-215ENST00000574501 SDR16C5Q8N3Y7 309 aa13.81□□□□□ -0.2
SMG6-215ENST00000574501 TMEM145Q8NBT3 493 aa13.81□□□□□ -0.2
SMG6-215ENST00000574501 KLHL6Q8WZ60 621 aa13.81□□□□□ -0.2
SMG6-215ENST00000574501 AKAP1Q92667 903 aaKnown RBP eCLIP13.81□□□□□ -0.24e-7■■■■□ 26
SMG6-215ENST00000574501 CMTM7Q96FZ5 175 aa13.81□□□□□ -0.2
SMG6-215ENST00000574501 MAGEB10Q96LZ2 347 aaPredicted RBP13.81□□□□□ -0.2
SMG6-215ENST00000574501 MND1Q9BWT6 205 aa13.81□□□□□ -0.2
SMG6-215ENST00000574501 KATNBL1Q9H079 304 aa13.81□□□□□ -0.2
SMG6-215ENST00000574501 CHST8Q9H2A9 424 aa13.81□□□□□ -0.2
SMG6-215ENST00000574501 ANKRA2Q9H9E1 313 aa13.81□□□□□ -0.2
SMG6-215ENST00000574501 SLC25A19Q9HC21 320 aa13.81□□□□□ -0.2
SMG6-215ENST00000574501 FTSJ1Q9UET6 329 aa13.81□□□□□ -0.2
SMG6-215ENST00000574501 MGAT4AQ9UM21 535 aa13.81□□□□□ -0.2
SMG6-215ENST00000574501 MYO16Q9Y6X6 1858 aa13.81□□□□□ -0.2
SMG6-215ENST00000574501 ORC5O43913 435 aa13.81□□□□□ -0.2
SMG6-215ENST00000574501 HPGDSO60760 199 aa13.81□□□□□ -0.2
SMG6-215ENST00000574501 PSIP1O75475 530 aaKnown RBP13.81□□□□□ -0.2
SMG6-215ENST00000574501 IL1AP01583 271 aa13.81□□□□□ -0.2
SMG6-215ENST00000574501 ZNF865P0CJ78 1059 aaPredicted RBP13.81□□□□□ -0.2
SMG6-215ENST00000574501 MAPK1P28482 360 aa13.81□□□□□ -0.2
SMG6-215ENST00000574501 ALDH9A1P49189 494 aa13.81□□□□□ -0.2
SMG6-215ENST00000574501 YBEYP58557 167 aaPredicted RBP13.81□□□□□ -0.2
SMG6-215ENST00000574501 ABRQ12979 859 aa13.81□□□□□ -0.2
SMG6-215ENST00000574501 GAB1Q13480 694 aa13.81□□□□□ -0.2
SMG6-215ENST00000574501 SUZ12Q15022 739 aaKnown RBP13.81□□□□□ -0.2
SMG6-215ENST00000574501 ZNF284Q2VY69 593 aa13.81□□□□□ -0.2
SMG6-215ENST00000574501 IFI44LQ53G44 452 aa13.81□□□□□ -0.2
SMG6-215ENST00000574501 CCNJQ5T5M9 372 aa13.81□□□□□ -0.2
SMG6-215ENST00000574501 COMMD7Q86VX2 200 aa13.81□□□□□ -0.2
SMG6-215ENST00000574501 MON1AQ86VX9 555 aa13.81□□□□□ -0.2
SMG6-215ENST00000574501 SERPINA9Q86WD7 417 aa13.81□□□□□ -0.2
SMG6-215ENST00000574501 STK40Q8N2I9 435 aa13.81□□□□□ -0.2
SMG6-215ENST00000574501 ZNF431Q8TF32 576 aaPredicted RBP13.81□□□□□ -0.2
SMG6-215ENST00000574501 EID2BQ96D98 161 aa13.81□□□□□ -0.2
SMG6-215ENST00000574501 ACER3Q9NUN7 267 aa13.81□□□□□ -0.2
SMG6-215ENST00000574501 MBLAC1A4D2B0 266 aaPredicted RBP13.8□□□□□ -0.2
SMG6-215ENST00000574501 DRGXA6NNA5 263 aa13.8□□□□□ -0.2
SMG6-215ENST00000574501 INMT-MINDY4F8WBC2 141 aa13.8□□□□□ -0.2
SMG6-215ENST00000574501 GLULP15104 373 aa13.8□□□□□ -0.2
SMG6-215ENST00000574501 DGKAP23743 735 aa13.8□□□□□ -0.2
SMG6-215ENST00000574501 ATN1P54259 1190 aaPredicted RBP13.8□□□□□ -0.2
SMG6-215ENST00000574501 SRSF11Q05519 484 aaKnown RBP13.8□□□□□ -0.2
SMG6-215ENST00000574501 LRRC32Q14392 662 aa13.8□□□□□ -0.2
SMG6-215ENST00000574501 ZNF792Q3KQV3 632 aa13.8□□□□□ -0.2
SMG6-215ENST00000574501 ZNF628Q5EBL2 1059 aa13.8□□□□□ -0.2
SMG6-215ENST00000574501 COX20Q5RI15 118 aa13.8□□□□□ -0.2
SMG6-215ENST00000574501 ALG1LQ6GMV1 187 aa13.8□□□□□ -0.2
SMG6-215ENST00000574501 HSDL2Q6YN16 418 aa13.8□□□□□ -0.2
SMG6-215ENST00000574501 USP30Q70CQ3 517 aa13.8□□□□□ -0.2
SMG6-215ENST00000574501 C16orf62Q7Z3J2 963 aa13.8□□□□□ -0.2
SMG6-215ENST00000574501 LAS2Q8IYD9 372 aa13.8□□□□□ -0.2
SMG6-215ENST00000574501 NANOGP1Q8N7R0 232 aa13.8□□□□□ -0.2
SMG6-215ENST00000574501 FAM46DQ8NEK8 389 aa13.8□□□□□ -0.2
SMG6-215ENST00000574501 OR52P1PQ8NH57 321 aa13.8□□□□□ -0.2
SMG6-215ENST00000574501 PSKH2Q96QS6 385 aa13.8□□□□□ -0.2
SMG6-215ENST00000574501 MARVELD1Q9BSK0 173 aa13.8□□□□□ -0.2
SMG6-215ENST00000574501 KATNB1Q9BVA0 655 aa13.8□□□□□ -0.2
SMG6-215ENST00000574501 FAM105AQ9NUU6 356 aa13.8□□□□□ -0.2
SMG6-215ENST00000574501 ALPK3Q96L96 1907 aa13.8□□□□□ -0.2
SMG6-215ENST00000574501 GTPBP1O00178 669 aaKnown RBP13.8□□□□□ -0.2
SMG6-215ENST00000574501 TLR4O00206 839 aa13.8□□□□□ -0.2
SMG6-215ENST00000574501 C1SP09871 688 aa13.8□□□□□ -0.2
SMG6-215ENST00000574501 ETFAP13804 333 aa13.8□□□□□ -0.2
SMG6-215ENST00000574501 GRK4P32298 578 aa13.8□□□□□ -0.2
SMG6-215ENST00000574501 AGFG1P52594 562 aaKnown RBP13.8□□□□□ -0.2
SMG6-215ENST00000574501 CACNG1Q06432 222 aa13.8□□□□□ -0.2
SMG6-215ENST00000574501 FCN2Q15485 313 aa13.8□□□□□ -0.2
SMG6-215ENST00000574501 ZXDCQ2QGD7 858 aaPredicted RBP13.8□□□□□ -0.2
SMG6-215ENST00000574501 SPDYE7PQ495Y7 208 aa13.8□□□□□ -0.2
SMG6-215ENST00000574501 MPPE1Q53F39 396 aa13.8□□□□□ -0.2
SMG6-215ENST00000574501 DENND1CQ8IV53 801 aa13.8□□□□□ -0.2
SMG6-215ENST00000574501 FAM9CQ8IZT9 166 aa13.8□□□□□ -0.2
SMG6-215ENST00000574501 CLDN22Q8N7P3 220 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms