RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 SH3BGRLO75368 114 aa12.05□□□□□ -0.48
TRAPPC1-206ENST00000573989 SEMA3DO95025 777 aa12.05□□□□□ -0.48
TRAPPC1-206ENST00000573989 TBX6O95947 436 aaPredicted RBP12.05□□□□□ -0.48
TRAPPC1-206ENST00000573989 PDYNP01213 254 aa12.05□□□□□ -0.48
TRAPPC1-206ENST00000573989 FURINP09958 794 aa12.05□□□□□ -0.48
TRAPPC1-206ENST00000573989 C8orf89P0DMQ9 161 aa12.05□□□□□ -0.48
TRAPPC1-206ENST00000573989 SFTPCP11686 197 aa12.05□□□□□ -0.48
TRAPPC1-206ENST00000573989 NEFHP12036 1026 aa12.05□□□□□ -0.48
TRAPPC1-206ENST00000573989 ACPPP15309 386 aa12.05□□□□□ -0.48
TRAPPC1-206ENST00000573989 CERS1P27544 350 aa12.05□□□□□ -0.48
TRAPPC1-206ENST00000573989 RAB38P57729 211 aa12.05□□□□□ -0.48
TRAPPC1-206ENST00000573989 OLR1P78380 273 aa12.05□□□□□ -0.48
TRAPPC1-206ENST00000573989 GALNT1Q10472 559 aaPredicted RBP12.05□□□□□ -0.48
TRAPPC1-206ENST00000573989 CSTF3Q12996 717 aaKnown RBP12.05□□□□□ -0.48
TRAPPC1-206ENST00000573989 ATP1A4Q13733 1029 aa12.05□□□□□ -0.48
TRAPPC1-206ENST00000573989 TBR1Q16650 682 aa12.05□□□□□ -0.48
TRAPPC1-206ENST00000573989 SGO1Q5FBB7 561 aa12.05□□□□□ -0.48
TRAPPC1-206ENST00000573989 AGBL2Q5U5Z8 902 aa12.05□□□□□ -0.48
TRAPPC1-206ENST00000573989 NUDT13Q86X67 352 aa12.05□□□□□ -0.48
TRAPPC1-206ENST00000573989 APLFQ8IW19 511 aaPredicted RBP12.05□□□□□ -0.48
TRAPPC1-206ENST00000573989 CA13Q8N1Q1 262 aa12.05□□□□□ -0.48
TRAPPC1-206ENST00000573989 GBP7Q8N8V2 638 aaPredicted RBP12.05□□□□□ -0.48
TRAPPC1-206ENST00000573989 ACOT4Q8N9L9 421 aa12.05□□□□□ -0.48
TRAPPC1-206ENST00000573989 CLEC1AQ8NC01 280 aa12.05□□□□□ -0.48
TRAPPC1-206ENST00000573989 C7orf57Q8NEG2 295 aa12.05□□□□□ -0.48
TRAPPC1-206ENST00000573989 OR5T3Q8NGG3 340 aa12.05□□□□□ -0.48
TRAPPC1-206ENST00000573989 EXTL1Q92935 676 aa12.05□□□□□ -0.48
TRAPPC1-206ENST00000573989 WBP1Q96G27 269 aa12.05□□□□□ -0.48
TRAPPC1-206ENST00000573989 QRFPRQ96P65 431 aa12.05□□□□□ -0.48
TRAPPC1-206ENST00000573989 GATA5Q9BWX5 397 aaPredicted RBP12.05□□□□□ -0.48
TRAPPC1-206ENST00000573989 ACBD3Q9H3P7 528 aa12.05□□□□□ -0.48
TRAPPC1-206ENST00000573989 LYRM4Q9HD34 91 aa12.05□□□□□ -0.48
TRAPPC1-206ENST00000573989 PRDM7Q9NQW5 492 aa12.05□□□□□ -0.48
TRAPPC1-206ENST00000573989 P4HTMQ9NXG6 502 aa12.05□□□□□ -0.48
TRAPPC1-206ENST00000573989 MS4A12Q9NXJ0 267 aa12.05□□□□□ -0.48
TRAPPC1-206ENST00000573989 ZNF225Q9UK10 706 aa12.05□□□□□ -0.48
TRAPPC1-206ENST00000573989 KCNMB2Q9Y691 235 aa12.05□□□□□ -0.48
TRAPPC1-206ENST00000573989 ARHGAP10A1A4S6 786 aa12.04□□□□□ -0.48
TRAPPC1-206ENST00000573989 ARGFXA6NJG6 315 aa12.04□□□□□ -0.48
TRAPPC1-206ENST00000573989 C4orf51C9J302 202 aa12.04□□□□□ -0.48
TRAPPC1-206ENST00000573989 SAP18O00422 153 aaKnown RBP12.04□□□□□ -0.48
TRAPPC1-206ENST00000573989 MANBAO00462 879 aa12.04□□□□□ -0.48
TRAPPC1-206ENST00000573989 PLPP1O14494 284 aa12.04□□□□□ -0.48
TRAPPC1-206ENST00000573989 PRMT3O60678 531 aa12.04□□□□□ -0.48
TRAPPC1-206ENST00000573989 SCELO95171 688 aa12.04□□□□□ -0.48
TRAPPC1-206ENST00000573989 CHEK2O96017 543 aa12.04□□□□□ -0.48
TRAPPC1-206ENST00000573989 B3GALT4O96024 378 aa12.04□□□□□ -0.48
TRAPPC1-206ENST00000573989 BPGMP07738 259 aa12.04□□□□□ -0.48
TRAPPC1-206ENST00000573989 UROSP10746 265 aa12.04□□□□□ -0.48
TRAPPC1-206ENST00000573989 HIST1H1TP22492 207 aaPredicted RBP12.04□□□□□ -0.48
TRAPPC1-206ENST00000573989 ATP5A1P25705 553 aaKnown RBP12.04□□□□□ -0.48
TRAPPC1-206ENST00000573989 TLX1P31314 330 aaPredicted RBP12.04□□□□□ -0.48
TRAPPC1-206ENST00000573989 ETV4P43268 484 aa12.04□□□□□ -0.48
TRAPPC1-206ENST00000573989 SERPINB4P48594 390 aa12.04□□□□□ -0.48
TRAPPC1-206ENST00000573989 MAGOHP61326 146 aaKnown RBP12.04□□□□□ -0.48
TRAPPC1-206ENST00000573989 AP2B1P63010 937 aa12.04□□□□□ -0.48
TRAPPC1-206ENST00000573989 SNRPNP63162 240 aaKnown RBP12.04□□□□□ -0.48
TRAPPC1-206ENST00000573989 HHATQ5VTY9 493 aa12.04□□□□□ -0.48
TRAPPC1-206ENST00000573989 IRAK1BP1Q5VVH5 260 aa12.04□□□□□ -0.48
TRAPPC1-206ENST00000573989 CYP20A1Q6UW02 462 aa12.04□□□□□ -0.48
TRAPPC1-206ENST00000573989 QSOX2Q6ZRP7 698 aa12.04□□□□□ -0.48
TRAPPC1-206ENST00000573989 PPP1R32Q7Z5V6 425 aa12.04□□□□□ -0.48
TRAPPC1-206ENST00000573989 LAPTM4BQ86VI4 370 aa12.04□□□□□ -0.48
TRAPPC1-206ENST00000573989 ZNF595Q8IYB9 648 aa12.04□□□□□ -0.48
TRAPPC1-206ENST00000573989 ZCCHC7Q8N3Z6 543 aaKnown RBP12.04□□□□□ -0.48
TRAPPC1-206ENST00000573989 RNF175Q8N4F7 328 aa12.04□□□□□ -0.48
TRAPPC1-206ENST00000573989 LSM14AQ8ND56 463 aaKnown RBP12.04□□□□□ -0.48
TRAPPC1-206ENST00000573989 PLPP5Q8NEB5 264 aa12.04□□□□□ -0.48
TRAPPC1-206ENST00000573989 ZBTB9Q96C00 473 aa12.04□□□□□ -0.48
TRAPPC1-206ENST00000573989 MECRQ9BV79 373 aa12.04□□□□□ -0.48
TRAPPC1-206ENST00000573989 VN1R1Q9GZP7 353 aa12.04□□□□□ -0.48
TRAPPC1-206ENST00000573989 ING2Q9H160 280 aa12.04□□□□□ -0.48
TRAPPC1-206ENST00000573989 ADNPQ9H2P0 1102 aa12.04□□□□□ -0.48
TRAPPC1-206ENST00000573989 LYARQ9NX58 379 aaKnown RBP12.04□□□□□ -0.48
TRAPPC1-206ENST00000573989 NKIRAS1Q9NYS0 192 aa12.04□□□□□ -0.48
TRAPPC1-206ENST00000573989 PHF11Q9UIL8 331 aa12.04□□□□□ -0.48
TRAPPC1-206ENST00000573989 ADAM29Q9UKF5 820 aa12.04□□□□□ -0.48
TRAPPC1-206ENST00000573989 DAPP1Q9UN19 280 aa12.04□□□□□ -0.48
TRAPPC1-206ENST00000573989 SLC12A4Q9UP95 1085 aa12.04□□□□□ -0.48
TRAPPC1-206ENST00000573989 MMACHCQ9Y4U1 282 aa12.04□□□□□ -0.48
TRAPPC1-206ENST00000573989 HS3ST3B1Q9Y662 390 aa12.04□□□□□ -0.48
TRAPPC1-206ENST00000573989 A0A1B0GTL3 188 aa12.03□□□□□ -0.48
TRAPPC1-206ENST00000573989 MKRN2OSH3BPM6 223 aa12.03□□□□□ -0.48
TRAPPC1-206ENST00000573989 RTCAO00442 366 aaKnown RBP12.03□□□□□ -0.48
TRAPPC1-206ENST00000573989 SOCS6O14544 535 aa12.03□□□□□ -0.48
TRAPPC1-206ENST00000573989 B4GALT2O60909 372 aa12.03□□□□□ -0.48
TRAPPC1-206ENST00000573989 GUCY1B2O75343 617 aa12.03□□□□□ -0.48
TRAPPC1-206ENST00000573989 JRKO75564 520 aa12.03□□□□□ -0.48
TRAPPC1-206ENST00000573989 CDC123O75794 336 aaPredicted RBP12.03□□□□□ -0.48
TRAPPC1-206ENST00000573989 SNUPNO95149 360 aaKnown RBP12.03□□□□□ -0.48
TRAPPC1-206ENST00000573989 BUD31P41223 144 aaPredicted RBP12.03□□□□□ -0.48
TRAPPC1-206ENST00000573989 SLC18A1P54219 525 aa12.03□□□□□ -0.48
TRAPPC1-206ENST00000573989 LIM2P55344 173 aa12.03□□□□□ -0.48
TRAPPC1-206ENST00000573989 POLE2P56282 527 aa12.03□□□□□ -0.48
TRAPPC1-206ENST00000573989 HSD17B7P56937 341 aa12.03□□□□□ -0.48
TRAPPC1-206ENST00000573989 FOXL2P58012 376 aa12.03□□□□□ -0.48
TRAPPC1-206ENST00000573989 SLAMF1Q13291 335 aa12.03□□□□□ -0.48
TRAPPC1-206ENST00000573989 RUNX2Q13950 521 aa12.03□□□□□ -0.48
TRAPPC1-206ENST00000573989 NSDHLQ15738 373 aa12.03□□□□□ -0.48
TRAPPC1-206ENST00000573989 DCAF10Q5QP82 559 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms