RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 ADARP55265 1226 aaKnown RBP11.3□□□□□ -0.6
PRPF8-208ENST00000573716 PWP1Q13610 501 aa11.3□□□□□ -0.6
PRPF8-208ENST00000573716 SLC10A1Q14973 349 aa11.3□□□□□ -0.6
PRPF8-208ENST00000573716 POU4F3Q15319 338 aa11.3□□□□□ -0.6
PRPF8-208ENST00000573716 OASLQ15646 514 aaKnown RBP11.3□□□□□ -0.6
PRPF8-208ENST00000573716 HSPB2Q16082 182 aa11.3□□□□□ -0.6
PRPF8-208ENST00000573716 ZNF470Q6ECI4 717 aa11.3□□□□□ -0.6
PRPF8-208ENST00000573716 NIPAL1Q6NVV3 410 aa11.3□□□□□ -0.6
PRPF8-208ENST00000573716 NEPROQ6NW34 567 aa11.3□□□□□ -0.6
PRPF8-208ENST00000573716 CASC4Q6P4E1 433 aa11.3□□□□□ -0.6
PRPF8-208ENST00000573716 CYHR1Q6ZMK1 362 aa11.3□□□□□ -0.6
PRPF8-208ENST00000573716 KIAA0408Q6ZU52 694 aa11.3□□□□□ -0.6
PRPF8-208ENST00000573716 CILP2Q8IUL8 1156 aa11.3□□□□□ -0.6
PRPF8-208ENST00000573716 GPALPP1Q8IXQ4 340 aa11.3□□□□□ -0.6
PRPF8-208ENST00000573716 PALM2Q8IXS6 379 aa11.3□□□□□ -0.6
PRPF8-208ENST00000573716 RELL2Q8NC24 303 aaPredicted RBP11.3□□□□□ -0.6
PRPF8-208ENST00000573716 UTP15Q8TED0 518 aaKnown RBP11.3□□□□□ -0.6
PRPF8-208ENST00000573716 RNASE6Q93091 150 aaKnown RBP11.3□□□□□ -0.6
PRPF8-208ENST00000573716 CAPZA3Q96KX2 299 aa11.3□□□□□ -0.6
PRPF8-208ENST00000573716 YIPF4Q9BSR8 244 aa11.3□□□□□ -0.6
PRPF8-208ENST00000573716 KIFC1Q9BW19 673 aa11.3□□□□□ -0.6
PRPF8-208ENST00000573716 IL1RL2Q9HB29 575 aa11.3□□□□□ -0.6
PRPF8-208ENST00000573716 FBXO6Q9NRD1 293 aaPredicted RBP11.3□□□□□ -0.6
PRPF8-208ENST00000573716 INTS10Q9NVR2 710 aaKnown RBP11.3□□□□□ -0.6
PRPF8-208ENST00000573716 ADAMTS6Q9UKP5 1117 aa11.3□□□□□ -0.6
PRPF8-208ENST00000573716 VPS13CQ709C8 3753 aa11.3□□□□□ -0.6
PRPF8-208ENST00000573716 TLN2Q9Y4G6 2542 aa11.3□□□□□ -0.6
PRPF8-208ENST00000573716 TRGV5A0A0B4J1U4 118 aa11.29□□□□□ -0.6
PRPF8-208ENST00000573716 TUBAL3A6NHL2 446 aa11.29□□□□□ -0.6
PRPF8-208ENST00000573716 MIF4GDA9UHW6 222 aaKnown RBP11.29□□□□□ -0.6
PRPF8-208ENST00000573716 H7C1Q1 480 aa11.29□□□□□ -0.6
PRPF8-208ENST00000573716 GLSO94925 669 aaPredicted RBP11.29□□□□□ -0.6
PRPF8-208ENST00000573716 PAMP19021 973 aa11.29□□□□□ -0.6
PRPF8-208ENST00000573716 CNR1P21554 472 aa11.29□□□□□ -0.6
PRPF8-208ENST00000573716 WNT3P56703 355 aa11.29□□□□□ -0.6
PRPF8-208ENST00000573716 TBX2Q13207 712 aaPredicted RBP11.29□□□□□ -0.6
PRPF8-208ENST00000573716 CTBP1Q13363 440 aa11.29□□□□□ -0.6
PRPF8-208ENST00000573716 THOC5Q13769 683 aaKnown RBP11.29□□□□□ -0.6
PRPF8-208ENST00000573716 BMPR2Q13873 1038 aa11.29□□□□□ -0.6
PRPF8-208ENST00000573716 DAZAP2Q15038 168 aaPredicted RBP11.29□□□□□ -0.6
PRPF8-208ENST00000573716 KIAA0930Q6ICG6 404 aaPredicted RBP11.29□□□□□ -0.6
PRPF8-208ENST00000573716 LCTLQ6UWM7 567 aa11.29□□□□□ -0.6
PRPF8-208ENST00000573716 RTL4Q6ZR62 310 aa11.29□□□□□ -0.6
PRPF8-208ENST00000573716 P3H2Q8IVL5 708 aa11.29□□□□□ -0.6
PRPF8-208ENST00000573716 TC2NQ8N9U0 490 aa11.29□□□□□ -0.6
PRPF8-208ENST00000573716 SPATA3Q8NHX4 192 aa11.29□□□□□ -0.6
PRPF8-208ENST00000573716 LINC01560Q8TB33 94 aa11.29□□□□□ -0.6
PRPF8-208ENST00000573716 PYCR2Q96C36 320 aa11.29□□□□□ -0.6
PRPF8-208ENST00000573716 RASL10BQ96S79 203 aa11.29□□□□□ -0.6
PRPF8-208ENST00000573716 SH3GL2Q99962 352 aa11.29□□□□□ -0.6
PRPF8-208ENST00000573716 HAUS8Q9BT25 410 aa11.29□□□□□ -0.6
PRPF8-208ENST00000573716 LACRTQ9GZZ8 138 aa11.29□□□□□ -0.6
PRPF8-208ENST00000573716 SACM1LQ9NTJ5 587 aa11.29□□□□□ -0.6
PRPF8-208ENST00000573716 TRMT1Q9NXH9 659 aaKnown RBP11.29□□□□□ -0.6
PRPF8-208ENST00000573716 TUBA8Q9NY65 449 aaPredicted RBP11.29□□□□□ -0.6
PRPF8-208ENST00000573716 SPRR3Q9UBC9 169 aa11.29□□□□□ -0.6
PRPF8-208ENST00000573716 MTRF1LQ9UGC7 380 aaKnown RBP11.29□□□□□ -0.6
PRPF8-208ENST00000573716 SOX13Q9UN79 622 aa11.29□□□□□ -0.6
PRPF8-208ENST00000573716 PDE10AQ9Y233 779 aa11.29□□□□□ -0.6
PRPF8-208ENST00000573716 DHRS7Q9Y394 339 aa11.29□□□□□ -0.6
PRPF8-208ENST00000573716 MYOCOSA0A1B0GUC4 107 aa11.28□□□□□ -0.6
PRPF8-208ENST00000573716 A0A1B0GVC2 190 aa11.28□□□□□ -0.6
PRPF8-208ENST00000573716 TRBC2A0A5B9 178 aa11.28□□□□□ -0.6
PRPF8-208ENST00000573716 PABPN1LA6NDY0 278 aaKnown RBP11.28□□□□□ -0.6
PRPF8-208ENST00000573716 AP3B1O00203 1094 aa11.28□□□□□ -0.6
PRPF8-208ENST00000573716 ARHGEF9O43307 516 aa11.28□□□□□ -0.6
PRPF8-208ENST00000573716 SUSD5O60279 629 aa11.28□□□□□ -0.6
PRPF8-208ENST00000573716 P04436 131 aa11.28□□□□□ -0.6
PRPF8-208ENST00000573716 IFNA16P05015 189 aa11.28□□□□□ -0.6
PRPF8-208ENST00000573716 EPXP11678 715 aa11.28□□□□□ -0.6
PRPF8-208ENST00000573716 GABRA1P14867 456 aa11.28□□□□□ -0.6
PRPF8-208ENST00000573716 NPPBP16860 134 aa11.28□□□□□ -0.6
PRPF8-208ENST00000573716 SAT1P21673 171 aa11.28□□□□□ -0.6
PRPF8-208ENST00000573716 CCND1P24385 295 aa11.28□□□□□ -0.6
PRPF8-208ENST00000573716 PPP2R2BQ00005 443 aa11.28□□□□□ -0.6
PRPF8-208ENST00000573716 SLC13A2Q13183 592 aa11.28□□□□□ -0.6
PRPF8-208ENST00000573716 TERF2Q15554 542 aa11.28□□□□□ -0.6
PRPF8-208ENST00000573716 PHKG1Q16816 387 aa11.28□□□□□ -0.6
PRPF8-208ENST00000573716 KCTD19Q17RG1 926 aaPredicted RBP11.28□□□□□ -0.6
PRPF8-208ENST00000573716 TOR1AIP1Q5JTV8 583 aa11.28□□□□□ -0.6
PRPF8-208ENST00000573716 Q5PR19 223 aa11.28□□□□□ -0.6
PRPF8-208ENST00000573716 CATSPEREQ5SY80 951 aa11.28□□□□□ -0.6
PRPF8-208ENST00000573716 SEL1L2Q5TEA6 688 aa11.28□□□□□ -0.6
PRPF8-208ENST00000573716 SHEQ5VZ18 495 aa11.28□□□□□ -0.6
PRPF8-208ENST00000573716 ZNF549Q6P9A3 640 aa11.28□□□□□ -0.6
PRPF8-208ENST00000573716 HSDL2Q6YN16 418 aa11.28□□□□□ -0.6
PRPF8-208ENST00000573716 CLNKQ7Z7G1 428 aa11.28□□□□□ -0.6
PRPF8-208ENST00000573716 KIAA1328Q86T90 577 aa11.28□□□□□ -0.6
PRPF8-208ENST00000573716 SLC13A5Q86YT5 568 aaPredicted RBP11.28□□□□□ -0.6
PRPF8-208ENST00000573716 KRTAP1-3Q8IUG1 177 aa11.28□□□□□ -0.6
PRPF8-208ENST00000573716 DENND6AQ8IWF6 608 aa11.28□□□□□ -0.6
PRPF8-208ENST00000573716 CA13Q8N1Q1 262 aa11.28□□□□□ -0.6
PRPF8-208ENST00000573716 CIARTQ8N365 385 aaPredicted RBP11.28□□□□□ -0.6
PRPF8-208ENST00000573716 NT5CQ8TCD5 201 aa11.28□□□□□ -0.6
PRPF8-208ENST00000573716 CD200R1Q8TD46 325 aa11.28□□□□□ -0.6
PRPF8-208ENST00000573716 KCNJ9Q92806 393 aa11.28□□□□□ -0.6
PRPF8-208ENST00000573716 KIAA1191Q96A73 305 aa11.28□□□□□ -0.6
PRPF8-208ENST00000573716 SCYL1Q96KG9 808 aa11.28□□□□□ -0.6
PRPF8-208ENST00000573716 TSNARE1Q96NA8 513 aa11.28□□□□□ -0.6
PRPF8-208ENST00000573716 SGPP1Q9BX95 441 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms