RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 RBCK1Q9BYM8 510 aa6□□□□□ -1.45
HERPUD1-217ENST00000569429 SLITRK2Q9H156 845 aa6□□□□□ -1.45
HERPUD1-217ENST00000569429 LIN28AQ9H9Z2 209 aaKnown RBP6□□□□□ -1.45
HERPUD1-217ENST00000569429 UTP6Q9NYH9 597 aaKnown RBP6□□□□□ -1.45
HERPUD1-217ENST00000569429 AIPL1Q9NZN9 384 aa6□□□□□ -1.45
HERPUD1-217ENST00000569429 CIDEBQ9UHD4 219 aa6□□□□□ -1.45
HERPUD1-217ENST00000569429 ARL5AQ9Y689 179 aa6□□□□□ -1.45
HERPUD1-217ENST00000569429 IKBKGQ9Y6K9 419 aa6□□□□□ -1.45
HERPUD1-217ENST00000569429 A8MUA0 341 aa5.99□□□□□ -1.45
HERPUD1-217ENST00000569429 VWC2LB2RUY7 222 aa5.99□□□□□ -1.45
HERPUD1-217ENST00000569429 CDC7O00311 574 aa5.99□□□□□ -1.45
HERPUD1-217ENST00000569429 KIF5CO60282 957 aa5.99□□□□□ -1.45
HERPUD1-217ENST00000569429 RDH16O75452 317 aa5.99□□□□□ -1.45
HERPUD1-217ENST00000569429 SMC2O95347 1197 aa5.99□□□□□ -1.45
HERPUD1-217ENST00000569429 C1QAP02745 245 aa5.99□□□□□ -1.45
HERPUD1-217ENST00000569429 FTH1P02794 183 aa5.99□□□□□ -1.45
HERPUD1-217ENST00000569429 APEHP13798 732 aaKnown RBP5.99□□□□□ -1.45
HERPUD1-217ENST00000569429 TBXA2RP21731 343 aa5.99□□□□□ -1.45
HERPUD1-217ENST00000569429 FMO4P31512 558 aa5.99□□□□□ -1.45
HERPUD1-217ENST00000569429 GMPRP36959 345 aa5.99□□□□□ -1.45
HERPUD1-217ENST00000569429 WNT3AP56704 352 aa5.99□□□□□ -1.45
HERPUD1-217ENST00000569429 IRX1P78414 480 aaPredicted RBP5.99□□□□□ -1.45
HERPUD1-217ENST00000569429 TYRO3Q06418 890 aa5.99□□□□□ -1.45
HERPUD1-217ENST00000569429 SLC10A2Q12908 348 aaPredicted RBP5.99□□□□□ -1.45
HERPUD1-217ENST00000569429 MMRN1Q13201 1228 aa5.99□□□□□ -1.45
HERPUD1-217ENST00000569429 TAF1AQ15573 450 aaPredicted RBP5.99□□□□□ -1.45
HERPUD1-217ENST00000569429 SLC1A5Q15758 541 aa5.99□□□□□ -1.45
HERPUD1-217ENST00000569429 ZNF672Q499Z4 452 aaPredicted RBP5.99□□□□□ -1.45
HERPUD1-217ENST00000569429 DCST1Q5T197 706 aa5.99□□□□□ -1.45
HERPUD1-217ENST00000569429 SLC22A10Q63ZE4 541 aa5.99□□□□□ -1.45
HERPUD1-217ENST00000569429 ANKRD34AQ69YU3 496 aa5.99□□□□□ -1.45
HERPUD1-217ENST00000569429 TMEM214Q6NUQ4 689 aaKnown RBP5.99□□□□□ -1.45
HERPUD1-217ENST00000569429 OPN5Q6U736 354 aa5.99□□□□□ -1.45
HERPUD1-217ENST00000569429 PDSS2Q86YH6 399 aa5.99□□□□□ -1.45
HERPUD1-217ENST00000569429 RAB42Q8N4Z0 105 aa5.99□□□□□ -1.45
HERPUD1-217ENST00000569429 CCNYQ8ND76 341 aa5.99□□□□□ -1.45
HERPUD1-217ENST00000569429 RAB3IL1Q8TBN0 382 aa5.99□□□□□ -1.45
HERPUD1-217ENST00000569429 ABTB1Q969K4 478 aaPredicted RBP5.99□□□□□ -1.45
HERPUD1-217ENST00000569429 RAD51AP1Q96B01 352 aa5.99□□□□□ -1.45
HERPUD1-217ENST00000569429 TUBA1CQ9BQE3 449 aa5.99□□□□□ -1.45
HERPUD1-217ENST00000569429 UGT2B28Q9BY64 529 aa5.99□□□□□ -1.45
HERPUD1-217ENST00000569429 CEP41Q9BYV8 373 aa5.99□□□□□ -1.45
HERPUD1-217ENST00000569429 FAM96AQ9H5X1 160 aa5.99□□□□□ -1.45
HERPUD1-217ENST00000569429 METTL17Q9H7H0 456 aaPredicted RBP5.99□□□□□ -1.45
HERPUD1-217ENST00000569429 PROK2Q9HC23 129 aa5.99□□□□□ -1.45
HERPUD1-217ENST00000569429 GLOD4Q9HC38 313 aa5.99□□□□□ -1.45
HERPUD1-217ENST00000569429 ANKHQ9HCJ1 492 aa5.99□□□□□ -1.45
HERPUD1-217ENST00000569429 MRPS30Q9NP92 439 aaKnown RBP5.99□□□□□ -1.45
HERPUD1-217ENST00000569429 PARVAQ9NVD7 372 aa5.99□□□□□ -1.45
HERPUD1-217ENST00000569429 CLCF1Q9UBD9 225 aa5.99□□□□□ -1.45
HERPUD1-217ENST00000569429 FAM153AQ9UHL3 310 aa5.99□□□□□ -1.45
HERPUD1-217ENST00000569429 DMGDHQ9UI17 866 aaKnown RBP5.99□□□□□ -1.45
HERPUD1-217ENST00000569429 MAPRE3Q9UPY8 281 aa5.99□□□□□ -1.45
HERPUD1-217ENST00000569429 CTNND2Q9UQB3 1225 aa5.99□□□□□ -1.45
HERPUD1-217ENST00000569429 RNF115Q9Y4L5 304 aa5.99□□□□□ -1.45
HERPUD1-217ENST00000569429 C5orf60A6NFR6 353 aa5.98□□□□□ -1.45
HERPUD1-217ENST00000569429 POM121CA8CG34 1229 aa5.98□□□□□ -1.45
HERPUD1-217ENST00000569429 EIF3FO00303 357 aaPredicted RBP5.98□□□□□ -1.45
HERPUD1-217ENST00000569429 WWP2O00308 870 aa5.98□□□□□ -1.45
HERPUD1-217ENST00000569429 HPNP05981 417 aa5.98□□□□□ -1.45
HERPUD1-217ENST00000569429 FESP07332 822 aa5.98□□□□□ -1.45
HERPUD1-217ENST00000569429 CPN1P15169 458 aa5.98□□□□□ -1.45
HERPUD1-217ENST00000569429 TCF4P15884 667 aa5.98□□□□□ -1.45
HERPUD1-217ENST00000569429 GDF1P27539 372 aa5.98□□□□□ -1.45
HERPUD1-217ENST00000569429 KCNJ5P48544 419 aa5.98□□□□□ -1.45
HERPUD1-217ENST00000569429 CDKN1CP49918 316 aaPredicted RBP5.98□□□□□ -1.45
HERPUD1-217ENST00000569429 HK2P52789 917 aa5.98□□□□□ -1.45
HERPUD1-217ENST00000569429 EIF3BP55884 814 aaKnown RBP5.98□□□□□ -1.45
HERPUD1-217ENST00000569429 BTG2P78543 158 aa5.98□□□□□ -1.45
HERPUD1-217ENST00000569429 GBE1Q04446 702 aa5.98□□□□□ -1.45
HERPUD1-217ENST00000569429 HYAL2Q12891 473 aa5.98□□□□□ -1.45
HERPUD1-217ENST00000569429 SYTL3Q4VX76 610 aa5.98□□□□□ -1.45
HERPUD1-217ENST00000569429 FAM182AQ5T1J6 154 aa5.98□□□□□ -1.45
HERPUD1-217ENST00000569429 VWA1Q6PCB0 445 aa5.98□□□□□ -1.45
HERPUD1-217ENST00000569429 TTC23LQ6PF05 361 aa5.98□□□□□ -1.45
HERPUD1-217ENST00000569429 SERPINA9Q86WD7 417 aa5.98□□□□□ -1.45
HERPUD1-217ENST00000569429 CREBRFQ8IUR6 639 aa5.98□□□□□ -1.45
HERPUD1-217ENST00000569429 SLC25A41Q8N5S1 370 aa5.98□□□□□ -1.45
HERPUD1-217ENST00000569429 SNX31Q8N9S9 440 aa5.98□□□□□ -1.45
HERPUD1-217ENST00000569429 CFAP61Q8NHU2 1237 aa5.98□□□□□ -1.45
HERPUD1-217ENST00000569429 PAQR8Q8TEZ7 354 aa5.98□□□□□ -1.45
HERPUD1-217ENST00000569429 NEUROG1Q92886 237 aa5.98□□□□□ -1.45
HERPUD1-217ENST00000569429 SMARCE1Q969G3 411 aa5.98□□□□□ -1.45
HERPUD1-217ENST00000569429 NCLNQ969V3 563 aa5.98□□□□□ -1.45
HERPUD1-217ENST00000569429 TP53INP1Q96A56 240 aa5.98□□□□□ -1.45
HERPUD1-217ENST00000569429 PGM2Q96G03 612 aa5.98□□□□□ -1.45
HERPUD1-217ENST00000569429 MRGPRX2Q96LB1 330 aa5.98□□□□□ -1.45
HERPUD1-217ENST00000569429 BTBD9Q96Q07 612 aa5.98□□□□□ -1.45
HERPUD1-217ENST00000569429 KRT12Q99456 494 aa5.98□□□□□ -1.45
HERPUD1-217ENST00000569429 NTMT1Q9BV86 223 aa5.98□□□□□ -1.45
HERPUD1-217ENST00000569429 ACAT2Q9BWD1 397 aa5.98□□□□□ -1.45
HERPUD1-217ENST00000569429 OPN3Q9H1Y3 402 aaPredicted RBP5.98□□□□□ -1.45
HERPUD1-217ENST00000569429 MMP27Q9H306 513 aa5.98□□□□□ -1.45
HERPUD1-217ENST00000569429 UBQLN3Q9H347 655 aa5.98□□□□□ -1.45
HERPUD1-217ENST00000569429 UNKLQ9H9P5 680 aaKnown RBP5.98□□□□□ -1.45
HERPUD1-217ENST00000569429 UBP1Q9NZI7 540 aa5.98□□□□□ -1.45
HERPUD1-217ENST00000569429 MYO1AQ9UBC5 1043 aa5.98□□□□□ -1.45
HERPUD1-217ENST00000569429 FETUBQ9UGM5 382 aa5.98□□□□□ -1.45
HERPUD1-217ENST00000569429 PCYOX1Q9UHG3 505 aa5.98□□□□□ -1.45
HERPUD1-217ENST00000569429 IKZF3Q9UKT9 509 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms