RNA–Protein interactions for RNA: ENST00000569357.4

TCF4-243, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-243ENST00000569357 KCNE1BA0A087WTH5 132 aa8.35□□□□□ -1.07
TCF4-243ENST00000569357 A8MV72 311 aaPredicted RBP8.35□□□□□ -1.07
TCF4-243ENST00000569357 MYO1CO00159 1063 aa8.35□□□□□ -1.07
TCF4-243ENST00000569357 NDUFS4O43181 175 aa8.35□□□□□ -1.07
TCF4-243ENST00000569357 CD5LO43866 347 aa8.35□□□□□ -1.07
TCF4-243ENST00000569357 LCMT2O60294 686 aaKnown RBP8.35□□□□□ -1.07
TCF4-243ENST00000569357 GALR3O60755 368 aaPredicted RBP8.35□□□□□ -1.07
TCF4-243ENST00000569357 AVILO75366 819 aa8.35□□□□□ -1.07
TCF4-243ENST00000569357 NDUFS3O75489 264 aa8.35□□□□□ -1.07
TCF4-243ENST00000569357 MATN4O95460 622 aa8.35□□□□□ -1.07
TCF4-243ENST00000569357 GAS8O95995 478 aa8.35□□□□□ -1.07
TCF4-243ENST00000569357 CATP04040 527 aaKnown RBP8.35□□□□□ -1.07
TCF4-243ENST00000569357 RFPL3SP0C7P2 107 aa8.35□□□□□ -1.07
TCF4-243ENST00000569357 TMEM253P0C7T8 217 aa8.35□□□□□ -1.07
TCF4-243ENST00000569357 RBP3P10745 1247 aa8.35□□□□□ -1.07
TCF4-243ENST00000569357 ALOX12P18054 663 aa8.35□□□□□ -1.07
TCF4-243ENST00000569357 CPOXP36551 454 aa8.35□□□□□ -1.07
TCF4-243ENST00000569357 EIF3EP60228 445 aaKnown RBP8.35□□□□□ -1.07
TCF4-243ENST00000569357 SKP1P63208 163 aa8.35□□□□□ -1.07
TCF4-243ENST00000569357 KCNJ2P63252 427 aa8.35□□□□□ -1.07
TCF4-243ENST00000569357 BMPR2Q13873 1038 aa8.35□□□□□ -1.07
TCF4-243ENST00000569357 CLEC12BQ2HXU8 276 aa8.35□□□□□ -1.07
TCF4-243ENST00000569357 AARS2Q5JTZ9 985 aaKnown RBP8.35□□□□□ -1.07
TCF4-243ENST00000569357 PLEKHM3Q6ZWE6 761 aa8.35□□□□□ -1.07
TCF4-243ENST00000569357 ZNF534Q76KX8 674 aa8.35□□□□□ -1.07
TCF4-243ENST00000569357 OTUD6BQ8N6M0 293 aa8.35□□□□□ -1.07
TCF4-243ENST00000569357 ZNF740Q8NDX6 193 aa8.35□□□□□ -1.07
TCF4-243ENST00000569357 NEIL3Q8TAT5 605 aa8.35□□□□□ -1.07
TCF4-243ENST00000569357 ACTL9Q8TC94 416 aa8.35□□□□□ -1.07
TCF4-243ENST00000569357 TMEM171Q8WVE6 324 aa8.35□□□□□ -1.07
TCF4-243ENST00000569357 TM4SF19Q96DZ7 209 aa8.35□□□□□ -1.07
TCF4-243ENST00000569357 PDLIM2Q96JY6 352 aa8.35□□□□□ -1.07
TCF4-243ENST00000569357 PANX2Q96RD6 677 aa8.35□□□□□ -1.07
TCF4-243ENST00000569357 REG4Q9BYZ8 158 aa8.35□□□□□ -1.07
TCF4-243ENST00000569357 FAM114A2Q9NRY5 505 aa8.35□□□□□ -1.07
TCF4-243ENST00000569357 CATSPERZQ9NTU4 200 aa8.35□□□□□ -1.07
TCF4-243ENST00000569357 KLHL28Q9NXS3 571 aa8.35□□□□□ -1.07
TCF4-243ENST00000569357 ZFATQ9P243 1243 aa8.35□□□□□ -1.07
TCF4-243ENST00000569357 MARCH4Q9P2E8 410 aaPredicted RBP8.35□□□□□ -1.07
TCF4-243ENST00000569357 MYOTQ9UBF9 498 aa8.35□□□□□ -1.07
TCF4-243ENST00000569357 ATG4BQ9Y4P1 393 aa8.35□□□□□ -1.07
TCF4-243ENST00000569357 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.35□□□□□ -1.07
TCF4-243ENST00000569357 DEFB108AA8MXU0 73 aa8.34□□□□□ -1.07
TCF4-243ENST00000569357 APOC4-APOC2K7ER74 178 aa8.34□□□□□ -1.07
TCF4-243ENST00000569357 CTIFO43310 598 aaKnown RBP8.34□□□□□ -1.07
TCF4-243ENST00000569357 TRAPPC6AO75865 159 aa8.34□□□□□ -1.07
TCF4-243ENST00000569357 APOC2P02655 101 aa8.34□□□□□ -1.07
TCF4-243ENST00000569357 PPP2R1BP30154 601 aa8.34□□□□□ -1.07
TCF4-243ENST00000569357 FMO4P31512 558 aa8.34□□□□□ -1.07
TCF4-243ENST00000569357 GRK3P35626 688 aa8.34□□□□□ -1.07
TCF4-243ENST00000569357 HNF4AP41235 474 aa8.34□□□□□ -1.07
TCF4-243ENST00000569357 SLC1A1P43005 524 aa8.34□□□□□ -1.07
TCF4-243ENST00000569357 TTPAP49638 278 aa8.34□□□□□ -1.07
TCF4-243ENST00000569357 DUSP8Q13202 625 aa8.34□□□□□ -1.07
TCF4-243ENST00000569357 SF3B4Q15427 424 aaKnown RBP eCLIP8.34□□□□□ -1.072e-6■■■■■ 28.8
TCF4-243ENST00000569357 STX1AQ16623 288 aa8.34□□□□□ -1.07
TCF4-243ENST00000569357 PHKG1Q16816 387 aa8.34□□□□□ -1.07
TCF4-243ENST00000569357 HYAL4Q2M3T9 481 aa8.34□□□□□ -1.07
TCF4-243ENST00000569357 KLHL38Q2WGJ6 581 aa8.34□□□□□ -1.07
TCF4-243ENST00000569357 LINC01559Q495D7 138 aa8.34□□□□□ -1.07
TCF4-243ENST00000569357 TSTD2Q5T7W7 516 aa8.34□□□□□ -1.07
TCF4-243ENST00000569357 PRAMEF20Q5VT98 475 aa8.34□□□□□ -1.07
TCF4-243ENST00000569357 BTLAQ7Z6A9 289 aa8.34□□□□□ -1.07
TCF4-243ENST00000569357 RCOR2Q8IZ40 523 aa8.34□□□□□ -1.07
TCF4-243ENST00000569357 ZNF441Q8N8Z8 693 aa8.34□□□□□ -1.07
TCF4-243ENST00000569357 OR52K1Q8NGK4 314 aa8.34□□□□□ -1.07
TCF4-243ENST00000569357 ZC3HAV1LQ96H79 300 aaKnown RBP8.34□□□□□ -1.07
TCF4-243ENST00000569357 ZNF778Q96MU6 729 aa8.34□□□□□ -1.07
TCF4-243ENST00000569357 NAP1L5Q96NT1 182 aaPredicted RBP8.34□□□□□ -1.07
TCF4-243ENST00000569357 SLC30A3Q99726 388 aa8.34□□□□□ -1.07
TCF4-243ENST00000569357 TIMP4Q99727 224 aa8.34□□□□□ -1.07
TCF4-243ENST00000569357 PIGQQ9BRB3 760 aa8.34□□□□□ -1.07
TCF4-243ENST00000569357 BEX2Q9BXY8 128 aa8.34□□□□□ -1.07
TCF4-243ENST00000569357 PLA2G12AQ9BZM1 189 aa8.34□□□□□ -1.07
TCF4-243ENST00000569357 CXorf56Q9H5V9 222 aa8.34□□□□□ -1.07
TCF4-243ENST00000569357 ZNF703Q9H7S9 590 aaPredicted RBP8.34□□□□□ -1.07
TCF4-243ENST00000569357 HOMER3Q9NSC5 361 aa8.34□□□□□ -1.07
TCF4-243ENST00000569357 ZNF226Q9NYT6 803 aa8.34□□□□□ -1.07
TCF4-243ENST00000569357 JKAMPQ9P055 326 aa8.34□□□□□ -1.07
TCF4-243ENST00000569357 BOKQ9UMX3 212 aaPredicted RBP8.34□□□□□ -1.07
TCF4-243ENST00000569357 ZNF148Q9UQR1 794 aa8.34□□□□□ -1.07
TCF4-243ENST00000569357 GTF3C3Q9Y5Q9 886 aa8.34□□□□□ -1.07
TCF4-243ENST00000569357 SONP18583 2426 aaKnown RBP8.33□□□□□ -1.08
TCF4-243ENST00000569357 MXRA5Q9NR99 2828 aa8.33□□□□□ -1.08
TCF4-243ENST00000569357 IGKV3D-11A0A0A0MRZ8 115 aa8.33□□□□□ -1.08
TCF4-243ENST00000569357 CD3EAPO15446 510 aaKnown RBP8.33□□□□□ -1.08
TCF4-243ENST00000569357 CEP104O60308 925 aa8.33□□□□□ -1.08
TCF4-243ENST00000569357 NIPSNAP2O75323 286 aa8.33□□□□□ -1.08
TCF4-243ENST00000569357 PSIP1O75475 530 aaKnown RBP8.33□□□□□ -1.08
TCF4-243ENST00000569357 METTL18O95568 372 aa8.33□□□□□ -1.08
TCF4-243ENST00000569357 IFNA16P05015 189 aa8.33□□□□□ -1.08
TCF4-243ENST00000569357 ZNF888P0CJ79 500 aaPredicted RBP8.33□□□□□ -1.08
TCF4-243ENST00000569357 TMIGD3P0DMS9 266 aaPredicted RBP8.33□□□□□ -1.08
TCF4-243ENST00000569357 CHRM3P20309 590 aa8.33□□□□□ -1.08
TCF4-243ENST00000569357 HRH2P25021 359 aa8.33□□□□□ -1.08
TCF4-243ENST00000569357 PSMA3P25788 255 aa8.33□□□□□ -1.08
TCF4-243ENST00000569357 GDF1P27539 372 aa8.33□□□□□ -1.08
TCF4-243ENST00000569357 GPR143P51810 404 aa8.33□□□□□ -1.08
TCF4-243ENST00000569357 WDR4P57081 412 aaKnown RBP8.33□□□□□ -1.08
TCF4-243ENST00000569357 RAB8AP61006 207 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms