RNA–Protein interactions for RNA: ENST00000569020.5

CNOT1-215, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-215ENST00000569020 SDCCAG3Q96C92 435 aa12.74□□□□□ -0.37
CNOT1-215ENST00000569020 RHBDF1Q96CC6 855 aa12.74□□□□□ -0.37
CNOT1-215ENST00000569020 MS4A6EQ96DS6 147 aa12.74□□□□□ -0.37
CNOT1-215ENST00000569020 SEC16BQ96JE7 1060 aa12.74□□□□□ -0.37
CNOT1-215ENST00000569020 AICDAQ9GZX7 198 aa12.74□□□□□ -0.37
CNOT1-215ENST00000569020 POPDC3Q9HBV1 291 aa12.74□□□□□ -0.37
CNOT1-215ENST00000569020 LRBAP50851 2863 aa12.74□□□□□ -0.37
CNOT1-215ENST00000569020 PKDREJQ9NTG1 2253 aa12.73□□□□□ -0.37
CNOT1-215ENST00000569020 HCFC1P51610 2035 aa12.73□□□□□ -0.37
CNOT1-215ENST00000569020 EML6Q6ZMW3 1958 aa12.73□□□□□ -0.37
CNOT1-215ENST00000569020 ABCA12Q86UK0 2595 aa12.73□□□□□ -0.37
CNOT1-215ENST00000569020 A0A0G2JN53 185 aa12.73□□□□□ -0.37
CNOT1-215ENST00000569020 LRIT2A6NDA9 550 aa12.73□□□□□ -0.37
CNOT1-215ENST00000569020 NCF1BA6NI72 391 aaPredicted RBP12.73□□□□□ -0.37
CNOT1-215ENST00000569020 NCF1CA8MVU1 366 aaPredicted RBP12.73□□□□□ -0.37
CNOT1-215ENST00000569020 CLGNO14967 610 aa12.73□□□□□ -0.37
CNOT1-215ENST00000569020 CLEC3AO75596 197 aa12.73□□□□□ -0.37
CNOT1-215ENST00000569020 NCF1P14598 390 aaPredicted RBP12.73□□□□□ -0.37
CNOT1-215ENST00000569020 TFEBP19484 476 aa12.73□□□□□ -0.37
CNOT1-215ENST00000569020 HNRNPH1P31943 449 aaKnown RBP12.73□□□□□ -0.37
CNOT1-215ENST00000569020 RFC3P40938 356 aa12.73□□□□□ -0.37
CNOT1-215ENST00000569020 SLC6A12P48065 614 aa12.73□□□□□ -0.37
CNOT1-215ENST00000569020 SSR4P51571 173 aa12.73□□□□□ -0.37
CNOT1-215ENST00000569020 ILF2Q12905 390 aaKnown RBP12.73□□□□□ -0.37
CNOT1-215ENST00000569020 TSNQ15631 228 aaKnown RBP12.73□□□□□ -0.37
CNOT1-215ENST00000569020 TRIM40Q6P9F5 258 aa12.73□□□□□ -0.37
CNOT1-215ENST00000569020 SLCO4C1Q6ZQN7 724 aa12.73□□□□□ -0.37
CNOT1-215ENST00000569020 FGD2Q7Z6J4 655 aa12.73□□□□□ -0.37
CNOT1-215ENST00000569020 CD163Q86VB7 1156 aa12.73□□□□□ -0.37
CNOT1-215ENST00000569020 ZNF595Q8IYB9 648 aa12.73□□□□□ -0.37
CNOT1-215ENST00000569020 TCAIMQ8N3R3 496 aa12.73□□□□□ -0.37
CNOT1-215ENST00000569020 FBXO36Q8NEA4 188 aa12.73□□□□□ -0.37
CNOT1-215ENST00000569020 CHTF18Q8WVB6 975 aa12.73□□□□□ -0.37
CNOT1-215ENST00000569020 ANKRD49Q8WVL7 239 aa12.73□□□□□ -0.37
CNOT1-215ENST00000569020 NCLNQ969V3 563 aa12.73□□□□□ -0.37
CNOT1-215ENST00000569020 C14orf79Q96F83 325 aa12.73□□□□□ -0.37
CNOT1-215ENST00000569020 CAPZA3Q96KX2 299 aa12.73□□□□□ -0.37
CNOT1-215ENST00000569020 SPOCK3Q9BQ16 436 aa12.73□□□□□ -0.37
CNOT1-215ENST00000569020 PITHD1Q9GZP4 211 aaPredicted RBP12.73□□□□□ -0.37
CNOT1-215ENST00000569020 REXO4Q9GZR2 422 aaKnown RBP12.73□□□□□ -0.37
CNOT1-215ENST00000569020 NT5DC2Q9H857 520 aa12.73□□□□□ -0.37
CNOT1-215ENST00000569020 CNOT10Q9H9A5 744 aaKnown RBP12.73□□□□□ -0.37
CNOT1-215ENST00000569020 COPS7BQ9H9Q2 264 aaPredicted RBP12.73□□□□□ -0.37
CNOT1-215ENST00000569020 ADAP2Q9NPF8 381 aa12.73□□□□□ -0.37
CNOT1-215ENST00000569020 TIMMDC1Q9NPL8 285 aa12.73□□□□□ -0.37
CNOT1-215ENST00000569020 MOCS1Q9NZB8 636 aa12.73□□□□□ -0.37
CNOT1-215ENST00000569020 GPRC5BQ9NZH0 403 aa12.73□□□□□ -0.37
CNOT1-215ENST00000569020 ITGB1BP2Q9UKP3 347 aa12.73□□□□□ -0.37
CNOT1-215ENST00000569020 PPIEQ9UNP9 301 aaKnown RBP12.73□□□□□ -0.37
CNOT1-215ENST00000569020 ERVK-11Q9UQG0 969 aa12.73□□□□□ -0.37
CNOT1-215ENST00000569020 YARS2Q9Y2Z4 477 aaKnown RBP12.73□□□□□ -0.37
CNOT1-215ENST00000569020 CSMD1Q96PZ7 3565 aa12.73□□□□□ -0.37
CNOT1-215ENST00000569020 A8MVJ9 347 aa12.72□□□□□ -0.37
CNOT1-215ENST00000569020 ADAM10O14672 748 aa12.72□□□□□ -0.37
CNOT1-215ENST00000569020 ZFAND5O76080 213 aa12.72□□□□□ -0.37
CNOT1-215ENST00000569020 SEC31AO94979 1220 aaKnown RBP12.72□□□□□ -0.37
CNOT1-215ENST00000569020 TUBB4AP04350 444 aa12.72□□□□□ -0.37
CNOT1-215ENST00000569020 CAPN3P20807 821 aa12.72□□□□□ -0.37
CNOT1-215ENST00000569020 PLA2G16P53816 162 aa12.72□□□□□ -0.37
CNOT1-215ENST00000569020 MTTPP55157 894 aa12.72□□□□□ -0.37
CNOT1-215ENST00000569020 GPR85P60893 370 aa12.72□□□□□ -0.37
CNOT1-215ENST00000569020 BMPR2Q13873 1038 aa12.72□□□□□ -0.37
CNOT1-215ENST00000569020 RCN2Q14257 317 aa12.72□□□□□ -0.37
CNOT1-215ENST00000569020 TGFBIQ15582 683 aa12.72□□□□□ -0.37
CNOT1-215ENST00000569020 C18orf21Q32NC0 220 aaPredicted RBP12.72□□□□□ -0.37
CNOT1-215ENST00000569020 TMEM211Q6ICI0 200 aa12.72□□□□□ -0.37
CNOT1-215ENST00000569020 ARHGAP11AQ6P4F7 1023 aa12.72□□□□□ -0.37
CNOT1-215ENST00000569020 PAOXQ6QHF9 649 aa12.72□□□□□ -0.37
CNOT1-215ENST00000569020 MDGA2Q7Z553 956 aa12.72□□□□□ -0.37
CNOT1-215ENST00000569020 GPALPP1Q8IXQ4 340 aa12.72□□□□□ -0.37
CNOT1-215ENST00000569020 TMEM132CQ8N3T6 1108 aa12.72□□□□□ -0.37
CNOT1-215ENST00000569020 FAM47BQ8NA70 645 aa12.72□□□□□ -0.37
CNOT1-215ENST00000569020 ZFP62Q8NB50 900 aaPredicted RBP12.72□□□□□ -0.37
CNOT1-215ENST00000569020 OR2L5Q8NG80 312 aa12.72□□□□□ -0.37
CNOT1-215ENST00000569020 SERINC2Q96SA4 455 aa12.72□□□□□ -0.37
CNOT1-215ENST00000569020 TRIM31Q9BZY9 425 aa12.72□□□□□ -0.37
CNOT1-215ENST00000569020 ENKD1Q9H0I2 346 aa12.72□□□□□ -0.37
CNOT1-215ENST00000569020 RHOJQ9H4E5 214 aa12.72□□□□□ -0.37
CNOT1-215ENST00000569020 HPF1Q9NWY4 346 aa12.72□□□□□ -0.37
CNOT1-215ENST00000569020 WWOXQ9NZC7 414 aa12.72□□□□□ -0.37
CNOT1-215ENST00000569020 KCMF1Q9P0J7 381 aa12.72□□□□□ -0.37
CNOT1-215ENST00000569020 ZNF223Q9UK11 482 aaPredicted RBP12.72□□□□□ -0.37
CNOT1-215ENST00000569020 PYCARDQ9ULZ3 195 aa12.72□□□□□ -0.37
CNOT1-215ENST00000569020 CLCA3PQ9Y6N3 262 aa12.72□□□□□ -0.37
CNOT1-215ENST00000569020 PHF3Q92576 2039 aaKnown RBP12.72□□□□□ -0.37
CNOT1-215ENST00000569020 APCP25054 2843 aa12.72□□□□□ -0.37
CNOT1-215ENST00000569020 EFCAB8A8MWE9 144 aa12.71□□□□□ -0.37
CNOT1-215ENST00000569020 CCDC188H7C350 402 aa12.71□□□□□ -0.37
CNOT1-215ENST00000569020 ACOT7O00154 380 aa12.71□□□□□ -0.37
CNOT1-215ENST00000569020 IFNA16P05015 189 aa12.71□□□□□ -0.37
CNOT1-215ENST00000569020 PPP2R1BP30154 601 aa12.71□□□□□ -0.37
CNOT1-215ENST00000569020 GPR143P51810 404 aa12.71□□□□□ -0.37
CNOT1-215ENST00000569020 POU4F1Q01851 419 aa12.71□□□□□ -0.37
CNOT1-215ENST00000569020 PLGLB1Q02325 96 aa12.71□□□□□ -0.37
CNOT1-215ENST00000569020 TGM3Q08188 693 aa12.71□□□□□ -0.37
CNOT1-215ENST00000569020 FASTKD3Q14CZ7 662 aaKnown RBP12.71□□□□□ -0.37
CNOT1-215ENST00000569020 ELAVL1Q15717 326 aaKnown RBP12.71□□□□□ -0.37
CNOT1-215ENST00000569020 ADPRMQ3LIE5 342 aa12.71□□□□□ -0.37
CNOT1-215ENST00000569020 CMPK2Q5EBM0 449 aa12.71□□□□□ -0.37
CNOT1-215ENST00000569020 CEP128Q6ZU80 1094 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms