RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 C9orf43Q8TAL5 461 aaPredicted RBP12.25□□□□□ -0.45
CNOT1-213ENST00000568158 METTL21AQ8WXB1 218 aa12.25□□□□□ -0.45
CNOT1-213ENST00000568158 TSLPQ969D9 159 aa12.25□□□□□ -0.45
CNOT1-213ENST00000568158 RGMAQ96B86 450 aa12.25□□□□□ -0.45
CNOT1-213ENST00000568158 REPS1Q96D71 796 aa12.25□□□□□ -0.45
CNOT1-213ENST00000568158 PTCHD1Q96NR3 888 aa12.25□□□□□ -0.45
CNOT1-213ENST00000568158 OR1F2PQ96R84 312 aa12.25□□□□□ -0.45
CNOT1-213ENST00000568158 SERINC2Q96SA4 455 aa12.25□□□□□ -0.45
CNOT1-213ENST00000568158 TBCDQ9BTW9 1192 aa12.25□□□□□ -0.45
CNOT1-213ENST00000568158 SLC25A23Q9BV35 468 aa12.25□□□□□ -0.45
CNOT1-213ENST00000568158 NUDT9Q9BW91 350 aa12.25□□□□□ -0.45
CNOT1-213ENST00000568158 NPLQ9BXD5 320 aaPredicted RBP12.25□□□□□ -0.45
CNOT1-213ENST00000568158 GSTO2Q9H4Y5 243 aa12.25□□□□□ -0.45
CNOT1-213ENST00000568158 ZNF160Q9HCG1 818 aa12.25□□□□□ -0.45
CNOT1-213ENST00000568158 NECTIN3Q9NQS3 549 aa12.25□□□□□ -0.45
CNOT1-213ENST00000568158 KCMF1Q9P0J7 381 aa12.25□□□□□ -0.45
CNOT1-213ENST00000568158 TUBD1Q9UJT1 453 aa12.25□□□□□ -0.45
CNOT1-213ENST00000568158 LOC102723996A0A087X1L8 192 aa12.24□□□□□ -0.45
CNOT1-213ENST00000568158 IGHV1-45A0A0A0MS14 117 aa12.24□□□□□ -0.45
CNOT1-213ENST00000568158 MYOCOSA0A1B0GUC4 107 aa12.24□□□□□ -0.45
CNOT1-213ENST00000568158 PSMD12O00232 456 aaPredicted RBP12.24□□□□□ -0.45
CNOT1-213ENST00000568158 FOXE1O00358 373 aaPredicted RBP12.24□□□□□ -0.45
CNOT1-213ENST00000568158 RGS16O15492 202 aaPredicted RBP12.24□□□□□ -0.45
CNOT1-213ENST00000568158 HPP00738 406 aa12.24□□□□□ -0.45
CNOT1-213ENST00000568158 PDYNP01213 254 aa12.24□□□□□ -0.45
CNOT1-213ENST00000568158 CELA2AP08217 269 aa12.24□□□□□ -0.45
CNOT1-213ENST00000568158 COX6A1P12074 109 aa12.24□□□□□ -0.45
CNOT1-213ENST00000568158 SERPINB1P30740 379 aa12.24□□□□□ -0.45
CNOT1-213ENST00000568158 HPDP32754 393 aaPredicted RBP12.24□□□□□ -0.45
CNOT1-213ENST00000568158 ATRXP46100 2492 aa12.24□□□□□ -0.45
CNOT1-213ENST00000568158 HNRNPFP52597 415 aaKnown RBP12.24□□□□□ -0.45
CNOT1-213ENST00000568158 LIM2P55344 173 aa12.24□□□□□ -0.45
CNOT1-213ENST00000568158 RAB38P57729 211 aa12.24□□□□□ -0.45
CNOT1-213ENST00000568158 TGM3Q08188 693 aa12.24□□□□□ -0.45
CNOT1-213ENST00000568158 SLAMF1Q13291 335 aa12.24□□□□□ -0.45
CNOT1-213ENST00000568158 PCOLCEQ15113 449 aa12.24□□□□□ -0.45
CNOT1-213ENST00000568158 NSDHLQ15738 373 aa12.24□□□□□ -0.45
CNOT1-213ENST00000568158 COLEC12Q5KU26 742 aa12.24□□□□□ -0.45
CNOT1-213ENST00000568158 TCHHL1Q5QJ38 904 aaPredicted RBP12.24□□□□□ -0.45
CNOT1-213ENST00000568158 BEND6Q5SZJ8 279 aaPredicted RBP12.24□□□□□ -0.45
CNOT1-213ENST00000568158 NUP210LQ5VU65 1888 aa12.24□□□□□ -0.45
CNOT1-213ENST00000568158 FRG2Q64ET8 278 aa12.24□□□□□ -0.45
CNOT1-213ENST00000568158 TCTN3Q6NUS6 607 aa12.24□□□□□ -0.45
CNOT1-213ENST00000568158 CPEB2Q7Z5Q1 589 aaKnown RBP12.24□□□□□ -0.45
CNOT1-213ENST00000568158 EXOC3L1Q86VI1 746 aa12.24□□□□□ -0.45
CNOT1-213ENST00000568158 C10orf107Q8IVU9 208 aa12.24□□□□□ -0.45
CNOT1-213ENST00000568158 GALNT16Q8N428 558 aa12.24□□□□□ -0.45
CNOT1-213ENST00000568158 ZNF843Q8N446 348 aa12.24□□□□□ -0.45
CNOT1-213ENST00000568158 CDYL2Q8N8U2 506 aa12.24□□□□□ -0.45
CNOT1-213ENST00000568158 ACOT4Q8N9L9 421 aa12.24□□□□□ -0.45
CNOT1-213ENST00000568158 CLEC1AQ8NC01 280 aa12.24□□□□□ -0.45
CNOT1-213ENST00000568158 TCP10LQ8TDR4 215 aa12.24□□□□□ -0.45
CNOT1-213ENST00000568158 CCDC126Q96EE4 140 aa12.24□□□□□ -0.45
CNOT1-213ENST00000568158 APOPT1Q96IL0 206 aa12.24□□□□□ -0.45
CNOT1-213ENST00000568158 VPS50Q96JG6 964 aa12.24□□□□□ -0.45
CNOT1-213ENST00000568158 KCNC2Q96PR1 638 aa12.24□□□□□ -0.45
CNOT1-213ENST00000568158 FAM111AQ96PZ2 611 aa12.24□□□□□ -0.45
CNOT1-213ENST00000568158 FRG2BQ96QU4 278 aa12.24□□□□□ -0.45
CNOT1-213ENST00000568158 MAPKAP1Q9BPZ7 522 aa12.24□□□□□ -0.45
CNOT1-213ENST00000568158 CENPHQ9H3R5 247 aa12.24□□□□□ -0.45
CNOT1-213ENST00000568158 ZNF552Q9H707 407 aaPredicted RBP12.24□□□□□ -0.45
CNOT1-213ENST00000568158 COPS7BQ9H9Q2 264 aaPredicted RBP12.24□□□□□ -0.45
CNOT1-213ENST00000568158 MLXIPLQ9NP71 852 aa12.24□□□□□ -0.45
CNOT1-213ENST00000568158 OXSMQ9NWU1 459 aa12.24□□□□□ -0.45
CNOT1-213ENST00000568158 PSD3Q9NYI0 1048 aa12.24□□□□□ -0.45
CNOT1-213ENST00000568158 DAPP1Q9UN19 280 aa12.24□□□□□ -0.45
CNOT1-213ENST00000568158 A0A088AWK7 358 aa12.23□□□□□ -0.45
CNOT1-213ENST00000568158 NSG1A0A0A6YYJ2 146 aa12.23□□□□□ -0.45
CNOT1-213ENST00000568158 A8MUA0 341 aa12.23□□□□□ -0.45
CNOT1-213ENST00000568158 PLPP1O14494 284 aa12.23□□□□□ -0.45
CNOT1-213ENST00000568158 UBFD1O14562 309 aaKnown RBP12.23□□□□□ -0.45
CNOT1-213ENST00000568158 PRMT3O60678 531 aa12.23□□□□□ -0.45
CNOT1-213ENST00000568158 ERLIN1O75477 346 aa12.23□□□□□ -0.45
CNOT1-213ENST00000568158 MAOAP21397 527 aa12.23□□□□□ -0.45
CNOT1-213ENST00000568158 ZNF10P21506 573 aaPredicted RBP12.23□□□□□ -0.45
CNOT1-213ENST00000568158 ITGA3P26006 1051 aa12.23□□□□□ -0.45
CNOT1-213ENST00000568158 ALDH3A1P30838 453 aa12.23□□□□□ -0.45
CNOT1-213ENST00000568158 BSGP35613 385 aa12.23□□□□□ -0.45
CNOT1-213ENST00000568158 SSR2P43308 183 aa12.23□□□□□ -0.45
CNOT1-213ENST00000568158 RAP1GDS1P52306 607 aa12.23□□□□□ -0.45
CNOT1-213ENST00000568158 SOX8P57073 446 aa12.23□□□□□ -0.45
CNOT1-213ENST00000568158 DNAJB13P59910 316 aa12.23□□□□□ -0.45
CNOT1-213ENST00000568158 PHEXP78562 749 aa12.23□□□□□ -0.45
CNOT1-213ENST00000568158 ACTN3Q08043 901 aaPredicted RBP12.23□□□□□ -0.45
CNOT1-213ENST00000568158 IFT88Q13099 833 aa12.23□□□□□ -0.45
CNOT1-213ENST00000568158 AIMP2Q13155 320 aaKnown RBP12.23□□□□□ -0.45
CNOT1-213ENST00000568158 CUL3Q13618 768 aa12.23□□□□□ -0.45
CNOT1-213ENST00000568158 ABRAXAS2Q15018 415 aa12.23□□□□□ -0.45
CNOT1-213ENST00000568158 GGTA1PQ4G0N0 100 aa12.23□□□□□ -0.45
CNOT1-213ENST00000568158 LACTB2Q53H82 288 aaPredicted RBP12.23□□□□□ -0.45
CNOT1-213ENST00000568158 SCIMPQ6UWF3 145 aa12.23□□□□□ -0.45
CNOT1-213ENST00000568158 GPRIN3Q6ZVF9 776 aa12.23□□□□□ -0.45
CNOT1-213ENST00000568158 ASB18Q6ZVZ8 466 aa12.23□□□□□ -0.45
CNOT1-213ENST00000568158 FAM47BQ8NA70 645 aa12.23□□□□□ -0.45
CNOT1-213ENST00000568158 MYRIPQ8NFW9 859 aa12.23□□□□□ -0.45
CNOT1-213ENST00000568158 RDH11Q8TC12 318 aa12.23□□□□□ -0.45
CNOT1-213ENST00000568158 METTL6Q8TCB7 284 aa12.23□□□□□ -0.45
CNOT1-213ENST00000568158 SELENOMQ8WWX9 145 aa12.23□□□□□ -0.45
CNOT1-213ENST00000568158 MARVELD3Q96A59 401 aa12.23□□□□□ -0.45
CNOT1-213ENST00000568158 THOC3Q96J01 351 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms