RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 ATOH8Q96SQ7 321 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 LRRC1Q9BTT6 524 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 EFCAB11Q9BUY7 163 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 CD244Q9BZW8 370 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 REXO4Q9GZR2 422 aaKnown RBP4.49□□□□□ -1.69
CLK3-219ENST00000567805 AICDAQ9GZX7 198 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 TSPYL1Q9H0U9 437 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 RHBGQ9H310 441 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 KLHL31Q9H511 634 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 ALG9Q9H6U8 611 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 NMRAL1Q9HBL8 299 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 ZDHHC18Q9NUE0 388 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 NUDT4Q9NZJ9 180 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 PLEKHB1Q9UF11 243 aaPredicted RBP4.49□□□□□ -1.69
CLK3-219ENST00000567805 MTRF1LQ9UGC7 380 aaKnown RBP4.49□□□□□ -1.69
CLK3-219ENST00000567805 ERRFI1Q9UJM3 462 aaPredicted RBP4.49□□□□□ -1.69
CLK3-219ENST00000567805 MRPS33Q9Y291 106 aaKnown RBP4.49□□□□□ -1.69
CLK3-219ENST00000567805 ACOT9Q9Y305 439 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 MMACHCQ9Y4U1 282 aa4.49□□□□□ -1.69
CLK3-219ENST00000567805 ICE1Q9Y2F5 2266 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 CROCCQ5TZA2 2017 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 SVILO95425 2214 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 EML6Q6ZMW3 1958 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 A0A0G2JN53 185 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 A0A1B0GUH1 482 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 ESYT3A0FGR9 886 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 FAM181BA6NEQ2 426 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 GABRR3A8MPY1 467 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 SUPT3HB4E1H0 165 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 FAM227AF5H4B4 570 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 K7EPI3 171 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 UBXN8O00124 270 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 CLDN4O14493 209 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 FCHO1O14526 889 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 B3GALT2O43825 422 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 CCNT2O60583 730 aaKnown RBP4.48□□□□□ -1.69
CLK3-219ENST00000567805 PRAMEF4O60810 478 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 SUPT3HO75486 399 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 KLHL2O95198 593 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 TBX6O95947 436 aaPredicted RBP4.48□□□□□ -1.69
CLK3-219ENST00000567805 TUBB4AP04350 444 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 C2P06681 752 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 STSP08842 583 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 RNF224P0DH78 156 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 EPB42P16452 691 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 EPORP19235 508 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 CD22P20273 847 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 MAOAP21397 527 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 SERPINB1P30740 379 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 GMPRP36959 345 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 CD96P40200 585 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 CASP2P42575 452 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 KCNC1P48547 511 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 TDGF1P3P51864 188 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 PLA2G16P53816 162 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 MTTPP55157 894 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 LIM2P55344 173 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 HSD17B7P56937 341 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 RAB38P57729 211 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 BTG2P78543 158 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 IRF8Q02556 426 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 PCDH1Q08174 1060 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 DLG1Q12959 904 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 CHIT1Q13231 466 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 TUBA3CQ13748 450 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 RUNX2Q13950 521 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 E2F2Q14209 437 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 RCN2Q14257 317 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 ACAP2Q15057 778 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 OR1C1Q15619 314 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 HIST2H2ACQ16777 129 aaPredicted RBP4.48□□□□□ -1.69
CLK3-219ENST00000567805 FAM83EQ2M2I3 478 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 TMEM35AQ53FP2 167 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 FBXO48Q5FWF7 155 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 ZNF766Q5HY98 468 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 MROH9Q5TGP6 573 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 PRAMEF9Q5VWM5 478 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 FCRLBQ6BAA4 426 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 HIST2H2AA3Q6FI13 130 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 MED27Q6P2C8 311 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 KLC3Q6P597 504 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 ABHD17CQ6PCB6 329 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 TUBA3EQ6PEY2 450 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 MAMDC2Q7Z304 686 aaPredicted RBP4.48□□□□□ -1.69
CLK3-219ENST00000567805 VN1R5Q7Z5H4 357 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 RPS19BP1Q86WX3 136 aaKnown RBP4.48□□□□□ -1.69
CLK3-219ENST00000567805 RELL1Q8IUW5 271 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 SCUBE1Q8IWY4 988 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 ZNF595Q8IYB9 648 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 LAS2Q8IYD9 372 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 CENPLQ8N0S6 344 aaPredicted RBP4.48□□□□□ -1.69
CLK3-219ENST00000567805 CYP4X1Q8N118 509 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 ARMC10Q8N2F6 343 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 MMGT1Q8N4V1 131 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 AMER2Q8N7J2 671 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 TMEM178AQ8NBL3 297 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 FAM98AQ8NCA5 519 aaKnown RBP4.48□□□□□ -1.69
CLK3-219ENST00000567805 MDS2Q8NDY4 140 aa4.48□□□□□ -1.69
CLK3-219ENST00000567805 SRFBP1Q8NEF9 429 aaKnown RBP4.48□□□□□ -1.69
CLK3-219ENST00000567805 MNS1Q8NEH6 495 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms