RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-213ENST00000567737 PIK3IP1Q96FE7 263 aa12.69□□□□□ -0.38
SMG1-213ENST00000567737 SCYL1Q96KG9 808 aa12.69□□□□□ -0.38
SMG1-213ENST00000567737 SGCZQ96LD1 299 aa12.69□□□□□ -0.38
SMG1-213ENST00000567737 RBSNQ9H1K0 784 aa12.69□□□□□ -0.38
SMG1-213ENST00000567737 ZNF703Q9H7S9 590 aaPredicted RBP12.69□□□□□ -0.38
SMG1-213ENST00000567737 SEMA4BQ9NPR2 832 aaPredicted RBP12.69□□□□□ -0.38
SMG1-213ENST00000567737 PNO1Q9NRX1 252 aaKnown RBP12.69□□□□□ -0.38
SMG1-213ENST00000567737 SLC2A6Q9UGQ3 507 aa12.69□□□□□ -0.38
SMG1-213ENST00000567737 TESMINQ9Y4I5 508 aa12.69□□□□□ -0.38
SMG1-213ENST00000567737 ATG4BQ9Y4P1 393 aa12.69□□□□□ -0.38
SMG1-213ENST00000567737 C15orf38-AP3S2A0A0A6YYH1 394 aa12.68□□□□□ -0.38
SMG1-213ENST00000567737 SPRY1O43609 319 aaPredicted RBP12.68□□□□□ -0.38
SMG1-213ENST00000567737 AVILO75366 819 aa12.68□□□□□ -0.38
SMG1-213ENST00000567737 PSIP1O75475 530 aaKnown RBP12.68□□□□□ -0.38
SMG1-213ENST00000567737 SOX30O94993 753 aa12.68□□□□□ -0.38
SMG1-213ENST00000567737 SIX3O95343 332 aaPredicted RBP12.68□□□□□ -0.38
SMG1-213ENST00000567737 SYF2O95926 243 aaKnown RBP12.68□□□□□ -0.38
SMG1-213ENST00000567737 RBP3P10745 1247 aa12.68□□□□□ -0.38
SMG1-213ENST00000567737 COILP38432 576 aaPredicted RBP12.68□□□□□ -0.38
SMG1-213ENST00000567737 PRR20EP86478 221 aa12.68□□□□□ -0.38
SMG1-213ENST00000567737 PRR20CP86479 221 aa12.68□□□□□ -0.38
SMG1-213ENST00000567737 PRR20DP86480 221 aa12.68□□□□□ -0.38
SMG1-213ENST00000567737 PRR20BP86481 221 aa12.68□□□□□ -0.38
SMG1-213ENST00000567737 PRR20AP86496 221 aa12.68□□□□□ -0.38
SMG1-213ENST00000567737 VEZF1Q14119 521 aa12.68□□□□□ -0.38
SMG1-213ENST00000567737 PARP6Q2NL67 630 aa12.68□□□□□ -0.38
SMG1-213ENST00000567737 TSTD2Q5T7W7 516 aa12.68□□□□□ -0.38
SMG1-213ENST00000567737 RNF187Q5TA31 235 aaPredicted RBP12.68□□□□□ -0.38
SMG1-213ENST00000567737 BBS12Q6ZW61 710 aa12.68□□□□□ -0.38
SMG1-213ENST00000567737 LUZP2Q86TE4 346 aa12.68□□□□□ -0.38
SMG1-213ENST00000567737 LRRC6Q86X45 466 aa12.68□□□□□ -0.38
SMG1-213ENST00000567737 PM20D2Q8IYS1 436 aa12.68□□□□□ -0.38
SMG1-213ENST00000567737 RCOR2Q8IZ40 523 aa12.68□□□□□ -0.38
SMG1-213ENST00000567737 AFAP1L2Q8N4X5 818 aa12.68□□□□□ -0.38
SMG1-213ENST00000567737 ZNF740Q8NDX6 193 aa12.68□□□□□ -0.38
SMG1-213ENST00000567737 ACTL9Q8TC94 416 aa12.68□□□□□ -0.38
SMG1-213ENST00000567737 TMEM171Q8WVE6 324 aa12.68□□□□□ -0.38
SMG1-213ENST00000567737 PDLIM2Q96JY6 352 aa12.68□□□□□ -0.38
SMG1-213ENST00000567737 TRIB1Q96RU8 372 aa12.68□□□□□ -0.38
SMG1-213ENST00000567737 HEMGNQ9BXL5 484 aa12.68□□□□□ -0.38
SMG1-213ENST00000567737 P2RY12Q9H244 342 aa12.68□□□□□ -0.38
SMG1-213ENST00000567737 ACKR4Q9NPB9 350 aa12.68□□□□□ -0.38
SMG1-213ENST00000567737 CATSPERZQ9NTU4 200 aa12.68□□□□□ -0.38
SMG1-213ENST00000567737 ZFATQ9P243 1243 aa12.68□□□□□ -0.38
SMG1-213ENST00000567737 BOKQ9UMX3 212 aaPredicted RBP12.68□□□□□ -0.38
SMG1-213ENST00000567737 PPIEQ9UNP9 301 aaKnown RBP12.68□□□□□ -0.38
SMG1-213ENST00000567737 A8MV72 311 aaPredicted RBP12.67□□□□□ -0.38
SMG1-213ENST00000567737 CTIFO43310 598 aaKnown RBP12.67□□□□□ -0.38
SMG1-213ENST00000567737 CCL3P10147 92 aa12.67□□□□□ -0.38
SMG1-213ENST00000567737 PAX1P15863 534 aa12.67□□□□□ -0.38
SMG1-213ENST00000567737 ALOX12P18054 663 aa12.67□□□□□ -0.38
SMG1-213ENST00000567737 RPS3P23396 243 aaKnown RBP eCLIP12.67□□□□□ -0.38
SMG1-213ENST00000567737 GRK3P35626 688 aa12.67□□□□□ -0.38
SMG1-213ENST00000567737 TRPC1P48995 793 aa12.67□□□□□ -0.38
SMG1-213ENST00000567737 EIF3BP55884 814 aaKnown RBP12.67□□□□□ -0.38
SMG1-213ENST00000567737 ATP5J2P56134 94 aa12.67□□□□□ -0.38
SMG1-213ENST00000567737 EIF3EP60228 445 aaKnown RBP12.67□□□□□ -0.38
SMG1-213ENST00000567737 ZBED6P86452 979 aa12.67□□□□□ -0.38
SMG1-213ENST00000567737 SLC18A3Q16572 532 aa12.67□□□□□ -0.38
SMG1-213ENST00000567737 STX1AQ16623 288 aa12.67□□□□□ -0.38
SMG1-213ENST00000567737 PLEKHM3Q6ZWE6 761 aa12.67□□□□□ -0.38
SMG1-213ENST00000567737 LINC00523Q86TU6 105 aa12.67□□□□□ -0.38
SMG1-213ENST00000567737 RHOT2Q8IXI1 618 aa12.67□□□□□ -0.38
SMG1-213ENST00000567737 NTNG2Q96CW9 530 aa12.67□□□□□ -0.38
SMG1-213ENST00000567737 CDK15Q96Q40 435 aa12.67□□□□□ -0.38
SMG1-213ENST00000567737 CXorf56Q9H5V9 222 aa12.67□□□□□ -0.38
SMG1-213ENST00000567737 QPCTLQ9NXS2 382 aa12.67□□□□□ -0.38
SMG1-213ENST00000567737 ZNF226Q9NYT6 803 aa12.67□□□□□ -0.38
SMG1-213ENST00000567737 CDC42EP3Q9UKI2 254 aa12.67□□□□□ -0.38
SMG1-213ENST00000567737 A0A1B0GTH6 734 aa12.66□□□□□ -0.38
SMG1-213ENST00000567737 MBD3L3A6NE82 208 aaPredicted RBP12.66□□□□□ -0.38
SMG1-213ENST00000567737 DEFB108AA8MXU0 73 aa12.66□□□□□ -0.38
SMG1-213ENST00000567737 NDUFS4O43181 175 aa12.66□□□□□ -0.38
SMG1-213ENST00000567737 PSMD3O43242 534 aa12.66□□□□□ -0.38
SMG1-213ENST00000567737 LCMT2O60294 686 aaKnown RBP12.66□□□□□ -0.38
SMG1-213ENST00000567737 NDUFS3O75489 264 aa12.66□□□□□ -0.38
SMG1-213ENST00000567737 RFPL3SP0C7P2 107 aa12.66□□□□□ -0.38
SMG1-213ENST00000567737 TMIGD3P0DMS9 266 aaPredicted RBP12.66□□□□□ -0.38
SMG1-213ENST00000567737 RNH1P13489 461 aaKnown RBP12.66□□□□□ -0.38
SMG1-213ENST00000567737 PIGAP37287 484 aa12.66□□□□□ -0.38
SMG1-213ENST00000567737 GPR143P51810 404 aa12.66□□□□□ -0.38
SMG1-213ENST00000567737 ACVR1Q04771 509 aa12.66□□□□□ -0.38
SMG1-213ENST00000567737 GBX1Q14549 363 aa12.66□□□□□ -0.38
SMG1-213ENST00000567737 PHKG1Q16816 387 aa12.66□□□□□ -0.38
SMG1-213ENST00000567737 CLEC12BQ2HXU8 276 aa12.66□□□□□ -0.38
SMG1-213ENST00000567737 KLHL38Q2WGJ6 581 aa12.66□□□□□ -0.38
SMG1-213ENST00000567737 OPN5Q6U736 354 aa12.66□□□□□ -0.38
SMG1-213ENST00000567737 LRRC56Q8IYG6 542 aaPredicted RBP12.66□□□□□ -0.38
SMG1-213ENST00000567737 RASGEF1CQ8N431 466 aa12.66□□□□□ -0.38
SMG1-213ENST00000567737 ZNF441Q8N8Z8 693 aa12.66□□□□□ -0.38
SMG1-213ENST00000567737 MFSD9Q8NBP5 474 aa12.66□□□□□ -0.38
SMG1-213ENST00000567737 OR52K1Q8NGK4 314 aa12.66□□□□□ -0.38
SMG1-213ENST00000567737 MBD3L2Q8NHZ7 208 aaPredicted RBP12.66□□□□□ -0.38
SMG1-213ENST00000567737 CALR3Q96L12 384 aaKnown RBP12.66□□□□□ -0.38
SMG1-213ENST00000567737 NAP1L5Q96NT1 182 aaPredicted RBP12.66□□□□□ -0.38
SMG1-213ENST00000567737 SLC30A3Q99726 388 aa12.66□□□□□ -0.38
SMG1-213ENST00000567737 REG4Q9BYZ8 158 aa12.66□□□□□ -0.38
SMG1-213ENST00000567737 RHBGQ9H310 441 aa12.66□□□□□ -0.38
SMG1-213ENST00000567737 CCDC177Q9NQR7 707 aaPredicted RBP12.66□□□□□ -0.38
SMG1-213ENST00000567737 RIMKLBQ9ULI2 386 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms