RNA–Protein interactions for RNA: ENST00000567258.1

LINC00564-201, long intergenic non-protein coding RNA 564, humanhuman

BASIC

Gene LINC00564, Length 1,119 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00564-201ENST00000567258 RNF112Q9ULX5 631 aa9.73□□□□□ -0.85
LINC00564-201ENST00000567258 PYCARDQ9ULZ3 195 aa9.73□□□□□ -0.85
LINC00564-201ENST00000567258 MTO1Q9Y2Z2 717 aaKnown RBP9.73□□□□□ -0.85
LINC00564-201ENST00000567258 PCDHGB6Q9Y5F9 930 aa9.73□□□□□ -0.85
LINC00564-201ENST00000567258 CENPEQ02224 2701 aa9.72□□□□□ -0.85
LINC00564-201ENST00000567258 CROCCQ5TZA2 2017 aa9.72□□□□□ -0.85
LINC00564-201ENST00000567258 DOPEY1Q5JWR5 2465 aa9.72□□□□□ -0.85
LINC00564-201ENST00000567258 TRGV8A0A0C4DH27 118 aa9.72□□□□□ -0.85
LINC00564-201ENST00000567258 GABRR3A8MPY1 467 aa9.72□□□□□ -0.85
LINC00564-201ENST00000567258 FAM227AF5H4B4 570 aa9.72□□□□□ -0.85
LINC00564-201ENST00000567258 E2F3O00716 465 aa9.72□□□□□ -0.85
LINC00564-201ENST00000567258 ERI3O43414 337 aaKnown RBP9.72□□□□□ -0.85
LINC00564-201ENST00000567258 RAD51CO43502 376 aa9.72□□□□□ -0.85
LINC00564-201ENST00000567258 B3GALT2O43825 422 aa9.72□□□□□ -0.85
LINC00564-201ENST00000567258 CCNT2O60583 730 aaKnown RBP9.72□□□□□ -0.85
LINC00564-201ENST00000567258 STK16O75716 305 aa9.72□□□□□ -0.85
LINC00564-201ENST00000567258 B3GALT4O96024 378 aa9.72□□□□□ -0.85
LINC00564-201ENST00000567258 STSP08842 583 aa9.72□□□□□ -0.85
LINC00564-201ENST00000567258 RNF224P0DH78 156 aa9.72□□□□□ -0.85
LINC00564-201ENST00000567258 ESRRAP11474 423 aaPredicted RBP9.72□□□□□ -0.85
LINC00564-201ENST00000567258 STX2P32856 288 aa9.72□□□□□ -0.85
LINC00564-201ENST00000567258 GDF5P43026 501 aa9.72□□□□□ -0.85
LINC00564-201ENST00000567258 PLTPP55058 493 aa9.72□□□□□ -0.85
LINC00564-201ENST00000567258 KCNK10P57789 538 aa9.72□□□□□ -0.85
LINC00564-201ENST00000567258 RAB10P61026 200 aa9.72□□□□□ -0.85
LINC00564-201ENST00000567258 MRPS25P82663 173 aaKnown RBP9.72□□□□□ -0.85
LINC00564-201ENST00000567258 ALDH6A1Q02252 535 aaKnown RBP9.72□□□□□ -0.85
LINC00564-201ENST00000567258 SLC13A2Q13183 592 aa9.72□□□□□ -0.85
LINC00564-201ENST00000567258 LAPTM5Q13571 262 aa9.72□□□□□ -0.85
LINC00564-201ENST00000567258 TUBA3CQ13748 450 aa9.72□□□□□ -0.85
LINC00564-201ENST00000567258 SLBPQ14493 270 aaKnown RBP eCLIP9.72□□□□□ -0.85
LINC00564-201ENST00000567258 SLMAPQ14BN4 828 aa9.72□□□□□ -0.85
LINC00564-201ENST00000567258 MAPKAPK3Q16644 382 aa9.72□□□□□ -0.85
LINC00564-201ENST00000567258 PDK4Q16654 411 aa9.72□□□□□ -0.85
LINC00564-201ENST00000567258 ZXDCQ2QGD7 858 aaPredicted RBP9.72□□□□□ -0.85
LINC00564-201ENST00000567258 XKR6Q5GH73 641 aa9.72□□□□□ -0.85
LINC00564-201ENST00000567258 CDKL4Q5MAI5 379 aa9.72□□□□□ -0.85
LINC00564-201ENST00000567258 GRTP1Q5TC63 336 aa9.72□□□□□ -0.85
LINC00564-201ENST00000567258 C1QL3Q5VWW1 255 aa9.72□□□□□ -0.85
LINC00564-201ENST00000567258 TUBA3EQ6PEY2 450 aa9.72□□□□□ -0.85
LINC00564-201ENST00000567258 CYS1Q717R9 158 aa9.72□□□□□ -0.85
LINC00564-201ENST00000567258 TBC1D1Q86TI0 1168 aaPredicted RBP9.72□□□□□ -0.85
LINC00564-201ENST00000567258 RPS19BP1Q86WX3 136 aaKnown RBP9.72□□□□□ -0.85
LINC00564-201ENST00000567258 SLC34A3Q8N130 599 aa9.72□□□□□ -0.85
LINC00564-201ENST00000567258 LGI4Q8N135 537 aa9.72□□□□□ -0.85
LINC00564-201ENST00000567258 SRFBP1Q8NEF9 429 aaKnown RBP9.72□□□□□ -0.85
LINC00564-201ENST00000567258 ANKRD49Q8WVL7 239 aa9.72□□□□□ -0.85
LINC00564-201ENST00000567258 EXT2Q93063 718 aa9.72□□□□□ -0.85
LINC00564-201ENST00000567258 PTCD3Q96EY7 689 aaKnown RBP9.72□□□□□ -0.85
LINC00564-201ENST00000567258 MAGED4Q96JG8 741 aa9.72□□□□□ -0.85
LINC00564-201ENST00000567258 TAAR6Q96RI8 345 aa9.72□□□□□ -0.85
LINC00564-201ENST00000567258 CCDC77Q9BR77 488 aa9.72□□□□□ -0.85
LINC00564-201ENST00000567258 EFCAB11Q9BUY7 163 aa9.72□□□□□ -0.85
LINC00564-201ENST00000567258 NPLQ9BXD5 320 aaPredicted RBP9.72□□□□□ -0.85
LINC00564-201ENST00000567258 DEFB126Q9BYW3 111 aa9.72□□□□□ -0.85
LINC00564-201ENST00000567258 UNKQ9C0B0 810 aaKnown RBP9.72□□□□□ -0.85
LINC00564-201ENST00000567258 CAB39LQ9H9S4 337 aa9.72□□□□□ -0.85
LINC00564-201ENST00000567258 ANKRD10Q9NXR5 420 aa9.72□□□□□ -0.85
LINC00564-201ENST00000567258 LRFN1Q9P244 771 aa9.72□□□□□ -0.85
LINC00564-201ENST00000567258 IKZF3Q9UKT9 509 aa9.72□□□□□ -0.85
LINC00564-201ENST00000567258 MMACHCQ9Y4U1 282 aa9.72□□□□□ -0.85
LINC00564-201ENST00000567258 SPACA6W5XKT8 324 aa9.72□□□□□ -0.85
LINC00564-201ENST00000567258 TCRBV9S1A1TA0A576 114 aa9.71□□□□□ -0.86
LINC00564-201ENST00000567258 SAGE2PA6NJ88 616 aa9.71□□□□□ -0.86
LINC00564-201ENST00000567258 A8MUA0 341 aa9.71□□□□□ -0.86
LINC00564-201ENST00000567258 CCL21O00585 134 aa9.71□□□□□ -0.86
LINC00564-201ENST00000567258 PHGDHO43175 533 aaKnown RBP9.71□□□□□ -0.86
LINC00564-201ENST00000567258 ZG16O60844 167 aa9.71□□□□□ -0.86
LINC00564-201ENST00000567258 CLEC3AO75596 197 aa9.71□□□□□ -0.86
LINC00564-201ENST00000567258 PIAS1O75925 651 aa9.71□□□□□ -0.86
LINC00564-201ENST00000567258 CLDN1O95832 211 aa9.71□□□□□ -0.86
LINC00564-201ENST00000567258 MAOAP21397 527 aa9.71□□□□□ -0.86
LINC00564-201ENST00000567258 CD96P40200 585 aa9.71□□□□□ -0.86
LINC00564-201ENST00000567258 GATA4P43694 442 aa9.71□□□□□ -0.86
LINC00564-201ENST00000567258 SLC6A12P48065 614 aa9.71□□□□□ -0.86
LINC00564-201ENST00000567258 HSPA7P48741 367 aa9.71□□□□□ -0.86
LINC00564-201ENST00000567258 CYB561P49447 251 aa9.71□□□□□ -0.86
LINC00564-201ENST00000567258 CLCN2P51788 898 aa9.71□□□□□ -0.86
LINC00564-201ENST00000567258 EFNA3P52797 238 aa9.71□□□□□ -0.86
LINC00564-201ENST00000567258 BTG2P78543 158 aa9.71□□□□□ -0.86
LINC00564-201ENST00000567258 CKAP4Q07065 602 aaKnown RBP9.71□□□□□ -0.86
LINC00564-201ENST00000567258 NAA30Q147X3 362 aaPredicted RBP9.71□□□□□ -0.86
LINC00564-201ENST00000567258 ZRSR2Q15696 482 aaKnown RBP9.71□□□□□ -0.86
LINC00564-201ENST00000567258 KRTCAP3Q53RY4 240 aa9.71□□□□□ -0.86
LINC00564-201ENST00000567258 ZNF324BQ6AW86 544 aaPredicted RBP9.71□□□□□ -0.86
LINC00564-201ENST00000567258 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.71□□□□□ -0.86
LINC00564-201ENST00000567258 KLHDC8AQ8IYD2 350 aa9.71□□□□□ -0.86
LINC00564-201ENST00000567258 CA13Q8N1Q1 262 aa9.71□□□□□ -0.86
LINC00564-201ENST00000567258 SPATA6LQ8N4H0 392 aa9.71□□□□□ -0.86
LINC00564-201ENST00000567258 PPM1NQ8N819 430 aa9.71□□□□□ -0.86
LINC00564-201ENST00000567258 STAG3L4Q8TBR4 150 aa9.71□□□□□ -0.86
LINC00564-201ENST00000567258 CREB3L4Q8TEY5 395 aa9.71□□□□□ -0.86
LINC00564-201ENST00000567258 UBE2E3Q969T4 207 aa9.71□□□□□ -0.86
LINC00564-201ENST00000567258 GPR22Q99680 433 aa9.71□□□□□ -0.86
LINC00564-201ENST00000567258 PHACTR1Q9C0D0 580 aa9.71□□□□□ -0.86
LINC00564-201ENST00000567258 ROGDIQ9GZN7 287 aa9.71□□□□□ -0.86
LINC00564-201ENST00000567258 REXO4Q9GZR2 422 aaKnown RBP9.71□□□□□ -0.86
LINC00564-201ENST00000567258 EHD1Q9H4M9 534 aa9.71□□□□□ -0.86
LINC00564-201ENST00000567258 KLHL31Q9H511 634 aa9.71□□□□□ -0.86
LINC00564-201ENST00000567258 NT5DC2Q9H857 520 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms