RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 CELSR3Q9NYQ7 3312 aa11.5□□□□□ -0.57
SF3B3-208ENST00000567250 A0A0G2JN53 185 aa11.5□□□□□ -0.57
SF3B3-208ENST00000567250 ARHGAP10A1A4S6 786 aa11.5□□□□□ -0.57
SF3B3-208ENST00000567250 SERTM1A2A2V5 107 aa11.5□□□□□ -0.57
SF3B3-208ENST00000567250 WDR91A4D1P6 747 aa11.5□□□□□ -0.57
SF3B3-208ENST00000567250 BLACEA4D250 179 aa11.5□□□□□ -0.57
SF3B3-208ENST00000567250 CDC14CA4D256 554 aa11.5□□□□□ -0.57
SF3B3-208ENST00000567250 C4orf51C9J302 202 aa11.5□□□□□ -0.57
SF3B3-208ENST00000567250 SAP18O00422 153 aaKnown RBP11.5□□□□□ -0.57
SF3B3-208ENST00000567250 PLPP1O14494 284 aa11.5□□□□□ -0.57
SF3B3-208ENST00000567250 UBFD1O14562 309 aaKnown RBP11.5□□□□□ -0.57
SF3B3-208ENST00000567250 AZIN1O14977 448 aa11.5□□□□□ -0.57
SF3B3-208ENST00000567250 ATP8B1O43520 1251 aa11.5□□□□□ -0.57
SF3B3-208ENST00000567250 CNOT3O75175 753 aaKnown RBP11.5□□□□□ -0.57
SF3B3-208ENST00000567250 SH3BGRLO75368 114 aa11.5□□□□□ -0.57
SF3B3-208ENST00000567250 SASH3O75995 380 aa11.5□□□□□ -0.57
SF3B3-208ENST00000567250 BMP10O95393 424 aa11.5□□□□□ -0.57
SF3B3-208ENST00000567250 HEXBP07686 556 aa11.5□□□□□ -0.57
SF3B3-208ENST00000567250 FHP07954 510 aa11.5□□□□□ -0.57
SF3B3-208ENST00000567250 PRKAR1AP10644 381 aa11.5□□□□□ -0.57
SF3B3-208ENST00000567250 HIST1H1TP22492 207 aaPredicted RBP11.5□□□□□ -0.57
SF3B3-208ENST00000567250 RAB38P57729 211 aa11.5□□□□□ -0.57
SF3B3-208ENST00000567250 OLR1P78380 273 aa11.5□□□□□ -0.57
SF3B3-208ENST00000567250 IL10RAQ13651 578 aa11.5□□□□□ -0.57
SF3B3-208ENST00000567250 ERV3-1Q14264 604 aa11.5□□□□□ -0.57
SF3B3-208ENST00000567250 IMPG1Q17R60 797 aa11.5□□□□□ -0.57
SF3B3-208ENST00000567250 SYT16Q17RD7 645 aa11.5□□□□□ -0.57
SF3B3-208ENST00000567250 MINDY4Q4G0A6 757 aa11.5□□□□□ -0.57
SF3B3-208ENST00000567250 SPIN4Q56A73 249 aa11.5□□□□□ -0.57
SF3B3-208ENST00000567250 SGO1Q5FBB7 561 aa11.5□□□□□ -0.57
SF3B3-208ENST00000567250 VWA2Q5GFL6 755 aa11.5□□□□□ -0.57
SF3B3-208ENST00000567250 ARL13AQ5H913 290 aaPredicted RBP11.5□□□□□ -0.57
SF3B3-208ENST00000567250 SH2D4BQ5SQS7 431 aa11.5□□□□□ -0.57
SF3B3-208ENST00000567250 ATG16L1Q676U5 607 aa11.5□□□□□ -0.57
SF3B3-208ENST00000567250 OR4C11Q6IEV9 310 aa11.5□□□□□ -0.57
SF3B3-208ENST00000567250 GPR155Q7Z3F1 870 aa11.5□□□□□ -0.57
SF3B3-208ENST00000567250 ZC3H7AQ8IWR0 971 aaKnown RBP11.5□□□□□ -0.57
SF3B3-208ENST00000567250 ZCCHC7Q8N3Z6 543 aaKnown RBP11.5□□□□□ -0.57
SF3B3-208ENST00000567250 RNF175Q8N4F7 328 aa11.5□□□□□ -0.57
SF3B3-208ENST00000567250 C7orf57Q8NEG2 295 aa11.5□□□□□ -0.57
SF3B3-208ENST00000567250 METTL21AQ8WXB1 218 aa11.5□□□□□ -0.57
SF3B3-208ENST00000567250 TBC1D20Q96BZ9 403 aa11.5□□□□□ -0.57
SF3B3-208ENST00000567250 PEX11GQ96HA9 241 aa11.5□□□□□ -0.57
SF3B3-208ENST00000567250 KCNA7Q96RP8 456 aa11.5□□□□□ -0.57
SF3B3-208ENST00000567250 LYRM4Q9HD34 91 aa11.5□□□□□ -0.57
SF3B3-208ENST00000567250 MLXIPLQ9NP71 852 aa11.5□□□□□ -0.57
SF3B3-208ENST00000567250 PFDN4Q9NQP4 134 aa11.5□□□□□ -0.57
SF3B3-208ENST00000567250 LYARQ9NX58 379 aaKnown RBP11.5□□□□□ -0.57
SF3B3-208ENST00000567250 C19orf25Q9UFG5 118 aaPredicted RBP11.5□□□□□ -0.57
SF3B3-208ENST00000567250 PHF11Q9UIL8 331 aa11.5□□□□□ -0.57
SF3B3-208ENST00000567250 C3orf18Q9UK00 162 aa11.5□□□□□ -0.57
SF3B3-208ENST00000567250 MKL2Q9ULH7 1088 aa11.5□□□□□ -0.57
SF3B3-208ENST00000567250 DAPP1Q9UN19 280 aa11.5□□□□□ -0.57
SF3B3-208ENST00000567250 PTPRQQ9UMZ3 2332 aa11.5□□□□□ -0.57
SF3B3-208ENST00000567250 ZFHX4Q86UP3 3567 aa11.49□□□□□ -0.57
SF3B3-208ENST00000567250 IDSB3KWA1 339 aa11.49□□□□□ -0.57
SF3B3-208ENST00000567250 PEX12O00623 359 aa11.49□□□□□ -0.57
SF3B3-208ENST00000567250 CHST10O43529 356 aa11.49□□□□□ -0.57
SF3B3-208ENST00000567250 WT1P19544 449 aaPredicted RBP11.49□□□□□ -0.57
SF3B3-208ENST00000567250 MMP11P24347 488 aa11.49□□□□□ -0.57
SF3B3-208ENST00000567250 ATP5A1P25705 553 aaKnown RBP11.49□□□□□ -0.57
SF3B3-208ENST00000567250 OTX2P32243 289 aa11.49□□□□□ -0.57
SF3B3-208ENST00000567250 BUD31P41223 144 aaPredicted RBP11.49□□□□□ -0.57
SF3B3-208ENST00000567250 CCR10P46092 362 aa11.49□□□□□ -0.57
SF3B3-208ENST00000567250 RRADP55042 308 aa11.49□□□□□ -0.57
SF3B3-208ENST00000567250 PPP2R2AP63151 447 aa11.49□□□□□ -0.57
SF3B3-208ENST00000567250 MPP2Q14168 576 aa11.49□□□□□ -0.57
SF3B3-208ENST00000567250 TUBB8Q3ZCM7 444 aa11.49□□□□□ -0.57
SF3B3-208ENST00000567250 TCHHL1Q5QJ38 904 aaPredicted RBP11.49□□□□□ -0.57
SF3B3-208ENST00000567250 KANK2Q63ZY3 851 aa11.49□□□□□ -0.57
SF3B3-208ENST00000567250 CYP20A1Q6UW02 462 aa11.49□□□□□ -0.57
SF3B3-208ENST00000567250 ZNF793Q6ZN11 406 aa11.49□□□□□ -0.57
SF3B3-208ENST00000567250 RNF165Q6ZSG1 346 aa11.49□□□□□ -0.57
SF3B3-208ENST00000567250 MRGPREQ86SM8 312 aa11.49□□□□□ -0.57
SF3B3-208ENST00000567250 PRSS58Q8IYP2 241 aa11.49□□□□□ -0.57
SF3B3-208ENST00000567250 CLYBLQ8N0X4 340 aa11.49□□□□□ -0.57
SF3B3-208ENST00000567250 CA13Q8N1Q1 262 aa11.49□□□□□ -0.57
SF3B3-208ENST00000567250 ACOT4Q8N9L9 421 aa11.49□□□□□ -0.57
SF3B3-208ENST00000567250 OR5T3Q8NGG3 340 aa11.49□□□□□ -0.57
SF3B3-208ENST00000567250 OR6Y1Q8NGX8 325 aa11.49□□□□□ -0.57
SF3B3-208ENST00000567250 DYDC1Q8WWB3 177 aa11.49□□□□□ -0.57
SF3B3-208ENST00000567250 HBEGFQ99075 208 aa11.49□□□□□ -0.57
SF3B3-208ENST00000567250 SHCBP1LQ9BZQ2 653 aa11.49□□□□□ -0.57
SF3B3-208ENST00000567250 MED4Q9NPJ6 270 aa11.49□□□□□ -0.57
SF3B3-208ENST00000567250 PRDM7Q9NQW5 492 aa11.49□□□□□ -0.57
SF3B3-208ENST00000567250 FARSBQ9NSD9 589 aaKnown RBP11.49□□□□□ -0.57
SF3B3-208ENST00000567250 VPS29Q9UBQ0 182 aa11.49□□□□□ -0.57
SF3B3-208ENST00000567250 ADAM29Q9UKF5 820 aa11.49□□□□□ -0.57
SF3B3-208ENST00000567250 MAN2B2Q9Y2E5 1009 aa11.49□□□□□ -0.57
SF3B3-208ENST00000567250 FIS1Q9Y3D6 152 aa11.49□□□□□ -0.57
SF3B3-208ENST00000567250 MMACHCQ9Y4U1 282 aa11.49□□□□□ -0.57
SF3B3-208ENST00000567250 TIMM22Q9Y584 194 aa11.49□□□□□ -0.57
SF3B3-208ENST00000567250 EPG5Q9HCE0 2579 aa11.49□□□□□ -0.57
SF3B3-208ENST00000567250 RTCAO00442 366 aaKnown RBP11.48□□□□□ -0.57
SF3B3-208ENST00000567250 CLDN4O14493 209 aa11.48□□□□□ -0.57
SF3B3-208ENST00000567250 NKX2-8O15522 239 aa11.48□□□□□ -0.57
SF3B3-208ENST00000567250 RGS14O43566 566 aa11.48□□□□□ -0.57
SF3B3-208ENST00000567250 GUCY1B2O75343 617 aa11.48□□□□□ -0.57
SF3B3-208ENST00000567250 RSL1D1O76021 490 aaKnown RBP11.48□□□□□ -0.57
SF3B3-208ENST00000567250 ETHE1O95571 254 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms