RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 NDOR1Q9UHB4 597 aa15.03■□□□□ -0
COMMD4-215ENST00000566843 AFF4Q9UHB7 1163 aaKnown RBP15.03■□□□□ -0
COMMD4-215ENST00000566843 GPSM3Q9Y4H4 160 aa15.03■□□□□ -0
COMMD4-215ENST00000566843 LINC00854A0A1B0GVQ3 168 aa15.02□□□□□ -0.01
COMMD4-215ENST00000566843 J3KTA2 159 aa15.02□□□□□ -0.01
COMMD4-215ENST00000566843 PLA2G10O15496 165 aa15.02□□□□□ -0.01
COMMD4-215ENST00000566843 TPST2O60704 377 aa15.02□□□□□ -0.01
COMMD4-215ENST00000566843 ICMTO60725 284 aa15.02□□□□□ -0.01
COMMD4-215ENST00000566843 ENTPD6O75354 484 aa15.02□□□□□ -0.01
COMMD4-215ENST00000566843 CLDN7O95471 211 aa15.02□□□□□ -0.01
COMMD4-215ENST00000566843 MPC1LP0DKB6 136 aa15.02□□□□□ -0.01
COMMD4-215ENST00000566843 PRKAR2AP13861 404 aaKnown RBP15.02□□□□□ -0.01
COMMD4-215ENST00000566843 CD22P20273 847 aa15.02□□□□□ -0.01
COMMD4-215ENST00000566843 CPN2P22792 545 aa15.02□□□□□ -0.01
COMMD4-215ENST00000566843 PKLRP30613 574 aa15.02□□□□□ -0.01
COMMD4-215ENST00000566843 KIR2DL3P43628 341 aa15.02□□□□□ -0.01
COMMD4-215ENST00000566843 OR1G1P47890 313 aa15.02□□□□□ -0.01
COMMD4-215ENST00000566843 GZMKP49863 264 aa15.02□□□□□ -0.01
COMMD4-215ENST00000566843 NKX3-2P78367 333 aa15.02□□□□□ -0.01
COMMD4-215ENST00000566843 RAE1P78406 368 aaKnown RBP15.02□□□□□ -0.01
COMMD4-215ENST00000566843 CD83Q01151 205 aa15.02□□□□□ -0.01
COMMD4-215ENST00000566843 EEF1A2Q05639 463 aaKnown RBP15.02□□□□□ -0.01
COMMD4-215ENST00000566843 LRRC74AQ0VAA2 488 aa15.02□□□□□ -0.01
COMMD4-215ENST00000566843 ZNF770Q6IQ21 691 aaPredicted RBP15.02□□□□□ -0.01
COMMD4-215ENST00000566843 DDX53Q86TM3 631 aaKnown RBP15.02□□□□□ -0.01
COMMD4-215ENST00000566843 CLDN22Q8N7P3 220 aa15.02□□□□□ -0.01
COMMD4-215ENST00000566843 GOT1L1Q8NHS2 421 aaPredicted RBP15.02□□□□□ -0.01
COMMD4-215ENST00000566843 CREB3L4Q8TEY5 395 aa15.02□□□□□ -0.01
COMMD4-215ENST00000566843 KLHL6Q8WZ60 621 aa15.02□□□□□ -0.01
COMMD4-215ENST00000566843 PLD4Q96BZ4 506 aa15.02□□□□□ -0.01
COMMD4-215ENST00000566843 TMEM80Q96HE8 168 aa15.02□□□□□ -0.01
COMMD4-215ENST00000566843 ZDHHC3Q9NYG2 299 aa15.02□□□□□ -0.01
COMMD4-215ENST00000566843 CLEC2DQ9UHP7 191 aa15.02□□□□□ -0.01
COMMD4-215ENST00000566843 SSR3Q9UNL2 185 aa15.02□□□□□ -0.01
COMMD4-215ENST00000566843 FCF1Q9Y324 198 aaKnown RBP15.02□□□□□ -0.01
COMMD4-215ENST00000566843 SLC38A8A6NNN8 435 aa15.01□□□□□ -0.01
COMMD4-215ENST00000566843 RNASET2O00584 256 aaKnown RBP15.01□□□□□ -0.01
COMMD4-215ENST00000566843 SLC16A5O15375 505 aa15.01□□□□□ -0.01
COMMD4-215ENST00000566843 GJB5O95377 273 aa15.01□□□□□ -0.01
COMMD4-215ENST00000566843 HIST1H2AGP0C0S8 130 aaPredicted RBP15.01□□□□□ -0.01
COMMD4-215ENST00000566843 CKMT1AP12532 417 aa15.01□□□□□ -0.01
COMMD4-215ENST00000566843 POU2F1P14859 743 aa15.01□□□□□ -0.01
COMMD4-215ENST00000566843 HIST1H2ADP20671 130 aa15.01□□□□□ -0.01
COMMD4-215ENST00000566843 PTPN5P54829 565 aa15.01□□□□□ -0.01
COMMD4-215ENST00000566843 ACSM2AQ08AH3 577 aa15.01□□□□□ -0.01
COMMD4-215ENST00000566843 MLLT11Q13015 90 aaPredicted RBP15.01□□□□□ -0.01
COMMD4-215ENST00000566843 MBTPS1Q14703 1052 aa15.01□□□□□ -0.01
COMMD4-215ENST00000566843 COX20Q5RI15 118 aa15.01□□□□□ -0.01
COMMD4-215ENST00000566843 GCNT6Q5T4J0 391 aa15.01□□□□□ -0.01
COMMD4-215ENST00000566843 ZNF648Q5T619 568 aaPredicted RBP15.01□□□□□ -0.01
COMMD4-215ENST00000566843 SAXO2Q658L1 398 aa15.01□□□□□ -0.01
COMMD4-215ENST00000566843 ACSM2BQ68CK6 577 aa15.01□□□□□ -0.01
COMMD4-215ENST00000566843 GLB1LQ6UWU2 654 aa15.01□□□□□ -0.01
COMMD4-215ENST00000566843 HSDL2Q6YN16 418 aa15.01□□□□□ -0.01
COMMD4-215ENST00000566843 NANOGP1Q8N7R0 232 aa15.01□□□□□ -0.01
COMMD4-215ENST00000566843 AQP11Q8NBQ7 271 aa15.01□□□□□ -0.01
COMMD4-215ENST00000566843 CDC26Q8NHZ8 85 aa15.01□□□□□ -0.01
COMMD4-215ENST00000566843 HIST1H2AHQ96KK5 128 aa15.01□□□□□ -0.01
COMMD4-215ENST00000566843 HIST1H2AJQ99878 128 aa15.01□□□□□ -0.01
COMMD4-215ENST00000566843 TCF25Q9BQ70 676 aa15.01□□□□□ -0.01
COMMD4-215ENST00000566843 H2AFJQ9BTM1 129 aa15.01□□□□□ -0.01
COMMD4-215ENST00000566843 MND1Q9BWT6 205 aa15.01□□□□□ -0.01
COMMD4-215ENST00000566843 TMEM38AQ9H6F2 299 aa15.01□□□□□ -0.01
COMMD4-215ENST00000566843 PRG3Q9Y2Y8 225 aaPredicted RBP15.01□□□□□ -0.01
COMMD4-215ENST00000566843 ENPP4Q9Y6X5 453 aa15.01□□□□□ -0.01
COMMD4-215ENST00000566843 LOC105371267A0A1B0GV96 52 aa15.01□□□□□ -0.01
COMMD4-215ENST00000566843 OR6C70A6NIJ9 312 aa15.01□□□□□ -0.01
COMMD4-215ENST00000566843 GADD45GO95257 159 aa15.01□□□□□ -0.01
COMMD4-215ENST00000566843 GASTP01350 101 aa15.01□□□□□ -0.01
COMMD4-215ENST00000566843 ETFAP13804 333 aa15.01□□□□□ -0.01
COMMD4-215ENST00000566843 HSD3B1P14060 373 aa15.01□□□□□ -0.01
COMMD4-215ENST00000566843 HSD3B2P26439 372 aa15.01□□□□□ -0.01
COMMD4-215ENST00000566843 CORO1AP31146 461 aaKnown RBP15.01□□□□□ -0.01
COMMD4-215ENST00000566843 HNF1BP35680 557 aa15.01□□□□□ -0.01
COMMD4-215ENST00000566843 TGM4P49221 684 aa15.01□□□□□ -0.01
COMMD4-215ENST00000566843 ARPP19P56211 112 aa15.01□□□□□ -0.01
COMMD4-215ENST00000566843 PFN3P60673 137 aa15.01□□□□□ -0.01
COMMD4-215ENST00000566843 FCHO2Q0JRZ9 810 aa15.01□□□□□ -0.01
COMMD4-215ENST00000566843 GPR17Q13304 367 aa15.01□□□□□ -0.01
COMMD4-215ENST00000566843 SP140Q13342 867 aa15.01□□□□□ -0.01
COMMD4-215ENST00000566843 SCARB2Q14108 478 aa15.01□□□□□ -0.01
COMMD4-215ENST00000566843 QPRTQ15274 297 aa15.01□□□□□ -0.01
COMMD4-215ENST00000566843 CRB2Q5IJ48 1285 aa15.01□□□□□ -0.01
COMMD4-215ENST00000566843 CXCL17Q6UXB2 119 aa15.01□□□□□ -0.01
COMMD4-215ENST00000566843 PROKR2Q8NFJ6 384 aa15.01□□□□□ -0.01
COMMD4-215ENST00000566843 OR4A15Q8NGL6 344 aa15.01□□□□□ -0.01
COMMD4-215ENST00000566843 RAET1EQ8TD07 263 aa15.01□□□□□ -0.01
COMMD4-215ENST00000566843 FAM193BQ96PV7 902 aaPredicted RBP15.01□□□□□ -0.01
COMMD4-215ENST00000566843 VPS35Q96QK1 796 aa15.01□□□□□ -0.01
COMMD4-215ENST00000566843 FAM83DQ9H4H8 585 aa15.01□□□□□ -0.01
COMMD4-215ENST00000566843 NMNAT1Q9HAN9 279 aaPredicted RBP15.01□□□□□ -0.01
COMMD4-215ENST00000566843 PLEKHB1Q9UF11 243 aaPredicted RBP15.01□□□□□ -0.01
COMMD4-215ENST00000566843 DNAH12Q6ZR08 3092 aa15.01□□□□□ -0.01
COMMD4-215ENST00000566843 PLXNB3Q9ULL4 1909 aa15□□□□□ -0.01
COMMD4-215ENST00000566843 A0A1W2PQ67 120 aa15□□□□□ -0.01
COMMD4-215ENST00000566843 FABP12A6NFH5 140 aa15□□□□□ -0.01
COMMD4-215ENST00000566843 GFYI3L273 518 aa15□□□□□ -0.01
COMMD4-215ENST00000566843 POLR1CO15160 346 aaPredicted RBP15□□□□□ -0.01
COMMD4-215ENST00000566843 DUSP11O75319 330 aaKnown RBP15□□□□□ -0.01
COMMD4-215ENST00000566843 STC2O76061 302 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms