RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 SSR2P43308 183 aa24.66■■□□□ 1.54
NME3-209ENST00000566600 ATP1A4Q13733 1029 aa24.66■■□□□ 1.54
NME3-209ENST00000566600 TUBB8Q3ZCM7 444 aa24.66■■□□□ 1.54
NME3-209ENST00000566600 SGO1Q5FBB7 561 aa24.66■■□□□ 1.54
NME3-209ENST00000566600 OR4C11Q6IEV9 310 aa24.66■■□□□ 1.54
NME3-209ENST00000566600 APLFQ8IW19 511 aaPredicted RBP24.66■■□□□ 1.54
NME3-209ENST00000566600 HOMEZQ8IX15 550 aa24.66■■□□□ 1.54
NME3-209ENST00000566600 WBP1Q96G27 269 aa24.66■■□□□ 1.54
NME3-209ENST00000566600 GATA5Q9BWX5 397 aaPredicted RBP24.66■■□□□ 1.54
NME3-209ENST00000566600 P4HTMQ9NXG6 502 aa24.66■■□□□ 1.54
NME3-209ENST00000566600 AHSPQ9NZD4 102 aa24.66■■□□□ 1.54
NME3-209ENST00000566600 HS3ST3B1Q9Y662 390 aa24.66■■□□□ 1.54
NME3-209ENST00000566600 SAP18O00422 153 aaKnown RBP24.65■■□□□ 1.54
NME3-209ENST00000566600 MANBAO00462 879 aa24.65■■□□□ 1.54
NME3-209ENST00000566600 ULK1O75385 1050 aa24.65■■□□□ 1.54
NME3-209ENST00000566600 JRKO75564 520 aa24.65■■□□□ 1.54
NME3-209ENST00000566600 BPGMP07738 259 aa24.65■■□□□ 1.54
NME3-209ENST00000566600 HSD3B1P14060 373 aa24.65■■□□□ 1.54
NME3-209ENST00000566600 HIST1H1TP22492 207 aaPredicted RBP24.65■■□□□ 1.54
NME3-209ENST00000566600 ATP5A1P25705 553 aaKnown RBP24.65■■□□□ 1.54
NME3-209ENST00000566600 HSD3B2P26439 372 aa24.65■■□□□ 1.54
NME3-209ENST00000566600 CERS1P27544 350 aa24.65■■□□□ 1.54
NME3-209ENST00000566600 TMEM151BQ8IW70 566 aa24.65■■□□□ 1.54
NME3-209ENST00000566600 ACOT4Q8N9L9 421 aa24.65■■□□□ 1.54
NME3-209ENST00000566600 VN1R1Q9GZP7 353 aa24.65■■□□□ 1.54
NME3-209ENST00000566600 VIPAS39Q9H9C1 493 aa24.65■■□□□ 1.54
NME3-209ENST00000566600 LYRM4Q9HD34 91 aa24.65■■□□□ 1.54
NME3-209ENST00000566600 MRPS33Q9Y291 106 aaKnown RBP24.65■■□□□ 1.54
NME3-209ENST00000566600 SPACA6W5XKT8 324 aa24.65■■□□□ 1.54
NME3-209ENST00000566600 ARGFXA6NJG6 315 aa24.64■■□□□ 1.54
NME3-209ENST00000566600 SOCS6O14544 535 aa24.64■■□□□ 1.54
NME3-209ENST00000566600 UBFD1O14562 309 aaKnown RBP24.64■■□□□ 1.54
NME3-209ENST00000566600 NPHS1O60500 1241 aa24.64■■□□□ 1.54
NME3-209ENST00000566600 DNAJB6O75190 326 aa24.64■■□□□ 1.54
NME3-209ENST00000566600 ALOX12BO75342 701 aa24.64■■□□□ 1.54
NME3-209ENST00000566600 CRCPO75575 148 aa24.64■■□□□ 1.54
NME3-209ENST00000566600 PDYNP01213 254 aa24.64■■□□□ 1.54
NME3-209ENST00000566600 ACPPP15309 386 aa24.64■■□□□ 1.54
NME3-209ENST00000566600 SERPINB5P36952 375 aa24.64■■□□□ 1.54
NME3-209ENST00000566600 RAB38P57729 211 aa24.64■■□□□ 1.54
NME3-209ENST00000566600 RUNX2Q13950 521 aa24.64■■□□□ 1.54
NME3-209ENST00000566600 MECRQ9BV79 373 aa24.64■■□□□ 1.54
NME3-209ENST00000566600 LANCL2Q9NS86 450 aa24.64■■□□□ 1.54
NME3-209ENST00000566600 C19orf25Q9UFG5 118 aaPredicted RBP24.64■■□□□ 1.54
NME3-209ENST00000566600 DAPP1Q9UN19 280 aa24.64■■□□□ 1.54
NME3-209ENST00000566600 RTCAO00442 366 aaKnown RBP24.63■■□□□ 1.53
NME3-209ENST00000566600 PLPP1O14494 284 aa24.63■■□□□ 1.53
NME3-209ENST00000566600 BIRC5O15392 142 aa24.63■■□□□ 1.53
NME3-209ENST00000566600 C8orf89P0DMQ9 161 aa24.63■■□□□ 1.53
NME3-209ENST00000566600 SERPINB4P48594 390 aa24.63■■□□□ 1.53
NME3-209ENST00000566600 CSTF3Q12996 717 aaKnown RBP24.63■■□□□ 1.53
NME3-209ENST00000566600 AGBL2Q5U5Z8 902 aa24.63■■□□□ 1.53
NME3-209ENST00000566600 TMEM205Q6UW68 189 aa24.63■■□□□ 1.53
NME3-209ENST00000566600 KIRREL2Q6UWL6 708 aa24.63■■□□□ 1.53
NME3-209ENST00000566600 NUDCD3Q8IVD9 361 aa24.63■■□□□ 1.53
NME3-209ENST00000566600 ZCCHC7Q8N3Z6 543 aaKnown RBP24.63■■□□□ 1.53
NME3-209ENST00000566600 GBP7Q8N8V2 638 aaPredicted RBP24.63■■□□□ 1.53
NME3-209ENST00000566600 PLPP5Q8NEB5 264 aa24.63■■□□□ 1.53
NME3-209ENST00000566600 TLCD1Q96CP7 247 aa24.63■■□□□ 1.53
NME3-209ENST00000566600 RBCK1Q9BYM8 510 aa24.63■■□□□ 1.53
NME3-209ENST00000566600 ING2Q9H160 280 aa24.63■■□□□ 1.53
NME3-209ENST00000566600 EML4Q9HC35 981 aaKnown RBP24.63■■□□□ 1.53
NME3-209ENST00000566600 FARSBQ9NSD9 589 aaKnown RBP24.63■■□□□ 1.53
NME3-209ENST00000566600 NUP210LQ5VU65 1888 aa24.62■■□□□ 1.53
NME3-209ENST00000566600 LOC400499M0QZD8 3231 aa24.62■■□□□ 1.53
NME3-209ENST00000566600 B4GALT2O60909 372 aa24.62■■□□□ 1.53
NME3-209ENST00000566600 ETHE1O95571 254 aa24.62■■□□□ 1.53
NME3-209ENST00000566600 LIM2P55344 173 aa24.62■■□□□ 1.53
NME3-209ENST00000566600 MAGOHP61326 146 aaKnown RBP24.62■■□□□ 1.53
NME3-209ENST00000566600 GALNT1Q10472 559 aaPredicted RBP24.62■■□□□ 1.53
NME3-209ENST00000566600 LINC00303Q3SY05 128 aa24.62■■□□□ 1.53
NME3-209ENST00000566600 DCAF10Q5QP82 559 aa24.62■■□□□ 1.53
NME3-209ENST00000566600 ZNF793Q6ZN11 406 aa24.62■■□□□ 1.53
NME3-209ENST00000566600 NUDT13Q86X67 352 aa24.62■■□□□ 1.53
NME3-209ENST00000566600 CLEC1AQ8NC01 280 aa24.62■■□□□ 1.53
NME3-209ENST00000566600 LSM14AQ8ND56 463 aaKnown RBP24.62■■□□□ 1.53
NME3-209ENST00000566600 OR11G2Q8NGC1 345 aa24.62■■□□□ 1.53
NME3-209ENST00000566600 ADNPQ9H2P0 1102 aa24.62■■□□□ 1.53
NME3-209ENST00000566600 MS4A12Q9NXJ0 267 aa24.62■■□□□ 1.53
NME3-209ENST00000566600 SLC12A4Q9UP95 1085 aa24.62■■□□□ 1.53
NME3-209ENST00000566600 LOC102723996A0A087X1L8 192 aa24.61■■□□□ 1.53
NME3-209ENST00000566600 A0A1W2PQ72 361 aa24.61■■□□□ 1.53
NME3-209ENST00000566600 CLDN4O14493 209 aa24.61■■□□□ 1.53
NME3-209ENST00000566600 PRMT3O60678 531 aa24.61■■□□□ 1.53
NME3-209ENST00000566600 CDC123O75794 336 aaPredicted RBP24.61■■□□□ 1.53
NME3-209ENST00000566600 SLC18A1P54219 525 aa24.61■■□□□ 1.53
NME3-209ENST00000566600 POLE2P56282 527 aa24.61■■□□□ 1.53
NME3-209ENST00000566600 RHAGQ02094 409 aa24.61■■□□□ 1.53
NME3-209ENST00000566600 FAAH2Q6GMR7 532 aa24.61■■□□□ 1.53
NME3-209ENST00000566600 QSOX2Q6ZRP7 698 aa24.61■■□□□ 1.53
NME3-209ENST00000566600 PAGE2Q7Z2X7 111 aa24.61■■□□□ 1.53
NME3-209ENST00000566600 ZNF595Q8IYB9 648 aa24.61■■□□□ 1.53
NME3-209ENST00000566600 SHISA5Q8N114 240 aa24.61■■□□□ 1.53
NME3-209ENST00000566600 GOLGA6L1Q8N7Z2 621 aa24.61■■□□□ 1.53
NME3-209ENST00000566600 PPP1R14CQ8TAE6 165 aa24.61■■□□□ 1.53
NME3-209ENST00000566600 KCNA7Q96RP8 456 aa24.61■■□□□ 1.53
NME3-209ENST00000566600 DDX31Q9H8H2 851 aaKnown RBP24.61■■□□□ 1.53
NME3-209ENST00000566600 TUBD1Q9UJT1 453 aa24.61■■□□□ 1.53
NME3-209ENST00000566600 FBXL4Q9UKA2 621 aa24.61■■□□□ 1.53
NME3-209ENST00000566600 ADAM29Q9UKF5 820 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms