RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 F2RL3Q96RI0 385 aa11.98□□□□□ -0.49
SF3B3-206ENST00000565990 CCT7Q99832 543 aa11.98□□□□□ -0.49
SF3B3-206ENST00000565990 DPH2Q9BQC3 489 aaPredicted RBP11.98□□□□□ -0.49
SF3B3-206ENST00000565990 NDC1Q9BTX1 674 aa11.98□□□□□ -0.49
SF3B3-206ENST00000565990 SHCBP1LQ9BZQ2 653 aa11.98□□□□□ -0.49
SF3B3-206ENST00000565990 FAM192AQ9GZU8 254 aa11.98□□□□□ -0.49
SF3B3-206ENST00000565990 TUBB1Q9H4B7 451 aa11.98□□□□□ -0.49
SF3B3-206ENST00000565990 CLK4Q9HAZ1 481 aaKnown RBP11.98□□□□□ -0.49
SF3B3-206ENST00000565990 CUTCQ9NTM9 273 aa11.98□□□□□ -0.49
SF3B3-206ENST00000565990 FOXJ2Q9P0K8 574 aa11.98□□□□□ -0.49
SF3B3-206ENST00000565990 DKK4Q9UBT3 224 aa11.98□□□□□ -0.49
SF3B3-206ENST00000565990 SCOCQ9UIL1 159 aa11.98□□□□□ -0.49
SF3B3-206ENST00000565990 MRPS2Q9Y399 296 aaKnown RBP11.98□□□□□ -0.49
SF3B3-206ENST00000565990 MEN1O00255 615 aa11.97□□□□□ -0.49
SF3B3-206ENST00000565990 PEX1O43933 1283 aa11.97□□□□□ -0.49
SF3B3-206ENST00000565990 BRINP1O60477 761 aa11.97□□□□□ -0.49
SF3B3-206ENST00000565990 GALR3O60755 368 aaPredicted RBP11.97□□□□□ -0.49
SF3B3-206ENST00000565990 CPNE3O75131 537 aaKnown RBP11.97□□□□□ -0.49
SF3B3-206ENST00000565990 KRT36O76013 467 aa11.97□□□□□ -0.49
SF3B3-206ENST00000565990 STK17BO94768 372 aa11.97□□□□□ -0.49
SF3B3-206ENST00000565990 ETHE1O95571 254 aa11.97□□□□□ -0.49
SF3B3-206ENST00000565990 PIM1P11309 404 aaPredicted RBP11.97□□□□□ -0.49
SF3B3-206ENST00000565990 ANPEPP15144 967 aa11.97□□□□□ -0.49
SF3B3-206ENST00000565990 ALOX12P18054 663 aa11.97□□□□□ -0.49
SF3B3-206ENST00000565990 ITGAXP20702 1163 aa11.97□□□□□ -0.49
SF3B3-206ENST00000565990 PRPH2P23942 346 aa11.97□□□□□ -0.49
SF3B3-206ENST00000565990 CALRP27797 417 aaKnown RBP11.97□□□□□ -0.49
SF3B3-206ENST00000565990 HMOX2P30519 316 aa11.97□□□□□ -0.49
SF3B3-206ENST00000565990 TSFMP43897 325 aaKnown RBP11.97□□□□□ -0.49
SF3B3-206ENST00000565990 RPS13P62277 151 aaKnown RBP11.97□□□□□ -0.49
SF3B3-206ENST00000565990 CYP4F2P78329 520 aa11.97□□□□□ -0.49
SF3B3-206ENST00000565990 PHEXP78562 749 aa11.97□□□□□ -0.49
SF3B3-206ENST00000565990 CSTF3Q12996 717 aaKnown RBP11.97□□□□□ -0.49
SF3B3-206ENST00000565990 NDUFA9Q16795 377 aa11.97□□□□□ -0.49
SF3B3-206ENST00000565990 TOR1AIP1Q5JTV8 583 aa11.97□□□□□ -0.49
SF3B3-206ENST00000565990 FAM219BQ5XKK7 198 aa11.97□□□□□ -0.49
SF3B3-206ENST00000565990 CLEC6AQ6EIG7 209 aa11.97□□□□□ -0.49
SF3B3-206ENST00000565990 NIPAL1Q6NVV3 410 aa11.97□□□□□ -0.49
SF3B3-206ENST00000565990 ABHD17CQ6PCB6 329 aa11.97□□□□□ -0.49
SF3B3-206ENST00000565990 Q6ZSR9 355 aa11.97□□□□□ -0.49
SF3B3-206ENST00000565990 TTLL10Q6ZVT0 673 aa11.97□□□□□ -0.49
SF3B3-206ENST00000565990 MED25Q71SY5 747 aa11.97□□□□□ -0.49
SF3B3-206ENST00000565990 TIPARPQ7Z3E1 657 aaKnown RBP11.97□□□□□ -0.49
SF3B3-206ENST00000565990 DTX1Q86Y01 620 aa11.97□□□□□ -0.49
SF3B3-206ENST00000565990 DSELQ8IZU8 1212 aa11.97□□□□□ -0.49
SF3B3-206ENST00000565990 ZNF781Q8N8C0 355 aa11.97□□□□□ -0.49
SF3B3-206ENST00000565990 SRFBP1Q8NEF9 429 aaKnown RBP11.97□□□□□ -0.49
SF3B3-206ENST00000565990 OR2L5Q8NG80 312 aa11.97□□□□□ -0.49
SF3B3-206ENST00000565990 GAL3ST3Q96A11 431 aa11.97□□□□□ -0.49
SF3B3-206ENST00000565990 C11orf24Q96F05 449 aaPredicted RBP11.97□□□□□ -0.49
SF3B3-206ENST00000565990 QRFPRQ96P65 431 aa11.97□□□□□ -0.49
SF3B3-206ENST00000565990 SERPINI1Q99574 410 aa11.97□□□□□ -0.49
SF3B3-206ENST00000565990 TMEM121BQ9BXQ6 578 aaPredicted RBP11.97□□□□□ -0.49
SF3B3-206ENST00000565990 ZNF717Q9BY31 904 aaPredicted RBP11.97□□□□□ -0.49
SF3B3-206ENST00000565990 ULBP3Q9BZM4 244 aa11.97□□□□□ -0.49
SF3B3-206ENST00000565990 REXO4Q9GZR2 422 aaKnown RBP11.97□□□□□ -0.49
SF3B3-206ENST00000565990 OR51B5Q9H339 312 aa11.97□□□□□ -0.49
SF3B3-206ENST00000565990 PNPOQ9NVS9 261 aa11.97□□□□□ -0.49
SF3B3-206ENST00000565990 SIRT5Q9NXA8 310 aa11.97□□□□□ -0.49
SF3B3-206ENST00000565990 VPS29Q9UBQ0 182 aa11.97□□□□□ -0.49
SF3B3-206ENST00000565990 AK5Q9Y6K8 562 aa11.97□□□□□ -0.49
SF3B3-206ENST00000565990 MED19A0JLT2 244 aaPredicted RBP11.96□□□□□ -0.49
SF3B3-206ENST00000565990 C4orf51C9J302 202 aa11.96□□□□□ -0.49
SF3B3-206ENST00000565990 H0YIG0 161 aa11.96□□□□□ -0.49
SF3B3-206ENST00000565990 ZNF195O14628 629 aa11.96□□□□□ -0.49
SF3B3-206ENST00000565990 SEMA3DO95025 777 aa11.96□□□□□ -0.49
SF3B3-206ENST00000565990 SCELO95171 688 aa11.96□□□□□ -0.49
SF3B3-206ENST00000565990 NSA2O95478 260 aaKnown RBP11.96□□□□□ -0.49
SF3B3-206ENST00000565990 STATHP02808 62 aa11.96□□□□□ -0.49
SF3B3-206ENST00000565990 SERPIND1P05546 499 aa11.96□□□□□ -0.49
SF3B3-206ENST00000565990 ALAS2P22557 587 aa11.96□□□□□ -0.49
SF3B3-206ENST00000565990 IDH3AP50213 366 aa11.96□□□□□ -0.49
SF3B3-206ENST00000565990 MXRA7P84157 204 aa11.96□□□□□ -0.49
SF3B3-206ENST00000565990 ABHD18Q0P651 414 aa11.96□□□□□ -0.49
SF3B3-206ENST00000565990 TBL3Q12788 808 aaKnown RBP11.96□□□□□ -0.49
SF3B3-206ENST00000565990 KIAA0040Q15053 153 aa11.96□□□□□ -0.49
SF3B3-206ENST00000565990 SGO1Q5FBB7 561 aa11.96□□□□□ -0.49
SF3B3-206ENST00000565990 C1orf146Q5VVC0 180 aa11.96□□□□□ -0.49
SF3B3-206ENST00000565990 EPGNQ6UW88 154 aa11.96□□□□□ -0.49
SF3B3-206ENST00000565990 C6orf15Q6UXA7 325 aaPredicted RBP11.96□□□□□ -0.49
SF3B3-206ENST00000565990 RIPOR1Q6ZS17 1223 aa11.96□□□□□ -0.49
SF3B3-206ENST00000565990 ABHD13Q7L211 337 aa11.96□□□□□ -0.49
SF3B3-206ENST00000565990 PDSS2Q86YH6 399 aa11.96□□□□□ -0.49
SF3B3-206ENST00000565990 METTL4Q8N3J2 472 aa11.96□□□□□ -0.49
SF3B3-206ENST00000565990 CHTF18Q8WVB6 975 aa11.96□□□□□ -0.49
SF3B3-206ENST00000565990 WDR60Q8WVS4 1066 aa11.96□□□□□ -0.49
SF3B3-206ENST00000565990 GATA6Q92908 595 aa11.96□□□□□ -0.49
SF3B3-206ENST00000565990 RGMAQ96B86 450 aa11.96□□□□□ -0.49
SF3B3-206ENST00000565990 CLIP3Q96DZ5 547 aa11.96□□□□□ -0.49
SF3B3-206ENST00000565990 METTL2AQ96IZ6 378 aaKnown RBP11.96□□□□□ -0.49
SF3B3-206ENST00000565990 TBCDQ9BTW9 1192 aa11.96□□□□□ -0.49
SF3B3-206ENST00000565990 ACPTQ9BZG2 426 aa11.96□□□□□ -0.49
SF3B3-206ENST00000565990 FAM117AQ9C073 453 aa11.96□□□□□ -0.49
SF3B3-206ENST00000565990 DDX31Q9H8H2 851 aaKnown RBP11.96□□□□□ -0.49
SF3B3-206ENST00000565990 AKIRIN1Q9H9L7 192 aaPredicted RBP11.96□□□□□ -0.49
SF3B3-206ENST00000565990 LHX9Q9NQ69 397 aa11.96□□□□□ -0.49
SF3B3-206ENST00000565990 THSD1Q9NS62 852 aa11.96□□□□□ -0.49
SF3B3-206ENST00000565990 SLC22A11Q9NSA0 550 aa11.96□□□□□ -0.49
SF3B3-206ENST00000565990 ARMCX1Q9P291 453 aa11.96□□□□□ -0.49
SF3B3-206ENST00000565990 SLC7A8Q9UHI5 535 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms