RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 KCMF1Q9P0J7 381 aa11.79□□□□□ -0.52
KARS-204ENST00000564578 HCN3Q9P1Z3 774 aa11.79□□□□□ -0.52
KARS-204ENST00000564578 TRPC4Q9UBN4 977 aa11.79□□□□□ -0.52
KARS-204ENST00000564578 IL17BQ9UHF5 180 aa11.79□□□□□ -0.52
KARS-204ENST00000564578 RAXQ9Y2V3 346 aa11.79□□□□□ -0.52
KARS-204ENST00000564578 CCDC88CQ9P219 2028 aa11.79□□□□□ -0.52
KARS-204ENST00000564578 A0A0A6YYD5 115 aa11.78□□□□□ -0.52
KARS-204ENST00000564578 VSTM2BA6NLU5 285 aa11.78□□□□□ -0.52
KARS-204ENST00000564578 C21orf140B9A014 251 aa11.78□□□□□ -0.52
KARS-204ENST00000564578 NPIPB8E9PQR5 432 aa11.78□□□□□ -0.52
KARS-204ENST00000564578 CHST10O43529 356 aa11.78□□□□□ -0.52
KARS-204ENST00000564578 TMPRSS11DO60235 418 aa11.78□□□□□ -0.52
KARS-204ENST00000564578 JRKO75564 520 aa11.78□□□□□ -0.52
KARS-204ENST00000564578 LIFP15018 202 aa11.78□□□□□ -0.52
KARS-204ENST00000564578 FBLP22087 321 aaKnown RBP11.78□□□□□ -0.52
KARS-204ENST00000564578 TPP2P29144 1249 aaPredicted RBP11.78□□□□□ -0.52
KARS-204ENST00000564578 DLSTP36957 453 aa11.78□□□□□ -0.52
KARS-204ENST00000564578 MTTPP55157 894 aa11.78□□□□□ -0.52
KARS-204ENST00000564578 GUCY1A3Q02108 690 aa11.78□□□□□ -0.52
KARS-204ENST00000564578 AP5B1Q2VPB7 878 aa11.78□□□□□ -0.52
KARS-204ENST00000564578 XKR7Q5GH72 579 aa11.78□□□□□ -0.52
KARS-204ENST00000564578 NIPAL1Q6NVV3 410 aa11.78□□□□□ -0.52
KARS-204ENST00000564578 COMMD6Q7Z4G1 85 aa11.78□□□□□ -0.52
KARS-204ENST00000564578 C1orf52Q8N6N3 182 aaKnown RBP11.78□□□□□ -0.52
KARS-204ENST00000564578 RNF217Q8TC41 542 aa11.78□□□□□ -0.52
KARS-204ENST00000564578 STT3BQ8TCJ2 826 aa11.78□□□□□ -0.52
KARS-204ENST00000564578 KCNE4Q8WWG9 221 aa11.78□□□□□ -0.52
KARS-204ENST00000564578 FKBP10Q96AY3 582 aa11.78□□□□□ -0.52
KARS-204ENST00000564578 C7orf26Q96N11 449 aa11.78□□□□□ -0.52
KARS-204ENST00000564578 SERINC2Q96SA4 455 aa11.78□□□□□ -0.52
KARS-204ENST00000564578 SPSB2Q99619 263 aa11.78□□□□□ -0.52
KARS-204ENST00000564578 PRM3Q9NNZ6 103 aa11.78□□□□□ -0.52
KARS-204ENST00000564578 ZNF282Q9UDV7 671 aaPredicted RBP11.78□□□□□ -0.52
KARS-204ENST00000564578 PCDHGA6Q9Y5G7 932 aa11.78□□□□□ -0.52
KARS-204ENST00000564578 MRPS18BQ9Y676 258 aaKnown RBP11.78□□□□□ -0.52
KARS-204ENST00000564578 ATP6AP2A0A1C7CYW4 349 aa11.78□□□□□ -0.52
KARS-204ENST00000564578 OR2W5A6NFC9 320 aa11.78□□□□□ -0.52
KARS-204ENST00000564578 KLK10O43240 276 aa11.78□□□□□ -0.52
KARS-204ENST00000564578 SKAP2O75563 359 aaPredicted RBP11.78□□□□□ -0.52
KARS-204ENST00000564578 ATP6AP2O75787 350 aa11.78□□□□□ -0.52
KARS-204ENST00000564578 BMP10O95393 424 aa11.78□□□□□ -0.52
KARS-204ENST00000564578 CHEK2O96017 543 aa11.78□□□□□ -0.52
KARS-204ENST00000564578 RAB40ALP0C0E4 278 aa11.78□□□□□ -0.52
KARS-204ENST00000564578 SSR2P43308 183 aa11.78□□□□□ -0.52
KARS-204ENST00000564578 RAP1GDS1P52306 607 aa11.78□□□□□ -0.52
KARS-204ENST00000564578 LIM2P55344 173 aa11.78□□□□□ -0.52
KARS-204ENST00000564578 RPS18P62269 152 aaKnown RBP11.78□□□□□ -0.52
KARS-204ENST00000564578 RAE1P78406 368 aaKnown RBP11.78□□□□□ -0.52
KARS-204ENST00000564578 BTKQ06187 659 aa11.78□□□□□ -0.52
KARS-204ENST00000564578 TGM3Q08188 693 aa11.78□□□□□ -0.52
KARS-204ENST00000564578 DNASE1L3Q13609 305 aa11.78□□□□□ -0.52
KARS-204ENST00000564578 ERV3-1Q14264 604 aa11.78□□□□□ -0.52
KARS-204ENST00000564578 MRM1Q6IN84 353 aaKnown RBP11.78□□□□□ -0.52
KARS-204ENST00000564578 CA13Q8N1Q1 262 aa11.78□□□□□ -0.52
KARS-204ENST00000564578 ZCCHC7Q8N3Z6 543 aaKnown RBP11.78□□□□□ -0.52
KARS-204ENST00000564578 ENDOVQ8N8Q3 282 aaKnown RBP11.78□□□□□ -0.52
KARS-204ENST00000564578 KDF1Q8NAX2 398 aaPredicted RBP11.78□□□□□ -0.52
KARS-204ENST00000564578 PEX11GQ96HA9 241 aa11.78□□□□□ -0.52
KARS-204ENST00000564578 CENPKQ9BS16 269 aa11.78□□□□□ -0.52
KARS-204ENST00000564578 NPLQ9BXD5 320 aaPredicted RBP11.78□□□□□ -0.52
KARS-204ENST00000564578 GPR87Q9BY21 358 aa11.78□□□□□ -0.52
KARS-204ENST00000564578 DPH1Q9BZG8 443 aa11.78□□□□□ -0.52
KARS-204ENST00000564578 TGIF2Q9GZN2 237 aa11.78□□□□□ -0.52
KARS-204ENST00000564578 CLK4Q9HAZ1 481 aaKnown RBP11.78□□□□□ -0.52
KARS-204ENST00000564578 FAM53CQ9NYF3 392 aa11.78□□□□□ -0.52
KARS-204ENST00000564578 MARCOQ9UEW3 520 aaPredicted RBP11.78□□□□□ -0.52
KARS-204ENST00000564578 DAPP1Q9UN19 280 aa11.78□□□□□ -0.52
KARS-204ENST00000564578 FARSAQ9Y285 508 aaKnown RBP11.78□□□□□ -0.52
KARS-204ENST00000564578 PTPRQQ9UMZ3 2332 aa11.78□□□□□ -0.52
KARS-204ENST00000564578 FAM227AF5H4B4 570 aa11.77□□□□□ -0.53
KARS-204ENST00000564578 CYR61O00622 381 aa11.77□□□□□ -0.53
KARS-204ENST00000564578 LSM1O15116 133 aaKnown RBP11.77□□□□□ -0.53
KARS-204ENST00000564578 B3GALT2O43825 422 aa11.77□□□□□ -0.53
KARS-204ENST00000564578 RSL1D1O76021 490 aaKnown RBP11.77□□□□□ -0.53
KARS-204ENST00000564578 KLK1P06870 262 aa11.77□□□□□ -0.53
KARS-204ENST00000564578 ZGLP1P0C6A0 271 aa11.77□□□□□ -0.53
KARS-204ENST00000564578 KITP10721 976 aa11.77□□□□□ -0.53
KARS-204ENST00000564578 PIM1P11309 404 aaPredicted RBP11.77□□□□□ -0.53
KARS-204ENST00000564578 PRPH2P23942 346 aa11.77□□□□□ -0.53
KARS-204ENST00000564578 PTPN4P29074 926 aa11.77□□□□□ -0.53
KARS-204ENST00000564578 XCR1P46094 333 aa11.77□□□□□ -0.53
KARS-204ENST00000564578 SLAMF1Q13291 335 aa11.77□□□□□ -0.53
KARS-204ENST00000564578 PDCD2Q16342 344 aaPredicted RBP11.77□□□□□ -0.53
KARS-204ENST00000564578 RFTN2Q52LD8 501 aaPredicted RBP11.77□□□□□ -0.53
KARS-204ENST00000564578 GALNT18Q6P9A2 607 aa11.77□□□□□ -0.53
KARS-204ENST00000564578 SHISA6Q6ZSJ9 500 aa11.77□□□□□ -0.53
KARS-204ENST00000564578 ZC3H7AQ8IWR0 971 aaKnown RBP11.77□□□□□ -0.53
KARS-204ENST00000564578 SPACA3Q8IXA5 215 aa11.77□□□□□ -0.53
KARS-204ENST00000564578 DDIASQ8IXT1 998 aa11.77□□□□□ -0.53
KARS-204ENST00000564578 FAM76AQ8TAV0 307 aa11.77□□□□□ -0.53
KARS-204ENST00000564578 ZCCHC14Q8WYQ9 949 aaKnown RBP11.77□□□□□ -0.53
KARS-204ENST00000564578 C19orf60Q96EN9 201 aa11.77□□□□□ -0.53
KARS-204ENST00000564578 MAPKAP1Q9BPZ7 522 aa11.77□□□□□ -0.53
KARS-204ENST00000564578 ROGDIQ9GZN7 287 aa11.77□□□□□ -0.53
KARS-204ENST00000564578 ACTL8Q9H568 366 aa11.77□□□□□ -0.53
KARS-204ENST00000564578 WDR54Q9H977 334 aa11.77□□□□□ -0.53
KARS-204ENST00000564578 GPN2Q9H9Y4 310 aaPredicted RBP11.77□□□□□ -0.53
KARS-204ENST00000564578 MKKSQ9NPJ1 570 aaPredicted RBP11.77□□□□□ -0.53
KARS-204ENST00000564578 NMRK1Q9NWW6 199 aa11.77□□□□□ -0.53
KARS-204ENST00000564578 GIMAP2Q9UG22 337 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms