RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 KIAA1524Q8TCG1 905 aa3.6□□□□□ -1.83
UBR1-205ENST00000564540 RIT1Q92963 219 aa3.6□□□□□ -1.83
UBR1-205ENST00000564540 EXOC4Q96A65 974 aa3.6□□□□□ -1.83
UBR1-205ENST00000564540 ALKBH3Q96Q83 286 aaPredicted RBP3.6□□□□□ -1.83
UBR1-205ENST00000564540 INPP5KQ9BT40 448 aa3.6□□□□□ -1.83
UBR1-205ENST00000564540 MARCH7Q9H992 704 aa3.6□□□□□ -1.83
UBR1-205ENST00000564540 ABCB10Q9NRK6 738 aa3.6□□□□□ -1.83
UBR1-205ENST00000564540 CLEC5AQ9NY25 188 aa3.6□□□□□ -1.83
UBR1-205ENST00000564540 ANAPC5Q9UJX4 755 aa3.6□□□□□ -1.83
UBR1-205ENST00000564540 ACSL4O60488 711 aa3.59□□□□□ -1.83
UBR1-205ENST00000564540 CALCAP01258 141 aa3.59□□□□□ -1.83
UBR1-205ENST00000564540 TIA1P31483 386 aaKnown RBP eCLIP3.59□□□□□ -1.833e-6■■■■□ 20.5
UBR1-205ENST00000564540 ELK3P41970 407 aa3.59□□□□□ -1.83
UBR1-205ENST00000564540 SLC1A3P43003 542 aa3.59□□□□□ -1.83
UBR1-205ENST00000564540 OR3A1P47881 315 aa3.59□□□□□ -1.83
UBR1-205ENST00000564540 RPS27AP62979 156 aaKnown RBP3.59□□□□□ -1.83
UBR1-205ENST00000564540 NHLRC3Q5JS37 347 aa3.59□□□□□ -1.83
UBR1-205ENST00000564540 ZNF506Q5JVG8 444 aa3.59□□□□□ -1.83
UBR1-205ENST00000564540 MUC21Q5SSG8 566 aa3.59□□□□□ -1.83
UBR1-205ENST00000564540 ATAD3CQ5T2N8 411 aa3.59□□□□□ -1.83
UBR1-205ENST00000564540 MEX3DQ86XN8 651 aaKnown RBP3.59□□□□□ -1.83
UBR1-205ENST00000564540 HIPK1Q86Z02 1210 aa3.59□□□□□ -1.83
UBR1-205ENST00000564540 CREBRFQ8IUR6 639 aa3.59□□□□□ -1.83
UBR1-205ENST00000564540 SLC43A2Q8N370 569 aa3.59□□□□□ -1.83
UBR1-205ENST00000564540 BANPQ8N9N5 519 aa3.59□□□□□ -1.83
UBR1-205ENST00000564540 OR1B1Q8NGR6 318 aa3.59□□□□□ -1.83
UBR1-205ENST00000564540 UBE2Q2Q8WVN8 375 aa3.59□□□□□ -1.83
UBR1-205ENST00000564540 LIPHQ8WWY8 451 aa3.59□□□□□ -1.83
UBR1-205ENST00000564540 INTS14Q96SY0 518 aa3.59□□□□□ -1.83
UBR1-205ENST00000564540 PINK1Q9BXM7 581 aa3.59□□□□□ -1.83
UBR1-205ENST00000564540 TERF2IPQ9NYB0 399 aa3.59□□□□□ -1.83
UBR1-205ENST00000564540 THYN1Q9P016 225 aa3.59□□□□□ -1.83
UBR1-205ENST00000564540 CELA1Q9UNI1 258 aa3.59□□□□□ -1.83
UBR1-205ENST00000564540 IGLON5A6NGN9 336 aa3.58□□□□□ -1.84
UBR1-205ENST00000564540 C5orf52A6NGY3 159 aa3.58□□□□□ -1.84
UBR1-205ENST00000564540 IGHG1P01857 330 aa3.58□□□□□ -1.84
UBR1-205ENST00000564540 HCKP08631 526 aa3.58□□□□□ -1.84
UBR1-205ENST00000564540 QDPRP09417 244 aa3.58□□□□□ -1.84
UBR1-205ENST00000564540 RPL9P32969 192 aaKnown RBP3.58□□□□□ -1.84
UBR1-205ENST00000564540 MATKP42679 507 aa3.58□□□□□ -1.84
UBR1-205ENST00000564540 RUNX3Q13761 415 aa3.58□□□□□ -1.84
UBR1-205ENST00000564540 Q1RN00 199 aa3.58□□□□□ -1.84
UBR1-205ENST00000564540 ARMCX4Q5H9R4 360 aa3.58□□□□□ -1.84
UBR1-205ENST00000564540 NEPROQ6NW34 567 aa3.58□□□□□ -1.84
UBR1-205ENST00000564540 SLFN11Q7Z7L1 901 aa3.58□□□□□ -1.84
UBR1-205ENST00000564540 SLC35C1Q96A29 364 aa3.58□□□□□ -1.84
UBR1-205ENST00000564540 BPIFA2Q96DR5 249 aa3.58□□□□□ -1.84
UBR1-205ENST00000564540 CNOT6LQ96LI5 555 aaKnown RBP3.58□□□□□ -1.84
UBR1-205ENST00000564540 RUNDC3BQ96NL0 473 aa3.58□□□□□ -1.84
UBR1-205ENST00000564540 PRMT1Q99873 361 aaKnown RBP3.58□□□□□ -1.84
UBR1-205ENST00000564540 FERMT1Q9BQL6 677 aa3.58□□□□□ -1.84
UBR1-205ENST00000564540 MTIF3Q9H2K0 278 aaKnown RBP3.58□□□□□ -1.84
UBR1-205ENST00000564540 LIME1Q9H400 295 aa3.58□□□□□ -1.84
UBR1-205ENST00000564540 ABCD2Q9UBJ2 740 aa3.58□□□□□ -1.84
UBR1-205ENST00000564540 B4GALT7Q9UBV7 327 aa3.58□□□□□ -1.84
UBR1-205ENST00000564540 UBQLN2Q9UHD9 624 aa3.58□□□□□ -1.84
UBR1-205ENST00000564540 GMEB2Q9UKD1 530 aa3.58□□□□□ -1.84
UBR1-205ENST00000564540 SPATA2Q9UM82 520 aa3.58□□□□□ -1.84
UBR1-205ENST00000564540 NIP7Q9Y221 180 aaKnown RBP eCLIP3.58□□□□□ -1.84
UBR1-205ENST00000564540 SH3GLB1Q9Y371 365 aa3.58□□□□□ -1.84
UBR1-205ENST00000564540 NAALAD2Q9Y3Q0 740 aa3.58□□□□□ -1.84
UBR1-205ENST00000564540 A0A0B4J203 849 aa3.57□□□□□ -1.84
UBR1-205ENST00000564540 HTR3EA5X5Y0 456 aa3.57□□□□□ -1.84
UBR1-205ENST00000564540 FBP2O00757 339 aa3.57□□□□□ -1.84
UBR1-205ENST00000564540 B4GAT1O43505 415 aa3.57□□□□□ -1.84
UBR1-205ENST00000564540 CENPBP07199 599 aaPredicted RBP3.57□□□□□ -1.84
UBR1-205ENST00000564540 VIMP08670 466 aaKnown RBP3.57□□□□□ -1.84
UBR1-205ENST00000564540 CAPZA1P52907 286 aa3.57□□□□□ -1.84
UBR1-205ENST00000564540 KRTAP10-8P60410 259 aa3.57□□□□□ -1.84
UBR1-205ENST00000564540 RPP38P78345 283 aaKnown RBP3.57□□□□□ -1.84
UBR1-205ENST00000564540 NDPQ00604 133 aa3.57□□□□□ -1.84
UBR1-205ENST00000564540 RBBP4Q09028 425 aa3.57□□□□□ -1.84
UBR1-205ENST00000564540 ABRQ12979 859 aa3.57□□□□□ -1.84
UBR1-205ENST00000564540 CDO1Q16878 200 aa3.57□□□□□ -1.84
UBR1-205ENST00000564540 TRAT1Q6PIZ9 186 aa3.57□□□□□ -1.84
UBR1-205ENST00000564540 RFPL4BQ6ZWI9 263 aa3.57□□□□□ -1.84
UBR1-205ENST00000564540 KRTAP11-1Q8IUC1 163 aa3.57□□□□□ -1.84
UBR1-205ENST00000564540 LRRC49Q8IUZ0 686 aa3.57□□□□□ -1.84
UBR1-205ENST00000564540 TIGD4Q8IY51 512 aa3.57□□□□□ -1.84
UBR1-205ENST00000564540 SMYD1Q8NB12 490 aa3.57□□□□□ -1.84
UBR1-205ENST00000564540 MRAPQ8TCY5 172 aa3.57□□□□□ -1.84
UBR1-205ENST00000564540 SAP25Q8TEE9 199 aa3.57□□□□□ -1.84
UBR1-205ENST00000564540 BSCL2Q96G97 398 aaPredicted RBP3.57□□□□□ -1.84
UBR1-205ENST00000564540 SERAC1Q96JX3 654 aa3.57□□□□□ -1.84
UBR1-205ENST00000564540 RCHY1Q96PM5 261 aa3.57□□□□□ -1.84
UBR1-205ENST00000564540 APOL2Q9BQE5 337 aa3.57□□□□□ -1.84
UBR1-205ENST00000564540 PFDN4Q9NQP4 134 aa3.57□□□□□ -1.84
UBR1-205ENST00000564540 PDRG1Q9NUG6 133 aa3.57□□□□□ -1.84
UBR1-205ENST00000564540 CLIC5Q9NZA1 410 aa3.57□□□□□ -1.84
UBR1-205ENST00000564540 SWAP70Q9UH65 585 aa3.57□□□□□ -1.84
UBR1-205ENST00000564540 HBS1LQ9Y450 684 aaKnown RBP3.57□□□□□ -1.84
UBR1-205ENST00000564540 TEX48A0A1B0GUV7 120 aa3.56□□□□□ -1.84
UBR1-205ENST00000564540 P2RX6O15547 441 aa3.56□□□□□ -1.84
UBR1-205ENST00000564540 SELENOFO60613 162 aa3.56□□□□□ -1.84
UBR1-205ENST00000564540 RPN1P04843 607 aaKnown RBP3.56□□□□□ -1.84
UBR1-205ENST00000564540 FOLH1Q04609 750 aa3.56□□□□□ -1.84
UBR1-205ENST00000564540 KRTAP13-3Q3SY46 172 aa3.56□□□□□ -1.84
UBR1-205ENST00000564540 SPOUT1Q5T280 376 aaKnown RBP3.56□□□□□ -1.84
UBR1-205ENST00000564540 CCBE1Q6UXH8 406 aaPredicted RBP3.56□□□□□ -1.84
UBR1-205ENST00000564540 PHLDB2Q86SQ0 1253 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms