RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 HIST2H2ACQ16777 129 aaPredicted RBP18.71■□□□□ 0.59
SHCBP1-203ENST00000564272 MEP1AQ16819 746 aa18.71■□□□□ 0.59
SHCBP1-203ENST00000564272 HIST2H2AA3Q6FI13 130 aa18.71■□□□□ 0.59
SHCBP1-203ENST00000564272 TUBA3EQ6PEY2 450 aa18.71■□□□□ 0.59
SHCBP1-203ENST00000564272 SCUBE1Q8IWY4 988 aa18.71■□□□□ 0.59
SHCBP1-203ENST00000564272 SLC5A8Q8N695 610 aa18.71■□□□□ 0.59
SHCBP1-203ENST00000564272 TEX9Q8N6V9 391 aa18.71■□□□□ 0.59
SHCBP1-203ENST00000564272 ARMC2Q8NEN0 867 aa18.71■□□□□ 0.59
SHCBP1-203ENST00000564272 RHEBL1Q8TAI7 183 aa18.71■□□□□ 0.59
SHCBP1-203ENST00000564272 SUN3Q8TAQ9 357 aa18.71■□□□□ 0.59
SHCBP1-203ENST00000564272 ELP5Q8TE02 316 aa18.71■□□□□ 0.59
SHCBP1-203ENST00000564272 SLC44A1Q8WWI5 657 aa18.71■□□□□ 0.59
SHCBP1-203ENST00000564272 GPR78Q96P69 363 aa18.71■□□□□ 0.59
SHCBP1-203ENST00000564272 CSF3RQ99062 836 aa18.71■□□□□ 0.59
SHCBP1-203ENST00000564272 VPS11Q9H270 941 aa18.71■□□□□ 0.59
SHCBP1-203ENST00000564272 COPS7BQ9H9Q2 264 aaPredicted RBP18.71■□□□□ 0.59
SHCBP1-203ENST00000564272 PRM3Q9NNZ6 103 aa18.71■□□□□ 0.59
SHCBP1-203ENST00000564272 MMACHCQ9Y4U1 282 aa18.71■□□□□ 0.59
SHCBP1-203ENST00000564272 ICE1Q9Y2F5 2266 aa18.71■□□□□ 0.59
SHCBP1-203ENST00000564272 LRRC14BA6NHZ5 514 aa18.7■□□□□ 0.58
SHCBP1-203ENST00000564272 TGFBR3LH3BV60 316 aa18.7■□□□□ 0.58
SHCBP1-203ENST00000564272 SH3BGRLO75368 114 aa18.7■□□□□ 0.58
SHCBP1-203ENST00000564272 KLHL2O95198 593 aa18.7■□□□□ 0.58
SHCBP1-203ENST00000564272 GP1BBP13224 206 aa18.7■□□□□ 0.58
SHCBP1-203ENST00000564272 GFAPP14136 432 aa18.7■□□□□ 0.58
SHCBP1-203ENST00000564272 HPDP32754 393 aaPredicted RBP18.7■□□□□ 0.58
SHCBP1-203ENST00000564272 MTTPP55157 894 aa18.7■□□□□ 0.58
SHCBP1-203ENST00000564272 LIM2P55344 173 aa18.7■□□□□ 0.58
SHCBP1-203ENST00000564272 SETDB1Q15047 1291 aa18.7■□□□□ 0.58
SHCBP1-203ENST00000564272 ACAP2Q15057 778 aa18.7■□□□□ 0.58
SHCBP1-203ENST00000564272 PFKFB4Q16877 469 aa18.7■□□□□ 0.58
SHCBP1-203ENST00000564272 GLE1Q53GS7 698 aaKnown RBP18.7■□□□□ 0.58
SHCBP1-203ENST00000564272 ZNF324BQ6AW86 544 aaPredicted RBP18.7■□□□□ 0.58
SHCBP1-203ENST00000564272 MED27Q6P2C8 311 aa18.7■□□□□ 0.58
SHCBP1-203ENST00000564272 UBE3DQ7Z6J8 389 aa18.7■□□□□ 0.58
SHCBP1-203ENST00000564272 CLNKQ7Z7G1 428 aa18.7■□□□□ 0.58
SHCBP1-203ENST00000564272 UHMK1Q8TAS1 419 aaKnown RBP18.7■□□□□ 0.58
SHCBP1-203ENST00000564272 ZNF473Q8WTR7 871 aaKnown RBP18.7■□□□□ 0.58
SHCBP1-203ENST00000564272 SIGLEC12Q96PQ1 595 aa18.7■□□□□ 0.58
SHCBP1-203ENST00000564272 SERINC2Q96SA4 455 aa18.7■□□□□ 0.58
SHCBP1-203ENST00000564272 PAFAH2Q99487 392 aa18.7■□□□□ 0.58
SHCBP1-203ENST00000564272 MS4A8Q9BY19 250 aa18.7■□□□□ 0.58
SHCBP1-203ENST00000564272 PRTFDC1Q9NRG1 225 aa18.7■□□□□ 0.58
SHCBP1-203ENST00000564272 ABI3Q9P2A4 366 aa18.7■□□□□ 0.58
SHCBP1-203ENST00000564272 CPSF2Q9P2I0 782 aaKnown RBP18.7■□□□□ 0.58
SHCBP1-203ENST00000564272 POLEQ07864 2286 aa18.7■□□□□ 0.58
SHCBP1-203ENST00000564272 GABRR3A8MPY1 467 aa18.69■□□□□ 0.58
SHCBP1-203ENST00000564272 KIF2AO00139 706 aaPredicted RBP18.69■□□□□ 0.58
SHCBP1-203ENST00000564272 INHBAP08476 426 aa18.69■□□□□ 0.58
SHCBP1-203ENST00000564272 EPB42P16452 691 aa18.69■□□□□ 0.58
SHCBP1-203ENST00000564272 PPP2R1BP30154 601 aa18.69■□□□□ 0.58
SHCBP1-203ENST00000564272 CD96P40200 585 aa18.69■□□□□ 0.58
SHCBP1-203ENST00000564272 TDGF1P3P51864 188 aa18.69■□□□□ 0.58
SHCBP1-203ENST00000564272 PMP22Q01453 160 aa18.69■□□□□ 0.58
SHCBP1-203ENST00000564272 ZNF766Q5HY98 468 aa18.69■□□□□ 0.58
SHCBP1-203ENST00000564272 KLC3Q6P597 504 aa18.69■□□□□ 0.58
SHCBP1-203ENST00000564272 ZNF793Q6ZN11 406 aa18.69■□□□□ 0.58
SHCBP1-203ENST00000564272 LAS2Q8IYD9 372 aa18.69■□□□□ 0.58
SHCBP1-203ENST00000564272 PLD6Q8N2A8 252 aaKnown RBP18.69■□□□□ 0.58
SHCBP1-203ENST00000564272 MDS2Q8NDY4 140 aa18.69■□□□□ 0.58
SHCBP1-203ENST00000564272 NFAM1Q8NET5 270 aaPredicted RBP18.69■□□□□ 0.58
SHCBP1-203ENST00000564272 ADAMTS18Q8TE60 1221 aa18.69■□□□□ 0.58
SHCBP1-203ENST00000564272 NR4A3Q92570 626 aa18.69■□□□□ 0.58
SHCBP1-203ENST00000564272 UTP23Q9BRU9 249 aaKnown RBP18.69■□□□□ 0.58
SHCBP1-203ENST00000564272 HES7Q9BYE0 225 aa18.69■□□□□ 0.58
SHCBP1-203ENST00000564272 TSPYL1Q9H0U9 437 aa18.69■□□□□ 0.58
SHCBP1-203ENST00000564272 CDCP1Q9H5V8 836 aa18.69■□□□□ 0.58
SHCBP1-203ENST00000564272 PRDM7Q9NQW5 492 aa18.69■□□□□ 0.58
SHCBP1-203ENST00000564272 PNO1Q9NRX1 252 aaKnown RBP18.69■□□□□ 0.58
SHCBP1-203ENST00000564272 DAPP1Q9UN19 280 aa18.69■□□□□ 0.58
SHCBP1-203ENST00000564272 OSGIN2Q9Y236 505 aa18.69■□□□□ 0.58
SHCBP1-203ENST00000564272 SLC5A6Q9Y289 635 aa18.69■□□□□ 0.58
SHCBP1-203ENST00000564272 ANGPTL3Q9Y5C1 460 aa18.69■□□□□ 0.58
SHCBP1-203ENST00000564272 CLDN16Q9Y5I7 305 aa18.69■□□□□ 0.58
SHCBP1-203ENST00000564272 UTP20O75691 2785 aaKnown RBP18.69■□□□□ 0.58
SHCBP1-203ENST00000564272 ZGRF1Q86YA3 2104 aa18.68■□□□□ 0.58
SHCBP1-203ENST00000564272 CCDC189A1A4V9 331 aa18.68■□□□□ 0.58
SHCBP1-203ENST00000564272 RTCAO00442 366 aaKnown RBP18.68■□□□□ 0.58
SHCBP1-203ENST00000564272 KLK8O60259 260 aa18.68■□□□□ 0.58
SHCBP1-203ENST00000564272 MYO1DO94832 1006 aa18.68■□□□□ 0.58
SHCBP1-203ENST00000564272 RASAL1O95294 804 aa18.68■□□□□ 0.58
SHCBP1-203ENST00000564272 TUBB4AP04350 444 aa18.68■□□□□ 0.58
SHCBP1-203ENST00000564272 MAGEA12P43365 314 aa18.68■□□□□ 0.58
SHCBP1-203ENST00000564272 ALDH18A1P54886 795 aaKnown RBP18.68■□□□□ 0.58
SHCBP1-203ENST00000564272 PCDH1Q08174 1060 aa18.68■□□□□ 0.58
SHCBP1-203ENST00000564272 TGM3Q08188 693 aa18.68■□□□□ 0.58
SHCBP1-203ENST00000564272 SLC13A2Q13183 592 aa18.68■□□□□ 0.58
SHCBP1-203ENST00000564272 NAA30Q147X3 362 aaPredicted RBP18.68■□□□□ 0.58
SHCBP1-203ENST00000564272 OR1C1Q15619 314 aa18.68■□□□□ 0.58
SHCBP1-203ENST00000564272 TECRLQ5HYJ1 363 aa18.68■□□□□ 0.58
SHCBP1-203ENST00000564272 HIST2H2BCQ6DN03 193 aa18.68■□□□□ 0.58
SHCBP1-203ENST00000564272 GRHL2Q6ISB3 625 aa18.68■□□□□ 0.58
SHCBP1-203ENST00000564272 MYLK4Q86YV6 388 aaPredicted RBP18.68■□□□□ 0.58
SHCBP1-203ENST00000564272 RNF175Q8N4F7 328 aa18.68■□□□□ 0.58
SHCBP1-203ENST00000564272 OR7G3Q8NG95 312 aa18.68■□□□□ 0.58
SHCBP1-203ENST00000564272 UBE2E3Q969T4 207 aa18.68■□□□□ 0.58
SHCBP1-203ENST00000564272 KCNC2Q96PR1 638 aa18.68■□□□□ 0.58
SHCBP1-203ENST00000564272 ZNF358Q9NW07 568 aa18.68■□□□□ 0.58
SHCBP1-203ENST00000564272 A1L4Q6 167 aa18.67■□□□□ 0.58
SHCBP1-203ENST00000564272 POC1B-GALNT4F8VUJ3 575 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms