RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 TEKT2Q9UIF3 430 aa28.86■■■□□ 2.21
CMTM4-204ENST00000563952 COPG1Q9Y678 874 aaKnown RBP28.86■■■□□ 2.21
CMTM4-204ENST00000563952 TGFB1P01137 390 aa28.85■■■□□ 2.21
CMTM4-204ENST00000563952 EEF1DP29692 281 aaKnown RBP28.85■■■□□ 2.21
CMTM4-204ENST00000563952 FCRLBQ6BAA4 426 aa28.85■■■□□ 2.21
CMTM4-204ENST00000563952 FAM47BQ8NA70 645 aa28.85■■■□□ 2.21
CMTM4-204ENST00000563952 OR1N1Q8NGS0 311 aa28.85■■■□□ 2.21
CMTM4-204ENST00000563952 KCNC2Q96PR1 638 aa28.85■■■□□ 2.21
CMTM4-204ENST00000563952 TXLNGYQ9BZA5 131 aa28.85■■■□□ 2.21
CMTM4-204ENST00000563952 IPPKQ9H8X2 491 aa28.85■■■□□ 2.21
CMTM4-204ENST00000563952 L2HGDHQ9H9P8 463 aa28.85■■■□□ 2.21
CMTM4-204ENST00000563952 PRDM7Q9NQW5 492 aa28.85■■■□□ 2.21
CMTM4-204ENST00000563952 STMN3Q9NZ72 180 aa28.85■■■□□ 2.21
CMTM4-204ENST00000563952 E2F3O00716 465 aa28.84■■■□□ 2.21
CMTM4-204ENST00000563952 SMIM24O75264 130 aa28.84■■■□□ 2.21
CMTM4-204ENST00000563952 WDPCPO95876 746 aa28.84■■■□□ 2.21
CMTM4-204ENST00000563952 SERPINB1P30740 379 aa28.84■■■□□ 2.21
CMTM4-204ENST00000563952 ARL1P40616 181 aaPredicted RBP28.84■■■□□ 2.21
CMTM4-204ENST00000563952 PIK3CGP48736 1102 aa28.84■■■□□ 2.21
CMTM4-204ENST00000563952 SLC26A5P58743 744 aa28.84■■■□□ 2.21
CMTM4-204ENST00000563952 SLC29A2Q14542 456 aa28.84■■■□□ 2.21
CMTM4-204ENST00000563952 ADGRD1Q6QNK2 874 aa28.84■■■□□ 2.21
CMTM4-204ENST00000563952 RNF175Q8N4F7 328 aa28.84■■■□□ 2.21
CMTM4-204ENST00000563952 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP28.84■■■□□ 2.21
CMTM4-204ENST00000563952 MMP25Q9NPA2 562 aa28.84■■■□□ 2.21
CMTM4-204ENST00000563952 TMCO1Q9UM00 188 aa28.84■■■□□ 2.21
CMTM4-204ENST00000563952 NTNG1Q9Y2I2 539 aa28.84■■■□□ 2.21
CMTM4-204ENST00000563952 MMACHCQ9Y4U1 282 aa28.84■■■□□ 2.21
CMTM4-204ENST00000563952 CNTRLQ7Z7A1 2325 aa28.83■■■□□ 2.21
CMTM4-204ENST00000563952 IGKV3D-11A0A0A0MRZ8 115 aa28.83■■■□□ 2.21
CMTM4-204ENST00000563952 TCRBV16S1A1N1A0A5B0 115 aa28.83■■■□□ 2.21
CMTM4-204ENST00000563952 A8MUA0 341 aa28.83■■■□□ 2.21
CMTM4-204ENST00000563952 TCP11X1B4DZS4 312 aa28.83■■■□□ 2.21
CMTM4-204ENST00000563952 SAP18O00422 153 aaKnown RBP28.83■■■□□ 2.21
CMTM4-204ENST00000563952 RTCAO00442 366 aaKnown RBP28.83■■■□□ 2.21
CMTM4-204ENST00000563952 TSFMP43897 325 aaKnown RBP28.83■■■□□ 2.21
CMTM4-204ENST00000563952 LIM2P55344 173 aa28.83■■■□□ 2.21
CMTM4-204ENST00000563952 TMEM35AQ53FP2 167 aa28.83■■■□□ 2.21
CMTM4-204ENST00000563952 LIPJQ5W064 366 aa28.83■■■□□ 2.21
CMTM4-204ENST00000563952 CHSY3Q70JA7 882 aa28.83■■■□□ 2.21
CMTM4-204ENST00000563952 UBE3DQ7Z6J8 389 aa28.83■■■□□ 2.21
CMTM4-204ENST00000563952 SRFBP1Q8NEF9 429 aaKnown RBP28.83■■■□□ 2.21
CMTM4-204ENST00000563952 HUS1BQ8NHY5 278 aa28.83■■■□□ 2.21
CMTM4-204ENST00000563952 ADAMTS18Q8TE60 1221 aa28.83■■■□□ 2.21
CMTM4-204ENST00000563952 HAS2Q92819 552 aa28.83■■■□□ 2.21
CMTM4-204ENST00000563952 CMTM7Q96FZ5 175 aa28.83■■■□□ 2.21
CMTM4-204ENST00000563952 TBCDQ9BTW9 1192 aa28.83■■■□□ 2.21
CMTM4-204ENST00000563952 ROGDIQ9GZN7 287 aa28.83■■■□□ 2.21
CMTM4-204ENST00000563952 OR51B5Q9H339 312 aa28.83■■■□□ 2.21
CMTM4-204ENST00000563952 PRTFDC1Q9NRG1 225 aa28.83■■■□□ 2.21
CMTM4-204ENST00000563952 MYBL2P10244 700 aa28.82■■■□□ 2.2
CMTM4-204ENST00000563952 TNFSF10P50591 281 aa28.82■■■□□ 2.2
CMTM4-204ENST00000563952 HNRNPFP52597 415 aaKnown RBP28.82■■■□□ 2.2
CMTM4-204ENST00000563952 SLC13A2Q13183 592 aa28.82■■■□□ 2.2
CMTM4-204ENST00000563952 METTL2BQ6P1Q9 378 aaKnown RBP28.82■■■□□ 2.2
CMTM4-204ENST00000563952 TMEM52Q8NDY8 209 aa28.82■■■□□ 2.2
CMTM4-204ENST00000563952 MTBPQ96DY7 904 aa28.82■■■□□ 2.2
CMTM4-204ENST00000563952 ZNF354BQ96LW1 612 aa28.82■■■□□ 2.2
CMTM4-204ENST00000563952 CSF3RQ99062 836 aa28.82■■■□□ 2.2
CMTM4-204ENST00000563952 MTERF1Q99551 399 aaKnown RBP28.82■■■□□ 2.2
CMTM4-204ENST00000563952 MRPL57Q9BQC6 102 aaKnown RBP28.82■■■□□ 2.2
CMTM4-204ENST00000563952 MRPL46Q9H2W6 279 aaKnown RBP28.82■■■□□ 2.2
CMTM4-204ENST00000563952 NOL11Q9H8H0 719 aaKnown RBP28.82■■■□□ 2.2
CMTM4-204ENST00000563952 ADGRE2Q9UHX3 823 aa28.82■■■□□ 2.2
CMTM4-204ENST00000563952 DAPP1Q9UN19 280 aa28.82■■■□□ 2.2
CMTM4-204ENST00000563952 MRPS33Q9Y291 106 aaKnown RBP28.82■■■□□ 2.2
CMTM4-204ENST00000563952 PCDHGA11Q9Y5H2 935 aa28.82■■■□□ 2.2
CMTM4-204ENST00000563952 CLDN4O14493 209 aa28.81■■■□□ 2.2
CMTM4-204ENST00000563952 NR6A1Q15406 480 aa28.81■■■□□ 2.2
CMTM4-204ENST00000563952 CPSF6Q16630 551 aaKnown RBP eCLIP28.81■■■□□ 2.2
CMTM4-204ENST00000563952 ACER2Q5QJU3 275 aa28.81■■■□□ 2.2
CMTM4-204ENST00000563952 KHDRBS2Q5VWX1 349 aaKnown RBP28.81■■■□□ 2.2
CMTM4-204ENST00000563952 H3F3CQ6NXT2 135 aa28.81■■■□□ 2.2
CMTM4-204ENST00000563952 ZNF793Q6ZN11 406 aa28.81■■■□□ 2.2
CMTM4-204ENST00000563952 ATP6V1E2Q96A05 226 aa28.81■■■□□ 2.2
CMTM4-204ENST00000563952 EPB41L4BQ9H329 900 aa28.81■■■□□ 2.2
CMTM4-204ENST00000563952 RNF11Q9Y3C5 154 aa28.81■■■□□ 2.2
CMTM4-204ENST00000563952 SAGE2PA6NJ88 616 aa28.8■■■□□ 2.2
CMTM4-204ENST00000563952 STX16-NPEPL1H3BU86 382 aa28.8■■■□□ 2.2
CMTM4-204ENST00000563952 STX16O14662 325 aa28.8■■■□□ 2.2
CMTM4-204ENST00000563952 UGDHO60701 494 aa28.8■■■□□ 2.2
CMTM4-204ENST00000563952 ATP5A1P25705 553 aaKnown RBP28.8■■■□□ 2.2
CMTM4-204ENST00000563952 SSR2P43308 183 aa28.8■■■□□ 2.2
CMTM4-204ENST00000563952 HSD17B7P56937 341 aa28.8■■■□□ 2.2
CMTM4-204ENST00000563952 TAS2R50P59544 299 aa28.8■■■□□ 2.2
CMTM4-204ENST00000563952 MRPL49Q13405 166 aaKnown RBP28.8■■■□□ 2.2
CMTM4-204ENST00000563952 RCN2Q14257 317 aa28.8■■■□□ 2.2
CMTM4-204ENST00000563952 AP5B1Q2VPB7 878 aa28.8■■■□□ 2.2
CMTM4-204ENST00000563952 TIFABQ6ZNK6 161 aa28.8■■■□□ 2.2
CMTM4-204ENST00000563952 CLNKQ7Z7G1 428 aa28.8■■■□□ 2.2
CMTM4-204ENST00000563952 CRLF3Q8IUI8 442 aa28.8■■■□□ 2.2
CMTM4-204ENST00000563952 SCUBE1Q8IWY4 988 aa28.8■■■□□ 2.2
CMTM4-204ENST00000563952 BEST3Q8N1M1 668 aa28.8■■■□□ 2.2
CMTM4-204ENST00000563952 KIF2BQ8N4N8 673 aa28.8■■■□□ 2.2
CMTM4-204ENST00000563952 ACOT4Q8N9L9 421 aa28.8■■■□□ 2.2
CMTM4-204ENST00000563952 REPS1Q96D71 796 aa28.8■■■□□ 2.2
CMTM4-204ENST00000563952 CDK15Q96Q40 435 aa28.8■■■□□ 2.2
CMTM4-204ENST00000563952 RNF32Q9H0A6 362 aa28.8■■■□□ 2.2
CMTM4-204ENST00000563952 DMRT3Q9NQL9 472 aa28.8■■■□□ 2.2
CMTM4-204ENST00000563952 ASH1LQ9NR48 2969 aaKnown RBP28.8■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms