RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 DUSP11O75319 330 aaKnown RBP4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 CLPXO76031 633 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 PLA2G1BP04054 148 aaKnown RBP4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 ELANEP08246 267 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 PPP3CBP16298 524 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 TGM2P21980 687 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 CD1BP29016 333 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 PRDX2P32119 198 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 CHI3L1P36222 383 aaPredicted RBP4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 NSFP46459 744 aaKnown RBP4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 CYP2J2P51589 502 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 CLDN8P56748 225 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 RPS6P62753 249 aaKnown RBP4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 CBX1P83916 185 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 ITIH3Q06033 890 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 DSC1Q08554 894 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 TOB2Q14106 344 aaPredicted RBP4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 KRT31Q15323 416 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 CNGA3Q16281 694 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 SYTL3Q4VX76 610 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 PRR31Q5SQ13 230 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 PRAMEF19Q5SWL8 479 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 AGBL2Q5U5Z8 902 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 NSUN5P2Q63ZY6 315 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 ASPHD2Q6ICH7 369 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 C6orf89Q6UWU4 347 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 STOX1Q6ZVD7 989 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 PAQR9Q6ZVX9 377 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 B3GNT8Q7Z7M8 397 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 ANKRD46Q86W74 232 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 C1QL4Q86Z23 238 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 BLIDQ8IZY5 108 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 GCNT2Q8N0V5 402 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 ARHGAP24Q8N264 748 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 C12orf76Q8N812 135 aaPredicted RBP4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 CD99L2Q8TCZ2 262 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 SLC2A14Q8TDB8 520 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 DDI1Q8WTU0 396 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 MCHR2Q969V1 340 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 FBXL8Q96CD0 374 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 MSANTD3Q96H12 275 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 FAM20AQ96MK3 541 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 SMC6Q96SB8 1091 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 NPY6RQ99463 290 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 ALKBH7Q9BT30 221 aaPredicted RBP4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 WWTR1Q9GZV5 400 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 IQCGQ9H095 443 aaKnown RBP4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 WWP1Q9H0M0 922 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 TRPV6Q9H1D0 765 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 MTIF3Q9H2K0 278 aaKnown RBP4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 ZFP14Q9HCL3 533 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 MRPL17Q9NRX2 175 aaKnown RBP4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 NRBP2Q9NSY0 501 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 PDP1Q9P0J1 537 aaPredicted RBP4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 RHCGQ9UBD6 479 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 OR14J1Q9UGF5 321 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 PCDHA7Q9UN72 937 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 SLC9A8Q9Y2E8 581 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 ZDHHC9Q9Y397 364 aa4.92□□□□□ -1.62
VPS35P1-201ENST00000563400 SSC5DA1L4H1 1573 aa4.91□□□□□ -1.62
VPS35P1-201ENST00000563400 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.91□□□□□ -1.62
VPS35P1-201ENST00000563400 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.91□□□□□ -1.62
VPS35P1-201ENST00000563400 MYADML2A6NDP7 307 aa4.91□□□□□ -1.62
VPS35P1-201ENST00000563400 TTC34A8MYJ7 566 aa4.91□□□□□ -1.62
VPS35P1-201ENST00000563400 PRSS46E5RG02 174 aa4.91□□□□□ -1.62
VPS35P1-201ENST00000563400 F8VZ95 297 aa4.91□□□□□ -1.62
VPS35P1-201ENST00000563400 ABCD4O14678 606 aa4.91□□□□□ -1.62
VPS35P1-201ENST00000563400 CYP7B1O75881 506 aa4.91□□□□□ -1.62
VPS35P1-201ENST00000563400 LUC7L3O95232 432 aaKnown RBP4.91□□□□□ -1.62
VPS35P1-201ENST00000563400 TOP3BO95985 862 aaKnown RBP4.91□□□□□ -1.62
VPS35P1-201ENST00000563400 GSRP00390 522 aa4.91□□□□□ -1.62
VPS35P1-201ENST00000563400 IL6RP08887 468 aaPredicted RBP4.91□□□□□ -1.62
VPS35P1-201ENST00000563400 RRASP10301 218 aa4.91□□□□□ -1.62
VPS35P1-201ENST00000563400 CEBPBP17676 345 aa4.91□□□□□ -1.62
VPS35P1-201ENST00000563400 CTNNA2P26232 953 aa4.91□□□□□ -1.62
VPS35P1-201ENST00000563400 ANXA13P27216 316 aa4.91□□□□□ -1.62
VPS35P1-201ENST00000563400 CTGFP29279 349 aa4.91□□□□□ -1.62
VPS35P1-201ENST00000563400 MARCKSP29966 332 aaPredicted RBP4.91□□□□□ -1.62
VPS35P1-201ENST00000563400 GRIA1P42261 906 aa4.91□□□□□ -1.62
VPS35P1-201ENST00000563400 MYL6P60660 151 aa4.91□□□□□ -1.62
VPS35P1-201ENST00000563400 SIM1P81133 766 aaPredicted RBP4.91□□□□□ -1.62
VPS35P1-201ENST00000563400 NHLH2Q02577 135 aa4.91□□□□□ -1.62
VPS35P1-201ENST00000563400 GHRHRQ02643 423 aa4.91□□□□□ -1.62
VPS35P1-201ENST00000563400 SLC34A1Q06495 639 aa4.91□□□□□ -1.62
VPS35P1-201ENST00000563400 SELPLGQ14242 412 aa4.91□□□□□ -1.62
VPS35P1-201ENST00000563400 KLHL40Q2TBA0 621 aa4.91□□□□□ -1.62
VPS35P1-201ENST00000563400 ESCO2Q56NI9 601 aa4.91□□□□□ -1.62
VPS35P1-201ENST00000563400 FAM46CQ5VWP2 391 aa4.91□□□□□ -1.62
VPS35P1-201ENST00000563400 FOXR2Q6PJQ5 311 aa4.91□□□□□ -1.62
VPS35P1-201ENST00000563400 DLK2Q6UY11 383 aa4.91□□□□□ -1.62
VPS35P1-201ENST00000563400 MEX3DQ86XN8 651 aaKnown RBP4.91□□□□□ -1.62
VPS35P1-201ENST00000563400 DSELQ8IZU8 1212 aa4.91□□□□□ -1.62
VPS35P1-201ENST00000563400 SYCE1Q8N0S2 351 aa4.91□□□□□ -1.62
VPS35P1-201ENST00000563400 PARP16Q8N5Y8 322 aa4.91□□□□□ -1.62
VPS35P1-201ENST00000563400 LINC00482Q8N8I6 264 aa4.91□□□□□ -1.62
VPS35P1-201ENST00000563400 NECAB1Q8N987 351 aa4.91□□□□□ -1.62
VPS35P1-201ENST00000563400 SLC26A7Q8TE54 656 aa4.91□□□□□ -1.62
VPS35P1-201ENST00000563400 SAP25Q8TEE9 199 aa4.91□□□□□ -1.62
VPS35P1-201ENST00000563400 KAT2BQ92831 832 aa4.91□□□□□ -1.62
VPS35P1-201ENST00000563400 MOB3AQ96BX8 217 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms