RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 ARFIP1P53367 373 aa17.15■□□□□ 0.34
COMMD4-208ENST00000563220 TRA2BP62995 288 aaKnown RBP17.15■□□□□ 0.34
COMMD4-208ENST00000563220 SLAMF1Q13291 335 aa17.15■□□□□ 0.34
COMMD4-208ENST00000563220 BIRC2Q13490 618 aa17.15■□□□□ 0.34
COMMD4-208ENST00000563220 SIM2Q14190 667 aaPredicted RBP17.15■□□□□ 0.34
COMMD4-208ENST00000563220 HEPACAMQ14CZ8 416 aa17.15■□□□□ 0.34
COMMD4-208ENST00000563220 MRM1Q6IN84 353 aaKnown RBP17.15■□□□□ 0.34
COMMD4-208ENST00000563220 TRIM40Q6P9F5 258 aa17.15■□□□□ 0.34
COMMD4-208ENST00000563220 CALHM3Q86XJ0 350 aa17.15■□□□□ 0.34
COMMD4-208ENST00000563220 SRFBP1Q8NEF9 429 aaKnown RBP17.15■□□□□ 0.34
COMMD4-208ENST00000563220 THAP11Q96EK4 314 aa17.15■□□□□ 0.34
COMMD4-208ENST00000563220 LRGUKQ96M69 825 aa17.15■□□□□ 0.34
COMMD4-208ENST00000563220 ELF4Q99607 663 aaPredicted RBP17.15■□□□□ 0.34
COMMD4-208ENST00000563220 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.15■□□□□ 0.34
COMMD4-208ENST00000563220 IL21RQ9HBE5 538 aa17.15■□□□□ 0.34
COMMD4-208ENST00000563220 C5AR2Q9P296 337 aa17.15■□□□□ 0.34
COMMD4-208ENST00000563220 ASB4Q9Y574 426 aa17.15■□□□□ 0.34
COMMD4-208ENST00000563220 C1orf226A1L170 272 aa17.14■□□□□ 0.33
COMMD4-208ENST00000563220 H0YGG7 62 aa17.14■□□□□ 0.33
COMMD4-208ENST00000563220 CLIC1O00299 241 aa17.14■□□□□ 0.33
COMMD4-208ENST00000563220 TBX19O60806 448 aa17.14■□□□□ 0.33
COMMD4-208ENST00000563220 STAMBPO95630 424 aa17.14■□□□□ 0.33
COMMD4-208ENST00000563220 C6orf47O95873 294 aa17.14■□□□□ 0.33
COMMD4-208ENST00000563220 PROS1P07225 676 aa17.14■□□□□ 0.33
COMMD4-208ENST00000563220 ENGP17813 658 aa17.14■□□□□ 0.33
COMMD4-208ENST00000563220 ALDH9A1P49189 494 aa17.14■□□□□ 0.33
COMMD4-208ENST00000563220 ARF3P61204 181 aaPredicted RBP17.14■□□□□ 0.33
COMMD4-208ENST00000563220 HBA1P69905 142 aa17.14■□□□□ 0.33
COMMD4-208ENST00000563220 RGS1Q08116 209 aa17.14■□□□□ 0.33
COMMD4-208ENST00000563220 SLC9A5Q14940 896 aa17.14■□□□□ 0.33
COMMD4-208ENST00000563220 GLYATQ6IB77 296 aa17.14■□□□□ 0.33
COMMD4-208ENST00000563220 ZFP1Q6P2D0 407 aa17.14■□□□□ 0.33
COMMD4-208ENST00000563220 RNF44Q7L0R7 432 aa17.14■□□□□ 0.33
COMMD4-208ENST00000563220 CLEC4FQ8N1N0 589 aa17.14■□□□□ 0.33
COMMD4-208ENST00000563220 DTWD1Q8N5C7 304 aa17.14■□□□□ 0.33
COMMD4-208ENST00000563220 OR2T12Q8NG77 320 aa17.14■□□□□ 0.33
COMMD4-208ENST00000563220 OR4A15Q8NGL6 344 aa17.14■□□□□ 0.33
COMMD4-208ENST00000563220 GOT1L1Q8NHS2 421 aaPredicted RBP17.14■□□□□ 0.33
COMMD4-208ENST00000563220 UTP15Q8TED0 518 aaKnown RBP17.14■□□□□ 0.33
COMMD4-208ENST00000563220 SLCO4A1Q96BD0 722 aa17.14■□□□□ 0.33
COMMD4-208ENST00000563220 MUC13Q9H3R2 512 aa17.14■□□□□ 0.33
COMMD4-208ENST00000563220 SEMA6CQ9H3T2 930 aa17.14■□□□□ 0.33
COMMD4-208ENST00000563220 FAM60AQ9NP50 221 aa17.14■□□□□ 0.33
COMMD4-208ENST00000563220 AQP12BA6NM10 295 aa17.14■□□□□ 0.33
COMMD4-208ENST00000563220 WASHC1A8K0Z3 465 aa17.14■□□□□ 0.33
COMMD4-208ENST00000563220 HCRTR1O43613 425 aa17.14■□□□□ 0.33
COMMD4-208ENST00000563220 ABCB1P08183 1280 aaPredicted RBP17.14■□□□□ 0.33
COMMD4-208ENST00000563220 ZCCHC18P0CG32 403 aa17.14■□□□□ 0.33
COMMD4-208ENST00000563220 ZNF888P0CJ79 500 aaPredicted RBP17.14■□□□□ 0.33
COMMD4-208ENST00000563220 SMIM10L1P0DMW3 83 aa17.14■□□□□ 0.33
COMMD4-208ENST00000563220 CERS1P27544 350 aa17.14■□□□□ 0.33
COMMD4-208ENST00000563220 GSTM5P46439 218 aa17.14■□□□□ 0.33
COMMD4-208ENST00000563220 CAPZBP47756 277 aa17.14■□□□□ 0.33
COMMD4-208ENST00000563220 RXRGP48443 463 aa17.14■□□□□ 0.33
COMMD4-208ENST00000563220 BTN3A2P78410 334 aa17.14■□□□□ 0.33
COMMD4-208ENST00000563220 GAB1Q13480 694 aa17.14■□□□□ 0.33
COMMD4-208ENST00000563220 BLMHQ13867 455 aa17.14■□□□□ 0.33
COMMD4-208ENST00000563220 KLHL35Q6PF15 583 aa17.14■□□□□ 0.33
COMMD4-208ENST00000563220 C11orf74Q86VG3 221 aa17.14■□□□□ 0.33
COMMD4-208ENST00000563220 AQP12AQ8IXF9 295 aa17.14■□□□□ 0.33
COMMD4-208ENST00000563220 ZCCHC7Q8N3Z6 543 aaKnown RBP17.14■□□□□ 0.33
COMMD4-208ENST00000563220 DNAJC9Q8WXX5 260 aa17.14■□□□□ 0.33
COMMD4-208ENST00000563220 GAL3ST3Q96A11 431 aa17.14■□□□□ 0.33
COMMD4-208ENST00000563220 DUS3LQ96G46 650 aaKnown RBP17.14■□□□□ 0.33
COMMD4-208ENST00000563220 SMIM10Q96HG1 83 aa17.14■□□□□ 0.33
COMMD4-208ENST00000563220 TRAPPC9Q96Q05 1148 aa17.14■□□□□ 0.33
COMMD4-208ENST00000563220 RPF2Q9H7B2 306 aaKnown RBP17.14■□□□□ 0.33
COMMD4-208ENST00000563220 AP3M1Q9Y2T2 418 aa17.14■□□□□ 0.33
COMMD4-208ENST00000563220 CSNK1G3Q9Y6M4 447 aa17.14■□□□□ 0.33
COMMD4-208ENST00000563220 RNF215Q9Y6U7 377 aa17.14■□□□□ 0.33
COMMD4-208ENST00000563220 MDC1Q14676 2089 aaKnown RBP17.14■□□□□ 0.33
COMMD4-208ENST00000563220 ZDBF2Q9HCK1 2354 aa17.13■□□□□ 0.33
COMMD4-208ENST00000563220 A0A1W2PRB8 838 aa17.13■□□□□ 0.33
COMMD4-208ENST00000563220 EPN2O95208 641 aa17.13■□□□□ 0.33
COMMD4-208ENST00000563220 SLC35G6P0C7Q6 338 aa17.13■□□□□ 0.33
COMMD4-208ENST00000563220 CDH3P22223 829 aa17.13■□□□□ 0.33
COMMD4-208ENST00000563220 TSFMP43897 325 aaKnown RBP17.13■□□□□ 0.33
COMMD4-208ENST00000563220 LRRC74AQ0VAA2 488 aa17.13■□□□□ 0.33
COMMD4-208ENST00000563220 COL9A2Q14055 689 aaPredicted RBP17.13■□□□□ 0.33
COMMD4-208ENST00000563220 C6orf132Q5T0Z8 1188 aa17.13■□□□□ 0.33
COMMD4-208ENST00000563220 NDUFAF5Q5TEU4 345 aa17.13■□□□□ 0.33
COMMD4-208ENST00000563220 IRGCQ6NXR0 463 aa17.13■□□□□ 0.33
COMMD4-208ENST00000563220 LRRC74BQ6ZQY2 392 aa17.13■□□□□ 0.33
COMMD4-208ENST00000563220 GPR155Q7Z3F1 870 aa17.13■□□□□ 0.33
COMMD4-208ENST00000563220 DTWD2Q8NBA8 298 aa17.13■□□□□ 0.33
COMMD4-208ENST00000563220 CANT1Q8WVQ1 401 aa17.13■□□□□ 0.33
COMMD4-208ENST00000563220 PIGKQ92643 395 aa17.13■□□□□ 0.33
COMMD4-208ENST00000563220 MAP3K3Q99759 626 aa17.13■□□□□ 0.33
COMMD4-208ENST00000563220 TRIM4Q9C037 500 aa17.13■□□□□ 0.33
COMMD4-208ENST00000563220 TPT1P8Q9HAU6 139 aa17.13■□□□□ 0.33
COMMD4-208ENST00000563220 SLAMF7Q9NQ25 335 aa17.13■□□□□ 0.33
COMMD4-208ENST00000563220 FSCN3Q9NQT6 498 aa17.13■□□□□ 0.33
COMMD4-208ENST00000563220 FBXW2Q9UKT8 454 aa17.13■□□□□ 0.33
COMMD4-208ENST00000563220 ATG4BQ9Y4P1 393 aa17.13■□□□□ 0.33
COMMD4-208ENST00000563220 LAMA1P25391 3075 aa17.13■□□□□ 0.33
COMMD4-208ENST00000563220 A0A1W2PR48 441 aa17.12■□□□□ 0.33
COMMD4-208ENST00000563220 TCRBV5S2A0A599 114 aa17.12■□□□□ 0.33
COMMD4-208ENST00000563220 PRKRAO75569 313 aaKnown RBP17.12■□□□□ 0.33
COMMD4-208ENST00000563220 EIF2S1P05198 315 aaKnown RBP17.12■□□□□ 0.33
COMMD4-208ENST00000563220 GPX2P18283 190 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms