RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 RASAL1O95294 804 aa16.11■□□□□ 0.17
CDC42BPB-208ENST00000561271 RAB38P57729 211 aa16.11■□□□□ 0.17
CDC42BPB-208ENST00000561271 KCNK10P57789 538 aa16.11■□□□□ 0.17
CDC42BPB-208ENST00000561271 IRF8Q02556 426 aa16.11■□□□□ 0.17
CDC42BPB-208ENST00000561271 ADPRMQ3LIE5 342 aa16.11■□□□□ 0.17
CDC42BPB-208ENST00000561271 MDS2Q8NDY4 140 aa16.11■□□□□ 0.17
CDC42BPB-208ENST00000561271 TMEM52Q8NDY8 209 aa16.11■□□□□ 0.17
CDC42BPB-208ENST00000561271 ELP5Q8TE02 316 aa16.11■□□□□ 0.17
CDC42BPB-208ENST00000561271 SEC16BQ96JE7 1060 aa16.11■□□□□ 0.17
CDC42BPB-208ENST00000561271 CSF3RQ99062 836 aa16.11■□□□□ 0.17
CDC42BPB-208ENST00000561271 UTP23Q9BRU9 249 aaKnown RBP16.11■□□□□ 0.17
CDC42BPB-208ENST00000561271 REXO4Q9GZR2 422 aaKnown RBP16.11■□□□□ 0.17
CDC42BPB-208ENST00000561271 COPS7BQ9H9Q2 264 aaPredicted RBP16.11■□□□□ 0.17
CDC42BPB-208ENST00000561271 KLHL1Q9NR64 748 aa16.11■□□□□ 0.17
CDC42BPB-208ENST00000561271 ACOT9Q9Y305 439 aa16.11■□□□□ 0.17
CDC42BPB-208ENST00000561271 NCKAP5O14513 1909 aa16.11■□□□□ 0.17
CDC42BPB-208ENST00000561271 ITPR2Q14571 2701 aa16.1■□□□□ 0.17
CDC42BPB-208ENST00000561271 A0A088AWK7 358 aa16.1■□□□□ 0.17
CDC42BPB-208ENST00000561271 C2P06681 752 aa16.1■□□□□ 0.17
CDC42BPB-208ENST00000561271 ZNF10P21506 573 aaPredicted RBP16.1■□□□□ 0.17
CDC42BPB-208ENST00000561271 MST1P26927 711 aa16.1■□□□□ 0.17
CDC42BPB-208ENST00000561271 PPP2R1BP30154 601 aa16.1■□□□□ 0.17
CDC42BPB-208ENST00000561271 MSH2P43246 934 aa16.1■□□□□ 0.17
CDC42BPB-208ENST00000561271 OR1C1Q15619 314 aa16.1■□□□□ 0.17
CDC42BPB-208ENST00000561271 C4orf17Q53FE4 359 aa16.1■□□□□ 0.17
CDC42BPB-208ENST00000561271 PAGE2BQ5JRK9 111 aa16.1■□□□□ 0.17
CDC42BPB-208ENST00000561271 ABHD17CQ6PCB6 329 aa16.1■□□□□ 0.17
CDC42BPB-208ENST00000561271 SCUBE1Q8IWY4 988 aa16.1■□□□□ 0.17
CDC42BPB-208ENST00000561271 ARMC2Q8NEN0 867 aa16.1■□□□□ 0.17
CDC42BPB-208ENST00000561271 F2RL3Q96RI0 385 aa16.1■□□□□ 0.17
CDC42BPB-208ENST00000561271 NPLQ9BXD5 320 aaPredicted RBP16.1■□□□□ 0.17
CDC42BPB-208ENST00000561271 CDC42EP4Q9H3Q1 356 aaKnown RBP16.1■□□□□ 0.17
CDC42BPB-208ENST00000561271 CDCP1Q9H5V8 836 aa16.1■□□□□ 0.17
CDC42BPB-208ENST00000561271 ACSS3Q9H6R3 686 aa16.1■□□□□ 0.17
CDC42BPB-208ENST00000561271 PRM3Q9NNZ6 103 aa16.1■□□□□ 0.17
CDC42BPB-208ENST00000561271 PRTFDC1Q9NRG1 225 aa16.1■□□□□ 0.17
CDC42BPB-208ENST00000561271 OPTCQ9UBM4 332 aa16.1■□□□□ 0.17
CDC42BPB-208ENST00000561271 MTRF1LQ9UGC7 380 aaKnown RBP16.1■□□□□ 0.17
CDC42BPB-208ENST00000561271 DMGDHQ9UI17 866 aaKnown RBP16.1■□□□□ 0.17
CDC42BPB-208ENST00000561271 MMACHCQ9Y4U1 282 aa16.1■□□□□ 0.17
CDC42BPB-208ENST00000561271 NINQ8N4C6 2090 aa16.09■□□□□ 0.17
CDC42BPB-208ENST00000561271 A0A087X1B8 175 aa16.09■□□□□ 0.17
CDC42BPB-208ENST00000561271 WIPF3A6NGB9 483 aa16.09■□□□□ 0.17
CDC42BPB-208ENST00000561271 K7EPI3 171 aa16.09■□□□□ 0.17
CDC42BPB-208ENST00000561271 LRRTM2O43300 516 aa16.09■□□□□ 0.17
CDC42BPB-208ENST00000561271 SH3BGRLO75368 114 aa16.09■□□□□ 0.17
CDC42BPB-208ENST00000561271 MYO1DO94832 1006 aa16.09■□□□□ 0.17
CDC42BPB-208ENST00000561271 ACSL3O95573 720 aa16.09■□□□□ 0.17
CDC42BPB-208ENST00000561271 CLDN1O95832 211 aa16.09■□□□□ 0.17
CDC42BPB-208ENST00000561271 PCNAP12004 261 aa16.09■□□□□ 0.17
CDC42BPB-208ENST00000561271 MTHFD2P13995 350 aa16.09■□□□□ 0.17
CDC42BPB-208ENST00000561271 PHBP35232 272 aa16.09■□□□□ 0.17
CDC42BPB-208ENST00000561271 CD96P40200 585 aa16.09■□□□□ 0.17
CDC42BPB-208ENST00000561271 SERPINB8P50452 374 aa16.09■□□□□ 0.17
CDC42BPB-208ENST00000561271 MTTPP55157 894 aa16.09■□□□□ 0.17
CDC42BPB-208ENST00000561271 OC90Q02509 493 aaPredicted RBP16.09■□□□□ 0.17
CDC42BPB-208ENST00000561271 SLC13A2Q13183 592 aa16.09■□□□□ 0.17
CDC42BPB-208ENST00000561271 LAPTM5Q13571 262 aa16.09■□□□□ 0.17
CDC42BPB-208ENST00000561271 TBCCQ15814 346 aa16.09■□□□□ 0.17
CDC42BPB-208ENST00000561271 ZNF468Q5VIY5 522 aaPredicted RBP16.09■□□□□ 0.17
CDC42BPB-208ENST00000561271 SPINK14Q6IE38 97 aa16.09■□□□□ 0.17
CDC42BPB-208ENST00000561271 GFRALQ6UXV0 394 aa16.09■□□□□ 0.17
CDC42BPB-208ENST00000561271 CLNKQ7Z7G1 428 aa16.09■□□□□ 0.17
CDC42BPB-208ENST00000561271 LGI4Q8N135 537 aa16.09■□□□□ 0.17
CDC42BPB-208ENST00000561271 MMGT1Q8N4V1 131 aa16.09■□□□□ 0.17
CDC42BPB-208ENST00000561271 NFAM1Q8NET5 270 aaPredicted RBP16.09■□□□□ 0.17
CDC42BPB-208ENST00000561271 SERINC2Q96SA4 455 aa16.09■□□□□ 0.17
CDC42BPB-208ENST00000561271 MS4A8Q9BY19 250 aa16.09■□□□□ 0.17
CDC42BPB-208ENST00000561271 CLDN16Q9Y5I7 305 aa16.09■□□□□ 0.17
CDC42BPB-208ENST00000561271 TEX15Q9BXT5 2789 aa16.08■□□□□ 0.16
CDC42BPB-208ENST00000561271 A0A096LPK6 155 aa16.08■□□□□ 0.16
CDC42BPB-208ENST00000561271 RTCAO00442 366 aaKnown RBP16.08■□□□□ 0.16
CDC42BPB-208ENST00000561271 UNC5CO95185 931 aa16.08■□□□□ 0.16
CDC42BPB-208ENST00000561271 CRYABP02511 175 aaKnown RBP16.08■□□□□ 0.16
CDC42BPB-208ENST00000561271 ALDOAP04075 364 aaKnown RBP16.08■□□□□ 0.16
CDC42BPB-208ENST00000561271 MYBL2P10244 700 aa16.08■□□□□ 0.16
CDC42BPB-208ENST00000561271 TPP2P29144 1249 aaPredicted RBP16.08■□□□□ 0.16
CDC42BPB-208ENST00000561271 HPDP32754 393 aaPredicted RBP16.08■□□□□ 0.16
CDC42BPB-208ENST00000561271 LIM2P55344 173 aa16.08■□□□□ 0.16
CDC42BPB-208ENST00000561271 E2F2Q14209 437 aa16.08■□□□□ 0.16
CDC42BPB-208ENST00000561271 HIST2H2ACQ16777 129 aaPredicted RBP16.08■□□□□ 0.16
CDC42BPB-208ENST00000561271 C1QL3Q5VWW1 255 aa16.08■□□□□ 0.16
CDC42BPB-208ENST00000561271 HIST2H2AA3Q6FI13 130 aa16.08■□□□□ 0.16
CDC42BPB-208ENST00000561271 ZNF793Q6ZN11 406 aa16.08■□□□□ 0.16
CDC42BPB-208ENST00000561271 RPS19BP1Q86WX3 136 aaKnown RBP16.08■□□□□ 0.16
CDC42BPB-208ENST00000561271 RNF175Q8N4F7 328 aa16.08■□□□□ 0.16
CDC42BPB-208ENST00000561271 ADAMTS18Q8TE60 1221 aa16.08■□□□□ 0.16
CDC42BPB-208ENST00000561271 ZNF473Q8WTR7 871 aaKnown RBP16.08■□□□□ 0.16
CDC42BPB-208ENST00000561271 PNO1Q9NRX1 252 aaKnown RBP16.08■□□□□ 0.16
CDC42BPB-208ENST00000561271 DAPP1Q9UN19 280 aa16.08■□□□□ 0.16
CDC42BPB-208ENST00000561271 MRPS33Q9Y291 106 aaKnown RBP16.08■□□□□ 0.16
CDC42BPB-208ENST00000561271 NOTCH2Q04721 2471 aa16.08■□□□□ 0.16
CDC42BPB-208ENST00000561271 TRBV11-1A0A0K0K1C0 115 aa16.07■□□□□ 0.16
CDC42BPB-208ENST00000561271 LRRC14BA6NHZ5 514 aa16.07■□□□□ 0.16
CDC42BPB-208ENST00000561271 SYCE1LA8MT33 242 aa16.07■□□□□ 0.16
CDC42BPB-208ENST00000561271 NEURL1O76050 574 aa16.07■□□□□ 0.16
CDC42BPB-208ENST00000561271 GFAPP14136 432 aa16.07■□□□□ 0.16
CDC42BPB-208ENST00000561271 CD46P15529 392 aa16.07■□□□□ 0.16
CDC42BPB-208ENST00000561271 ECHS1P30084 290 aa16.07■□□□□ 0.16
CDC42BPB-208ENST00000561271 CASP2P42575 452 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms