RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 RPS13P62277 151 aaKnown RBP14.36□□□□□ -0.11
SNRPA1-213ENST00000560856 CLCQ05315 142 aa14.36□□□□□ -0.11
SNRPA1-213ENST00000560856 DDX39BQ13838 428 aaKnown RBP14.36□□□□□ -0.11
SNRPA1-213ENST00000560856 ABRAXAS2Q15018 415 aa14.36□□□□□ -0.11
SNRPA1-213ENST00000560856 MFSD4BQ5TF39 518 aa14.36□□□□□ -0.11
SNRPA1-213ENST00000560856 VWA5B1Q5TIE3 1220 aa14.36□□□□□ -0.11
SNRPA1-213ENST00000560856 LETMD1Q6P1Q0 360 aa14.36□□□□□ -0.11
SNRPA1-213ENST00000560856 QSOX2Q6ZRP7 698 aa14.36□□□□□ -0.11
SNRPA1-213ENST00000560856 CHSY3Q70JA7 882 aa14.36□□□□□ -0.11
SNRPA1-213ENST00000560856 TRABD2AQ86V40 505 aa14.36□□□□□ -0.11
SNRPA1-213ENST00000560856 MYLK4Q86YV6 388 aaPredicted RBP14.36□□□□□ -0.11
SNRPA1-213ENST00000560856 RIBC1Q8N443 379 aaPredicted RBP14.36□□□□□ -0.11
SNRPA1-213ENST00000560856 SRFBP1Q8NEF9 429 aaKnown RBP14.36□□□□□ -0.11
SNRPA1-213ENST00000560856 OR4F6Q8NGB9 312 aa14.36□□□□□ -0.11
SNRPA1-213ENST00000560856 METTL21AQ8WXB1 218 aa14.36□□□□□ -0.11
SNRPA1-213ENST00000560856 L3HYPDHQ96EM0 354 aa14.36□□□□□ -0.11
SNRPA1-213ENST00000560856 FAR2Q96K12 515 aa14.36□□□□□ -0.11
SNRPA1-213ENST00000560856 KCNC2Q96PR1 638 aa14.36□□□□□ -0.11
SNRPA1-213ENST00000560856 TBCDQ9BTW9 1192 aa14.36□□□□□ -0.11
SNRPA1-213ENST00000560856 ZNF717Q9BY31 904 aaPredicted RBP14.36□□□□□ -0.11
SNRPA1-213ENST00000560856 LHPPQ9H008 270 aa14.36□□□□□ -0.11
SNRPA1-213ENST00000560856 ZBTB20Q9HC78 741 aaPredicted RBP14.36□□□□□ -0.11
SNRPA1-213ENST00000560856 C5AR2Q9P296 337 aa14.36□□□□□ -0.11
SNRPA1-213ENST00000560856 DAPP1Q9UN19 280 aa14.36□□□□□ -0.11
SNRPA1-213ENST00000560856 ZNF451Q9Y4E5 1061 aa14.36□□□□□ -0.11
SNRPA1-213ENST00000560856 HELZ2Q9BYK8 2649 aaKnown RBP14.36□□□□□ -0.11
SNRPA1-213ENST00000560856 TGFBR3LH3BV60 316 aa14.35□□□□□ -0.11
SNRPA1-213ENST00000560856 PLPP1O14494 284 aa14.35□□□□□ -0.11
SNRPA1-213ENST00000560856 B3GALT2O43825 422 aa14.35□□□□□ -0.11
SNRPA1-213ENST00000560856 PRR35P0CG20 571 aa14.35□□□□□ -0.11
SNRPA1-213ENST00000560856 KRT4P19013 534 aa14.35□□□□□ -0.11
SNRPA1-213ENST00000560856 HIST1H1TP22492 207 aaPredicted RBP14.35□□□□□ -0.11
SNRPA1-213ENST00000560856 JAK1P23458 1154 aa14.35□□□□□ -0.11
SNRPA1-213ENST00000560856 ITGA3P26006 1051 aa14.35□□□□□ -0.11
SNRPA1-213ENST00000560856 CCT5P48643 541 aa14.35□□□□□ -0.11
SNRPA1-213ENST00000560856 CD97P48960 835 aa14.35□□□□□ -0.11
SNRPA1-213ENST00000560856 RAB38P57729 211 aa14.35□□□□□ -0.11
SNRPA1-213ENST00000560856 TGM3Q08188 693 aa14.35□□□□□ -0.11
SNRPA1-213ENST00000560856 KLRB1Q12918 225 aa14.35□□□□□ -0.11
SNRPA1-213ENST00000560856 NSDHLQ15738 373 aa14.35□□□□□ -0.11
SNRPA1-213ENST00000560856 IGFL2Q6UWQ7 119 aa14.35□□□□□ -0.11
SNRPA1-213ENST00000560856 IGFL3Q6UXB1 125 aa14.35□□□□□ -0.11
SNRPA1-213ENST00000560856 ZYG11AQ6WRX3 759 aa14.35□□□□□ -0.11
SNRPA1-213ENST00000560856 MILR1Q7Z6M3 343 aa14.35□□□□□ -0.11
SNRPA1-213ENST00000560856 SLC22A9Q8IVM8 553 aa14.35□□□□□ -0.11
SNRPA1-213ENST00000560856 C4orf33Q8N1A6 199 aa14.35□□□□□ -0.11
SNRPA1-213ENST00000560856 RBMXL3Q8N7X1 1067 aaKnown RBP14.35□□□□□ -0.11
SNRPA1-213ENST00000560856 ACOT4Q8N9L9 421 aa14.35□□□□□ -0.11
SNRPA1-213ENST00000560856 TRPC4APQ8TEL6 797 aa14.35□□□□□ -0.11
SNRPA1-213ENST00000560856 ATP6V1E2Q96A05 226 aa14.35□□□□□ -0.11
SNRPA1-213ENST00000560856 REPS1Q96D71 796 aa14.35□□□□□ -0.11
SNRPA1-213ENST00000560856 THOC3Q96J01 351 aaKnown RBP14.35□□□□□ -0.11
SNRPA1-213ENST00000560856 CSF3RQ99062 836 aa14.35□□□□□ -0.11
SNRPA1-213ENST00000560856 TUBB6Q9BUF5 446 aa14.35□□□□□ -0.11
SNRPA1-213ENST00000560856 SORBS1Q9BX66 1292 aaKnown RBP14.35□□□□□ -0.11
SNRPA1-213ENST00000560856 NECTIN3Q9NQS3 549 aa14.35□□□□□ -0.11
SNRPA1-213ENST00000560856 RIC8BQ9NVN3 520 aa14.35□□□□□ -0.11
SNRPA1-213ENST00000560856 MKS1Q9NXB0 559 aa14.35□□□□□ -0.11
SNRPA1-213ENST00000560856 ANAPC2Q9UJX6 822 aa14.35□□□□□ -0.11
SNRPA1-213ENST00000560856 GRID1Q9ULK0 1009 aa14.35□□□□□ -0.11
SNRPA1-213ENST00000560856 PLAAQ9Y263 795 aa14.35□□□□□ -0.11
SNRPA1-213ENST00000560856 A0A088AWK7 358 aa14.34□□□□□ -0.11
SNRPA1-213ENST00000560856 TCRBV16S1A1N1A0A5B0 115 aa14.34□□□□□ -0.11
SNRPA1-213ENST00000560856 SAP18O00422 153 aaKnown RBP14.34□□□□□ -0.11
SNRPA1-213ENST00000560856 PRMT3O60678 531 aa14.34□□□□□ -0.11
SNRPA1-213ENST00000560856 SEC24DO94855 1032 aaPredicted RBP14.34□□□□□ -0.11
SNRPA1-213ENST00000560856 SUPT7LO94864 414 aa14.34□□□□□ -0.11
SNRPA1-213ENST00000560856 OTCP00480 354 aa14.34□□□□□ -0.11
SNRPA1-213ENST00000560856 SERPINA7P05543 415 aa14.34□□□□□ -0.11
SNRPA1-213ENST00000560856 TUBBP07437 444 aa14.34□□□□□ -0.11
SNRPA1-213ENST00000560856 MAOAP21397 527 aa14.34□□□□□ -0.11
SNRPA1-213ENST00000560856 ZNF10P21506 573 aaPredicted RBP14.34□□□□□ -0.11
SNRPA1-213ENST00000560856 PTX3P26022 381 aaPredicted RBP14.34□□□□□ -0.11
SNRPA1-213ENST00000560856 BSGP35613 385 aa14.34□□□□□ -0.11
SNRPA1-213ENST00000560856 ARFIP1P53367 373 aa14.34□□□□□ -0.11
SNRPA1-213ENST00000560856 CUL3Q13618 768 aa14.34□□□□□ -0.11
SNRPA1-213ENST00000560856 CCDC153Q494R4 210 aa14.34□□□□□ -0.11
SNRPA1-213ENST00000560856 SFT2D3Q587I9 215 aa14.34□□□□□ -0.11
SNRPA1-213ENST00000560856 COLEC12Q5KU26 742 aa14.34□□□□□ -0.11
SNRPA1-213ENST00000560856 FRG2Q64ET8 278 aa14.34□□□□□ -0.11
SNRPA1-213ENST00000560856 OR4C11Q6IEV9 310 aa14.34□□□□□ -0.11
SNRPA1-213ENST00000560856 SCUBE1Q8IWY4 988 aa14.34□□□□□ -0.11
SNRPA1-213ENST00000560856 KBTBD2Q8IY47 623 aa14.34□□□□□ -0.11
SNRPA1-213ENST00000560856 IQCKQ8N0W5 287 aa14.34□□□□□ -0.11
SNRPA1-213ENST00000560856 BANPQ8N9N5 519 aa14.34□□□□□ -0.11
SNRPA1-213ENST00000560856 MYRIPQ8NFW9 859 aa14.34□□□□□ -0.11
SNRPA1-213ENST00000560856 RGMAQ96B86 450 aa14.34□□□□□ -0.11
SNRPA1-213ENST00000560856 PTCHD1Q96NR3 888 aa14.34□□□□□ -0.11
SNRPA1-213ENST00000560856 FRG2BQ96QU4 278 aa14.34□□□□□ -0.11
SNRPA1-213ENST00000560856 ZNF382Q96SR6 550 aa14.34□□□□□ -0.11
SNRPA1-213ENST00000560856 MAPKAP1Q9BPZ7 522 aa14.34□□□□□ -0.11
SNRPA1-213ENST00000560856 ROGDIQ9GZN7 287 aa14.34□□□□□ -0.11
SNRPA1-213ENST00000560856 GSTO2Q9H4Y5 243 aa14.34□□□□□ -0.11
SNRPA1-213ENST00000560856 LYRM4Q9HD34 91 aa14.34□□□□□ -0.11
SNRPA1-213ENST00000560856 PRDM9Q9NQV7 894 aa14.34□□□□□ -0.11
SNRPA1-213ENST00000560856 C19orf25Q9UFG5 118 aaPredicted RBP14.34□□□□□ -0.11
SNRPA1-213ENST00000560856 TRPS1Q9UHF7 1281 aa14.34□□□□□ -0.11
SNRPA1-213ENST00000560856 MMACHCQ9Y4U1 282 aa14.34□□□□□ -0.11
SNRPA1-213ENST00000560856 PSMD12O00232 456 aaPredicted RBP14.33□□□□□ -0.12
SNRPA1-213ENST00000560856 COPEO14579 308 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms