RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 SMAD7O15105 426 aaKnown RBP11.86□□□□□ -0.51
RABGGTA-213ENST00000560127 NDUFS4O43181 175 aa11.86□□□□□ -0.51
RABGGTA-213ENST00000560127 ARHGEF9O43307 516 aa11.86□□□□□ -0.51
RABGGTA-213ENST00000560127 ATP6AP2O75787 350 aa11.86□□□□□ -0.51
RABGGTA-213ENST00000560127 ZNF888P0CJ79 500 aaPredicted RBP11.86□□□□□ -0.51
RABGGTA-213ENST00000560127 GABRA1P14867 456 aa11.86□□□□□ -0.51
RABGGTA-213ENST00000560127 CNR1P21554 472 aa11.86□□□□□ -0.51
RABGGTA-213ENST00000560127 CETN2P41208 172 aa11.86□□□□□ -0.51
RABGGTA-213ENST00000560127 SOX3P41225 446 aa11.86□□□□□ -0.51
RABGGTA-213ENST00000560127 SESN2P58004 480 aaPredicted RBP11.86□□□□□ -0.51
RABGGTA-213ENST00000560127 PPP2R2BQ00005 443 aa11.86□□□□□ -0.51
RABGGTA-213ENST00000560127 FOXO1Q12778 655 aa11.86□□□□□ -0.51
RABGGTA-213ENST00000560127 CUL1Q13616 776 aa11.86□□□□□ -0.51
RABGGTA-213ENST00000560127 HSPB2Q16082 182 aa11.86□□□□□ -0.51
RABGGTA-213ENST00000560127 HYAL4Q2M3T9 481 aa11.86□□□□□ -0.51
RABGGTA-213ENST00000560127 ZNF750Q32MQ0 723 aa11.86□□□□□ -0.51
RABGGTA-213ENST00000560127 RNF187Q5TA31 235 aaPredicted RBP11.86□□□□□ -0.51
RABGGTA-213ENST00000560127 POMZP3Q6PJE2 187 aa11.86□□□□□ -0.51
RABGGTA-213ENST00000560127 CYHR1Q6ZMK1 362 aa11.86□□□□□ -0.51
RABGGTA-213ENST00000560127 GK5Q6ZS86 529 aa11.86□□□□□ -0.51
RABGGTA-213ENST00000560127 PRELID2Q8N945 189 aa11.86□□□□□ -0.51
RABGGTA-213ENST00000560127 SIMC1Q8NDZ2 872 aa11.86□□□□□ -0.51
RABGGTA-213ENST00000560127 NCLNQ969V3 563 aa11.86□□□□□ -0.51
RABGGTA-213ENST00000560127 LRRC46Q96FV0 321 aa11.86□□□□□ -0.51
RABGGTA-213ENST00000560127 FAM173AQ9BQD7 235 aa11.86□□□□□ -0.51
RABGGTA-213ENST00000560127 LDAHQ9H6V9 325 aa11.86□□□□□ -0.51
RABGGTA-213ENST00000560127 PYCARDQ9ULZ3 195 aa11.86□□□□□ -0.51
RABGGTA-213ENST00000560127 VPS9D1Q9Y2B5 631 aa11.86□□□□□ -0.51
RABGGTA-213ENST00000560127 E5RI56 91 aa11.85□□□□□ -0.51
RABGGTA-213ENST00000560127 ZBTB14O43829 449 aa11.85□□□□□ -0.51
RABGGTA-213ENST00000560127 CEP104O60308 925 aa11.85□□□□□ -0.51
RABGGTA-213ENST00000560127 ZFAND5O76080 213 aa11.85□□□□□ -0.51
RABGGTA-213ENST00000560127 VAPBO95292 243 aa11.85□□□□□ -0.51
RABGGTA-213ENST00000560127 HRGP04196 525 aa11.85□□□□□ -0.51
RABGGTA-213ENST00000560127 MPC1LP0DKB6 136 aa11.85□□□□□ -0.51
RABGGTA-213ENST00000560127 CDH1P12830 882 aa11.85□□□□□ -0.51
RABGGTA-213ENST00000560127 PPP2R1BP30154 601 aa11.85□□□□□ -0.51
RABGGTA-213ENST00000560127 SKP1P63208 163 aa11.85□□□□□ -0.51
RABGGTA-213ENST00000560127 SLC10A1Q14973 349 aa11.85□□□□□ -0.51
RABGGTA-213ENST00000560127 POU4F3Q15319 338 aa11.85□□□□□ -0.51
RABGGTA-213ENST00000560127 TERF2Q15554 542 aa11.85□□□□□ -0.51
RABGGTA-213ENST00000560127 KCTD19Q17RG1 926 aaPredicted RBP11.85□□□□□ -0.51
RABGGTA-213ENST00000560127 MRNIPQ6NTE8 343 aa11.85□□□□□ -0.51
RABGGTA-213ENST00000560127 CES3Q6UWW8 571 aa11.85□□□□□ -0.51
RABGGTA-213ENST00000560127 SDCCAG8Q86SQ7 713 aaPredicted RBP11.85□□□□□ -0.51
RABGGTA-213ENST00000560127 PRUNE1Q86TP1 453 aa11.85□□□□□ -0.51
RABGGTA-213ENST00000560127 C17orf64Q86WR6 236 aa11.85□□□□□ -0.51
RABGGTA-213ENST00000560127 ULK2Q8IYT8 1036 aa11.85□□□□□ -0.51
RABGGTA-213ENST00000560127 UBL4BQ8N7F7 174 aa11.85□□□□□ -0.51
RABGGTA-213ENST00000560127 TNIP2Q8NFZ5 429 aa11.85□□□□□ -0.51
RABGGTA-213ENST00000560127 MFSD3Q96ES6 412 aa11.85□□□□□ -0.51
RABGGTA-213ENST00000560127 RASL10BQ96S79 203 aa11.85□□□□□ -0.51
RABGGTA-213ENST00000560127 TCF12Q99081 682 aa11.85□□□□□ -0.51
RABGGTA-213ENST00000560127 AARSD1Q9BTE6 412 aaKnown RBP11.85□□□□□ -0.51
RABGGTA-213ENST00000560127 PCBD2Q9H0N5 130 aa11.85□□□□□ -0.51
RABGGTA-213ENST00000560127 SEMA4BQ9NPR2 832 aaPredicted RBP11.85□□□□□ -0.51
RABGGTA-213ENST00000560127 FOXD3Q9UJU5 478 aaPredicted RBP11.85□□□□□ -0.51
RABGGTA-213ENST00000560127 MED16Q9Y2X0 877 aa11.85□□□□□ -0.51
RABGGTA-213ENST00000560127 TRGV5A0A0B4J1U4 118 aa11.84□□□□□ -0.51
RABGGTA-213ENST00000560127 KDM4EB2RXH2 506 aaPredicted RBP11.84□□□□□ -0.51
RABGGTA-213ENST00000560127 HCN1O60741 890 aa11.84□□□□□ -0.51
RABGGTA-213ENST00000560127 PTMAP06454 111 aaKnown RBP11.84□□□□□ -0.51
RABGGTA-213ENST00000560127 APRTP07741 180 aa11.84□□□□□ -0.51
RABGGTA-213ENST00000560127 RNH1P13489 461 aaKnown RBP11.84□□□□□ -0.51
RABGGTA-213ENST00000560127 ETS1P14921 441 aa11.84□□□□□ -0.51
RABGGTA-213ENST00000560127 CEACAM8P31997 349 aaPredicted RBP11.84□□□□□ -0.51
RABGGTA-213ENST00000560127 GRK3P35626 688 aa11.84□□□□□ -0.51
RABGGTA-213ENST00000560127 DNASE1L1P49184 302 aa11.84□□□□□ -0.51
RABGGTA-213ENST00000560127 WNT3P56703 355 aa11.84□□□□□ -0.51
RABGGTA-213ENST00000560127 PWP1Q13610 501 aa11.84□□□□□ -0.51
RABGGTA-213ENST00000560127 OASLQ15646 514 aaKnown RBP11.84□□□□□ -0.51
RABGGTA-213ENST00000560127 NIPAL1Q6NVV3 410 aa11.84□□□□□ -0.51
RABGGTA-213ENST00000560127 UBE2R2Q712K3 238 aaPredicted RBP11.84□□□□□ -0.51
RABGGTA-213ENST00000560127 CENPUQ71F23 418 aa11.84□□□□□ -0.51
RABGGTA-213ENST00000560127 P3H2Q8IVL5 708 aa11.84□□□□□ -0.51
RABGGTA-213ENST00000560127 ARMC2Q8NEN0 867 aa11.84□□□□□ -0.51
RABGGTA-213ENST00000560127 UTP15Q8TED0 518 aaKnown RBP11.84□□□□□ -0.51
RABGGTA-213ENST00000560127 ZNF592Q92610 1267 aa11.84□□□□□ -0.51
RABGGTA-213ENST00000560127 KIAA1191Q96A73 305 aa11.84□□□□□ -0.51
RABGGTA-213ENST00000560127 SCYL1Q96KG9 808 aa11.84□□□□□ -0.51
RABGGTA-213ENST00000560127 CAPZA3Q96KX2 299 aa11.84□□□□□ -0.51
RABGGTA-213ENST00000560127 Q96MF0 132 aa11.84□□□□□ -0.51
RABGGTA-213ENST00000560127 CCDC77Q9BR77 488 aa11.84□□□□□ -0.51
RABGGTA-213ENST00000560127 RHBGQ9H310 441 aa11.84□□□□□ -0.51
RABGGTA-213ENST00000560127 EXO5Q9H790 373 aa11.84□□□□□ -0.51
RABGGTA-213ENST00000560127 RAB6BQ9NRW1 208 aa11.84□□□□□ -0.51
RABGGTA-213ENST00000560127 PNO1Q9NRX1 252 aaKnown RBP11.84□□□□□ -0.51
RABGGTA-213ENST00000560127 TUBA8Q9NY65 449 aaPredicted RBP11.84□□□□□ -0.51
RABGGTA-213ENST00000560127 MYOTQ9UBF9 498 aa11.84□□□□□ -0.51
RABGGTA-213ENST00000560127 MTRF1LQ9UGC7 380 aaKnown RBP11.84□□□□□ -0.51
RABGGTA-213ENST00000560127 TRPS1Q9UHF7 1281 aa11.84□□□□□ -0.51
RABGGTA-213ENST00000560127 CLDN16Q9Y5I7 305 aa11.84□□□□□ -0.51
RABGGTA-213ENST00000560127 RAI1Q7Z5J4 1906 aaPredicted RBP11.84□□□□□ -0.51
RABGGTA-213ENST00000560127 TGFBR3LH3BV60 316 aa11.83□□□□□ -0.52
RABGGTA-213ENST00000560127 PSMD12O00232 456 aaPredicted RBP11.83□□□□□ -0.52
RABGGTA-213ENST00000560127 WWP2O00308 870 aa11.83□□□□□ -0.52
RABGGTA-213ENST00000560127 OR1F1O43749 312 aa11.83□□□□□ -0.52
RABGGTA-213ENST00000560127 ZNF354AO60765 605 aaPredicted RBP11.83□□□□□ -0.52
RABGGTA-213ENST00000560127 GOSR1O95249 250 aa11.83□□□□□ -0.52
RABGGTA-213ENST00000560127 IFNB1P01574 187 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms