RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 TAAR8Q969N4 342 aa13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 MTERF1Q99551 399 aaKnown RBP13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 TSSK6Q9BXA6 273 aa13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 SLC6A16Q9GZN6 736 aa13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 ZCCHC3Q9NUD5 404 aaKnown RBP13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 ARHGEF5Q12774 1597 aa13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 hCG_1807616A0A1W2PRN6 198 aa13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 MTMR11A4FU01 709 aa13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 CCL16O15467 120 aa13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 DGKGP49619 791 aa13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 NOMO1Q15155 1222 aa13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 ITPRIPL2Q3MIP1 535 aa13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 PLPP4Q5VZY2 271 aa13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 PAPD4Q6PIY7 484 aaKnown RBP13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 CREB3L2Q70SY1 520 aa13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 OR4D6Q8NGJ1 314 aa13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 RIOX1Q9H6W3 641 aa13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 PAK1IP1Q9NWT1 392 aaPredicted RBP13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 ZIM2Q9NZV7 527 aa13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 DISP2A7MBM2 1401 aa13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 GOLGA4Q13439 2230 aaKnown RBP13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 TRBC2A0A5B9 178 aa13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 ANKRD63C9JTQ0 380 aa13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 GPX6P59796 221 aa13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 CTC1Q2NKJ3 1217 aa13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 TMEM225Q6GV28 225 aa13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 ACER1Q8TDN7 264 aa13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 SLC35F5Q8WV83 523 aa13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 CHTF18Q8WVB6 975 aa13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 SPOCK2Q92563 424 aa13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 HINT2Q9BX68 163 aa13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 C1orf21Q9H246 121 aa13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 KLHL21Q9UJP4 597 aa13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 D6RAR5 112 aa13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 E7ESA3 106 aa13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 CDC7O00311 574 aa13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 PRKYO43930 277 aa13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 KLK3P07288 261 aaPredicted RBP13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 HOXA9P31269 272 aa13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 PTPRRQ15256 657 aa13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 PHF19Q5T6S3 580 aa13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 SLC35C1Q96A29 364 aa13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 CSPG4P5Q96PW8 444 aa13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 CPXM1Q96SM3 734 aa13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 ZNF442Q9H7R0 627 aa13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 ACSS2Q9NR19 701 aa13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 SOX1O00570 391 aaPredicted RBP13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 RGL2O15211 777 aa13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 PRKCGP05129 697 aa13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 PRKACBP22694 351 aa13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 RUNX2Q13950 521 aa13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 MELKQ14680 651 aa13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 CELF3Q5SZQ8 465 aaKnown RBP13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 GPC2Q8N158 579 aa13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 ZNF559Q9BR84 538 aa13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 SLC25A51Q9H1U9 297 aa13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 OR51E2Q9H255 320 aa13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 FBRSQ9HAH7 460 aa13.4□□□□□ -0.26
CSPG4P12-202ENST00000559989 SLC35F4A4IF30 521 aa13.39□□□□□ -0.27
CSPG4P12-202ENST00000559989 SNAPINO95295 136 aa13.39□□□□□ -0.27
CSPG4P12-202ENST00000559989 ZNF182P17025 639 aaPredicted RBP13.39□□□□□ -0.27
CSPG4P12-202ENST00000559989 CHRNA4P43681 627 aa13.39□□□□□ -0.27
CSPG4P12-202ENST00000559989 SEC13P55735 322 aa13.39□□□□□ -0.27
CSPG4P12-202ENST00000559989 TAS2R31P59538 309 aa13.39□□□□□ -0.27
CSPG4P12-202ENST00000559989 ACTBP60709 375 aa13.39□□□□□ -0.27
CSPG4P12-202ENST00000559989 ACTG1P63261 375 aa13.39□□□□□ -0.27
CSPG4P12-202ENST00000559989 AMZ1Q400G9 498 aa13.39□□□□□ -0.27
CSPG4P12-202ENST00000559989 FAM156AQ8NDB6 213 aa13.39□□□□□ -0.27
CSPG4P12-202ENST00000559989 OR6N2Q8NGY6 317 aa13.39□□□□□ -0.27
CSPG4P12-202ENST00000559989 LRRN4Q8WUT4 740 aa13.39□□□□□ -0.27
CSPG4P12-202ENST00000559989 ZNF514Q96K75 400 aaPredicted RBP13.39□□□□□ -0.27
CSPG4P12-202ENST00000559989 PDCD2LQ9BRP1 358 aa13.39□□□□□ -0.27
CSPG4P12-202ENST00000559989 C9JVG2 144 aa13.39□□□□□ -0.27
CSPG4P12-202ENST00000559989 C6orf120Q7Z4R8 191 aa13.39□□□□□ -0.27
CSPG4P12-202ENST00000559989 TMEM234Q8WY98 164 aa13.39□□□□□ -0.27
CSPG4P12-202ENST00000559989 NAA11Q9BSU3 229 aaPredicted RBP13.39□□□□□ -0.27
CSPG4P12-202ENST00000559989 MROQ9BYG7 248 aa13.39□□□□□ -0.27
CSPG4P12-202ENST00000559989 GLTPQ9NZD2 209 aa13.39□□□□□ -0.27
CSPG4P12-202ENST00000559989 COL20A1Q9P218 1284 aa13.39□□□□□ -0.27
CSPG4P12-202ENST00000559989 SHOX2O60902 331 aaPredicted RBP13.39□□□□□ -0.27
CSPG4P12-202ENST00000559989 LGALS2P05162 132 aa13.39□□□□□ -0.27
CSPG4P12-202ENST00000559989 RHOQP17081 205 aa13.39□□□□□ -0.27
CSPG4P12-202ENST00000559989 MC2RQ01718 297 aa13.39□□□□□ -0.27
CSPG4P12-202ENST00000559989 ELP2Q6IA86 826 aa13.39□□□□□ -0.27
CSPG4P12-202ENST00000559989 VITQ6UXI7 678 aa13.39□□□□□ -0.27
CSPG4P12-202ENST00000559989 CMTM1Q8IZ96 169 aa13.39□□□□□ -0.27
CSPG4P12-202ENST00000559989 OR5B17Q8NGF7 314 aa13.39□□□□□ -0.27
CSPG4P12-202ENST00000559989 PLD4Q96BZ4 506 aa13.39□□□□□ -0.27
CSPG4P12-202ENST00000559989 PCDHGA7Q9Y5G6 932 aa13.39□□□□□ -0.27
CSPG4P12-202ENST00000559989 GON4LQ3T8J9 2241 aa13.39□□□□□ -0.27
CSPG4P12-202ENST00000559989 NPPAP01160 153 aa13.39□□□□□ -0.27
CSPG4P12-202ENST00000559989 CHRNB4P30926 498 aa13.39□□□□□ -0.27
CSPG4P12-202ENST00000559989 EVI2BP34910 448 aa13.39□□□□□ -0.27
CSPG4P12-202ENST00000559989 EN1Q05925 392 aaPredicted RBP13.39□□□□□ -0.27
CSPG4P12-202ENST00000559989 FSTL4Q6MZW2 842 aa13.39□□□□□ -0.27
CSPG4P12-202ENST00000559989 FITM2Q8N6M3 262 aa13.39□□□□□ -0.27
CSPG4P12-202ENST00000559989 NUS1Q96E22 293 aa13.39□□□□□ -0.27
CSPG4P12-202ENST00000559989 PGAM5Q96HS1 289 aa13.39□□□□□ -0.27
CSPG4P12-202ENST00000559989 DUSP9Q99956 384 aaKnown RBP13.39□□□□□ -0.27
CSPG4P12-202ENST00000559989 ACTL8Q9H568 366 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms