RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 PAGE2Q7Z2X7 111 aa9.6□□□□□ -0.87
LRRC28-216ENST00000559819 OR6Q1Q8NGQ2 317 aa9.6□□□□□ -0.87
LRRC28-216ENST00000559819 CXorf40BQ96DE9 158 aa9.6□□□□□ -0.87
LRRC28-216ENST00000559819 VMP1Q96GC9 406 aa9.6□□□□□ -0.87
LRRC28-216ENST00000559819 CRISPLD2Q9H0B8 497 aa9.6□□□□□ -0.87
LRRC28-216ENST00000559819 RNF167Q9H6Y7 350 aa9.6□□□□□ -0.87
LRRC28-216ENST00000559819 MYNNQ9NPC7 610 aa9.6□□□□□ -0.87
LRRC28-216ENST00000559819 ATAD3AQ9NVI7 634 aa9.6□□□□□ -0.87
LRRC28-216ENST00000559819 TAS2R16Q9NYV7 291 aa9.6□□□□□ -0.87
LRRC28-216ENST00000559819 TAAR2Q9P1P5 351 aa9.6□□□□□ -0.87
LRRC28-216ENST00000559819 PSORS1C1Q9UIG5 152 aa9.6□□□□□ -0.87
LRRC28-216ENST00000559819 OTOL1A6NHN0 477 aaPredicted RBP9.6□□□□□ -0.87
LRRC28-216ENST00000559819 EFCAB9A8MZ26 197 aa9.6□□□□□ -0.87
LRRC28-216ENST00000559819 RECKO95980 971 aa9.6□□□□□ -0.87
LRRC28-216ENST00000559819 ADRA2AP08913 450 aa9.6□□□□□ -0.87
LRRC28-216ENST00000559819 GADD45AP24522 165 aa9.6□□□□□ -0.87
LRRC28-216ENST00000559819 CRISP3P54108 245 aa9.6□□□□□ -0.87
LRRC28-216ENST00000559819 HTRA4P83105 476 aaPredicted RBP9.6□□□□□ -0.87
LRRC28-216ENST00000559819 CD300CQ08708 224 aa9.6□□□□□ -0.87
LRRC28-216ENST00000559819 PRAMEF14Q5SWL7 426 aa9.6□□□□□ -0.87
LRRC28-216ENST00000559819 UBE2UQ5VVX9 321 aa9.6□□□□□ -0.87
LRRC28-216ENST00000559819 PRAMEF13Q5VWM6 474 aa9.6□□□□□ -0.87
LRRC28-216ENST00000559819 CACUL1Q86Y37 369 aa9.6□□□□□ -0.87
LRRC28-216ENST00000559819 PLD3Q8IV08 490 aa9.6□□□□□ -0.87
LRRC28-216ENST00000559819 SLC44A2Q8IWA5 706 aaPredicted RBP9.6□□□□□ -0.87
LRRC28-216ENST00000559819 DNAJC22Q8N4W6 341 aa9.6□□□□□ -0.87
LRRC28-216ENST00000559819 FBXO15Q8NCQ5 510 aaPredicted RBP9.6□□□□□ -0.87
LRRC28-216ENST00000559819 LRIG1Q96JA1 1093 aa9.6□□□□□ -0.87
LRRC28-216ENST00000559819 ITPAQ9BY32 194 aa9.6□□□□□ -0.87
LRRC28-216ENST00000559819 WDR12Q9GZL7 423 aaKnown RBP9.6□□□□□ -0.87
LRRC28-216ENST00000559819 SLIRPQ9GZT3 109 aaKnown RBP9.6□□□□□ -0.87
LRRC28-216ENST00000559819 EHD1Q9H4M9 534 aa9.6□□□□□ -0.87
LRRC28-216ENST00000559819 SLAMF7Q9NQ25 335 aa9.6□□□□□ -0.87
LRRC28-216ENST00000559819 POLE4Q9NR33 117 aa9.6□□□□□ -0.87
LRRC28-216ENST00000559819 TM7SF3Q9NS93 570 aa9.6□□□□□ -0.87
LRRC28-216ENST00000559819 TAS2R9Q9NYW1 312 aa9.6□□□□□ -0.87
LRRC28-216ENST00000559819 MAPRE3Q9UPY8 281 aa9.6□□□□□ -0.87
LRRC28-216ENST00000559819 ASF1AQ9Y294 204 aa9.6□□□□□ -0.87
LRRC28-216ENST00000559819 TRBC2A0A5B9 178 aa9.59□□□□□ -0.87
LRRC28-216ENST00000559819 PSMD11O00231 422 aa9.59□□□□□ -0.87
LRRC28-216ENST00000559819 TBX6O95947 436 aaPredicted RBP9.59□□□□□ -0.87
LRRC28-216ENST00000559819 ACADLP28330 430 aa9.59□□□□□ -0.87
LRRC28-216ENST00000559819 TPP2P29144 1249 aaPredicted RBP9.59□□□□□ -0.87
LRRC28-216ENST00000559819 MAPK11Q15759 364 aa9.59□□□□□ -0.87
LRRC28-216ENST00000559819 C9orf64Q5T6V5 341 aa9.59□□□□□ -0.87
LRRC28-216ENST00000559819 NIPAL1Q6NVV3 410 aa9.59□□□□□ -0.87
LRRC28-216ENST00000559819 TNFAIP8L2Q6P589 184 aaPredicted RBP9.59□□□□□ -0.87
LRRC28-216ENST00000559819 ADGRF3Q8IZF5 1079 aa9.59□□□□□ -0.87
LRRC28-216ENST00000559819 OXR1Q8N573 874 aa9.59□□□□□ -0.87
LRRC28-216ENST00000559819 RHOXF1Q8NHV9 184 aa9.59□□□□□ -0.87
LRRC28-216ENST00000559819 SLC38A4Q969I6 547 aa9.59□□□□□ -0.87
LRRC28-216ENST00000559819 FAM129BQ96TA1 746 aa9.59□□□□□ -0.87
LRRC28-216ENST00000559819 BCL7BQ9BQE9 202 aa9.59□□□□□ -0.87
LRRC28-216ENST00000559819 MIEF1Q9NQG6 463 aa9.59□□□□□ -0.87
LRRC28-216ENST00000559819 CUEDC1Q9NWM3 386 aaPredicted RBP9.59□□□□□ -0.87
LRRC28-216ENST00000559819 SLC23A2Q9UGH3 650 aa9.59□□□□□ -0.87
LRRC28-216ENST00000559819 LRRK1Q38SD2 2015 aa9.59□□□□□ -0.87
LRRC28-216ENST00000559819 FEZF1A0PJY2 475 aa9.59□□□□□ -0.87
LRRC28-216ENST00000559819 KRBA1A5PL33 1030 aa9.59□□□□□ -0.87
LRRC28-216ENST00000559819 EFCAB14O75071 495 aa9.59□□□□□ -0.87
LRRC28-216ENST00000559819 FGF19O95750 216 aa9.59□□□□□ -0.87
LRRC28-216ENST00000559819 PRNPP04156 253 aa9.59□□□□□ -0.87
LRRC28-216ENST00000559819 CDK1P06493 297 aa9.59□□□□□ -0.87
LRRC28-216ENST00000559819 ADRB3P13945 408 aa9.59□□□□□ -0.87
LRRC28-216ENST00000559819 CDH3P22223 829 aa9.59□□□□□ -0.87
LRRC28-216ENST00000559819 PSMB5P28074 263 aa9.59□□□□□ -0.87
LRRC28-216ENST00000559819 MAPK9P45984 424 aa9.59□□□□□ -0.87
LRRC28-216ENST00000559819 XCR1P46094 333 aa9.59□□□□□ -0.87
LRRC28-216ENST00000559819 ALDH9A1P49189 494 aa9.59□□□□□ -0.87
LRRC28-216ENST00000559819 DNASE1L3Q13609 305 aa9.59□□□□□ -0.87
LRRC28-216ENST00000559819 OXA1LQ15070 435 aa9.59□□□□□ -0.87
LRRC28-216ENST00000559819 DUSP7Q16829 419 aa9.59□□□□□ -0.87
LRRC28-216ENST00000559819 TIGD6Q17RP2 521 aa9.59□□□□□ -0.87
LRRC28-216ENST00000559819 TRIM40Q6P9F5 258 aa9.59□□□□□ -0.87
LRRC28-216ENST00000559819 C11orf96Q7Z7L8 435 aa9.59□□□□□ -0.87
LRRC28-216ENST00000559819 UCN3Q969E3 161 aa9.59□□□□□ -0.87
LRRC28-216ENST00000559819 ZHX1-C8orf76Q96EF9 292 aa9.59□□□□□ -0.87
LRRC28-216ENST00000559819 F2RL3Q96RI0 385 aa9.59□□□□□ -0.87
LRRC28-216ENST00000559819 NEURL2Q9BR09 285 aa9.59□□□□□ -0.87
LRRC28-216ENST00000559819 RSPO3Q9BXY4 272 aaPredicted RBP9.59□□□□□ -0.87
LRRC28-216ENST00000559819 ZCCHC2Q9C0B9 1178 aaKnown RBP9.59□□□□□ -0.87
LRRC28-216ENST00000559819 DCSTAMPQ9H295 470 aa9.59□□□□□ -0.87
LRRC28-216ENST00000559819 EPHX3Q9H6B9 360 aa9.59□□□□□ -0.87
LRRC28-216ENST00000559819 TMEM38AQ9H6F2 299 aa9.59□□□□□ -0.87
LRRC28-216ENST00000559819 ACER3Q9NUN7 267 aa9.59□□□□□ -0.87
LRRC28-216ENST00000559819 SAGE1Q9NXZ1 904 aa9.59□□□□□ -0.87
LRRC28-216ENST00000559819 OSGIN1Q9UJX0 560 aa9.59□□□□□ -0.87
LRRC28-216ENST00000559819 DUSP12Q9UNI6 340 aa9.59□□□□□ -0.87
LRRC28-216ENST00000559819 POFUT2Q9Y2G5 429 aa9.59□□□□□ -0.87
LRRC28-216ENST00000559819 MRPS23Q9Y3D9 190 aaKnown RBP9.59□□□□□ -0.87
LRRC28-216ENST00000559819 SNX11Q9Y5W9 270 aa9.59□□□□□ -0.87
LRRC28-216ENST00000559819 IRAK3Q9Y616 596 aa9.59□□□□□ -0.87
LRRC28-216ENST00000559819 PLPP1O14494 284 aa9.58□□□□□ -0.88
LRRC28-216ENST00000559819 PTHP01270 115 aa9.58□□□□□ -0.88
LRRC28-216ENST00000559819 ARAFP10398 606 aa9.58□□□□□ -0.88
LRRC28-216ENST00000559819 GABRB1P18505 474 aa9.58□□□□□ -0.88
LRRC28-216ENST00000559819 ITGB7P26010 798 aa9.58□□□□□ -0.88
LRRC28-216ENST00000559819 SERPINB10P48595 397 aa9.58□□□□□ -0.88
LRRC28-216ENST00000559819 CD97P48960 835 aa9.58□□□□□ -0.88
LRRC28-216ENST00000559819 CLK1P49759 484 aaKnown RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms