RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 PMF1-BGLAPU3KQ54 211 aa10.23□□□□□ -0.77
CARMIL3-202ENST00000559694 KIR2DS5A0A0G2JLQ3 304 aa10.23□□□□□ -0.77
CARMIL3-202ENST00000559694 A0A0G2JNG1 304 aa10.23□□□□□ -0.77
CARMIL3-202ENST00000559694 FUOMA2VDF0 154 aa10.23□□□□□ -0.77
CARMIL3-202ENST00000559694 ZNF99A8MXY4 864 aaPredicted RBP10.23□□□□□ -0.77
CARMIL3-202ENST00000559694 GPR89AB7ZAQ6 455 aa10.23□□□□□ -0.77
CARMIL3-202ENST00000559694 KIR2DS3K7RE56 304 aa10.23□□□□□ -0.77
CARMIL3-202ENST00000559694 TLR4O00206 839 aa10.23□□□□□ -0.77
CARMIL3-202ENST00000559694 SNNO75324 88 aaPredicted RBP10.23□□□□□ -0.77
CARMIL3-202ENST00000559694 REM1O75628 298 aa10.23□□□□□ -0.77
CARMIL3-202ENST00000559694 UBXN7O94888 489 aa10.23□□□□□ -0.77
CARMIL3-202ENST00000559694 MMP2P08253 660 aa10.23□□□□□ -0.77
CARMIL3-202ENST00000559694 CCNYL3P0C7X3 344 aa10.23□□□□□ -0.77
CARMIL3-202ENST00000559694 GPR89BP0CG08 455 aa10.23□□□□□ -0.77
CARMIL3-202ENST00000559694 F3P13726 295 aa10.23□□□□□ -0.77
CARMIL3-202ENST00000559694 IGFBP5P24593 272 aa10.23□□□□□ -0.77
CARMIL3-202ENST00000559694 FCHO2Q0JRZ9 810 aa10.23□□□□□ -0.77
CARMIL3-202ENST00000559694 BIKQ13323 160 aa10.23□□□□□ -0.77
CARMIL3-202ENST00000559694 KIR2DS5Q14953 304 aa10.23□□□□□ -0.77
CARMIL3-202ENST00000559694 MED22Q15528 200 aa10.23□□□□□ -0.77
CARMIL3-202ENST00000559694 AHSA2Q719I0 299 aa10.23□□□□□ -0.77
CARMIL3-202ENST00000559694 PDZD3Q86UT5 571 aa10.23□□□□□ -0.77
CARMIL3-202ENST00000559694 SLC22A16Q86VW1 577 aa10.23□□□□□ -0.77
CARMIL3-202ENST00000559694 OXR1Q8N573 874 aa10.23□□□□□ -0.77
CARMIL3-202ENST00000559694 EID2Q8N6I1 236 aa10.23□□□□□ -0.77
CARMIL3-202ENST00000559694 CSNK1A1LQ8N752 337 aa10.23□□□□□ -0.77
CARMIL3-202ENST00000559694 COX18Q8N8Q8 333 aa10.23□□□□□ -0.77
CARMIL3-202ENST00000559694 LMNTD1Q8N9Z9 388 aa10.23□□□□□ -0.77
CARMIL3-202ENST00000559694 PLA2G15Q8NCC3 412 aa10.23□□□□□ -0.77
CARMIL3-202ENST00000559694 VANGL1Q8TAA9 524 aaPredicted RBP10.23□□□□□ -0.77
CARMIL3-202ENST00000559694 DMRTB1Q96MA1 342 aa10.23□□□□□ -0.77
CARMIL3-202ENST00000559694 YTHDF1Q9BYJ9 559 aaKnown RBP10.23□□□□□ -0.77
CARMIL3-202ENST00000559694 CLEC4MQ9H2X3 399 aaPredicted RBP10.23□□□□□ -0.77
CARMIL3-202ENST00000559694 MBNL1Q9NR56 388 aaKnown RBP10.23□□□□□ -0.77
CARMIL3-202ENST00000559694 TAAR2Q9P1P5 351 aa10.23□□□□□ -0.77
CARMIL3-202ENST00000559694 LRIT1Q9P2V4 623 aa10.23□□□□□ -0.77
CARMIL3-202ENST00000559694 PHF11Q9UIL8 331 aa10.23□□□□□ -0.77
CARMIL3-202ENST00000559694 HCN2Q9UL51 889 aa10.23□□□□□ -0.77
CARMIL3-202ENST00000559694 FAM234BA2RU67 622 aa10.22□□□□□ -0.77
CARMIL3-202ENST00000559694 EPOPA6NHQ4 379 aa10.22□□□□□ -0.77
CARMIL3-202ENST00000559694 AOAHP28039 575 aa10.22□□□□□ -0.77
CARMIL3-202ENST00000559694 PRLHRP49683 370 aa10.22□□□□□ -0.77
CARMIL3-202ENST00000559694 DIO3P55073 304 aa10.22□□□□□ -0.77
CARMIL3-202ENST00000559694 RACK1P63244 317 aaKnown RBP10.22□□□□□ -0.77
CARMIL3-202ENST00000559694 TTLL10Q6ZVT0 673 aa10.22□□□□□ -0.77
CARMIL3-202ENST00000559694 FAM20CQ8IXL6 584 aa10.22□□□□□ -0.77
CARMIL3-202ENST00000559694 MINDY2Q8NBR6 621 aa10.22□□□□□ -0.77
CARMIL3-202ENST00000559694 SMRP1Q8NCR6 262 aa10.22□□□□□ -0.77
CARMIL3-202ENST00000559694 OR5AK3PQ8NH89 298 aa10.22□□□□□ -0.77
CARMIL3-202ENST00000559694 ZNF563Q8TA94 476 aa10.22□□□□□ -0.77
CARMIL3-202ENST00000559694 TPK1Q9H3S4 243 aa10.22□□□□□ -0.77
CARMIL3-202ENST00000559694 K7ESM1 405 aa10.22□□□□□ -0.77
CARMIL3-202ENST00000559694 ARPC2O15144 300 aa10.22□□□□□ -0.77
CARMIL3-202ENST00000559694 AIREO43918 545 aa10.22□□□□□ -0.77
CARMIL3-202ENST00000559694 TCEA1P23193 301 aaKnown RBP10.22□□□□□ -0.77
CARMIL3-202ENST00000559694 CD27P26842 260 aa10.22□□□□□ -0.77
CARMIL3-202ENST00000559694 UFM1P61960 85 aa10.22□□□□□ -0.77
CARMIL3-202ENST00000559694 MYBPC1Q00872 1141 aa10.22□□□□□ -0.77
CARMIL3-202ENST00000559694 QPRTQ15274 297 aa10.22□□□□□ -0.77
CARMIL3-202ENST00000559694 TMEM52BQ4KMG9 183 aa10.22□□□□□ -0.77
CARMIL3-202ENST00000559694 C6orf136Q5SQH8 315 aa10.22□□□□□ -0.77
CARMIL3-202ENST00000559694 PLEKHM3Q6ZWE6 761 aa10.22□□□□□ -0.77
CARMIL3-202ENST00000559694 PHF10Q8WUB8 498 aaKnown RBP10.22□□□□□ -0.77
CARMIL3-202ENST00000559694 DGAT2Q96PD7 388 aa10.22□□□□□ -0.77
CARMIL3-202ENST00000559694 GFM1Q96RP9 751 aaKnown RBP10.22□□□□□ -0.77
CARMIL3-202ENST00000559694 ELOVL7A1L3X0 281 aa10.22□□□□□ -0.77
CARMIL3-202ENST00000559694 PEX12O00623 359 aa10.22□□□□□ -0.77
CARMIL3-202ENST00000559694 AQP9O43315 295 aa10.22□□□□□ -0.77
CARMIL3-202ENST00000559694 GABRB3P28472 473 aa10.22□□□□□ -0.77
CARMIL3-202ENST00000559694 TALDO1P37837 337 aa10.22□□□□□ -0.77
CARMIL3-202ENST00000559694 MTPNP58546 118 aa10.22□□□□□ -0.77
CARMIL3-202ENST00000559694 PHC1P78364 1004 aa10.22□□□□□ -0.77
CARMIL3-202ENST00000559694 DAG1Q14118 895 aa10.22□□□□□ -0.77
CARMIL3-202ENST00000559694 PCBP2Q15366 365 aaKnown RBP eCLIP10.22□□□□□ -0.77
CARMIL3-202ENST00000559694 TAB1Q15750 504 aa10.22□□□□□ -0.77
CARMIL3-202ENST00000559694 TYSND1Q2T9J0 566 aa10.22□□□□□ -0.77
CARMIL3-202ENST00000559694 GCNT6Q5T4J0 391 aa10.22□□□□□ -0.77
CARMIL3-202ENST00000559694 AFMIDQ63HM1 303 aa10.22□□□□□ -0.77
CARMIL3-202ENST00000559694 FAM91A1Q658Y4 838 aa10.22□□□□□ -0.77
CARMIL3-202ENST00000559694 RAB43Q86YS6 212 aa10.22□□□□□ -0.77
CARMIL3-202ENST00000559694 SDR16C5Q8N3Y7 309 aa10.22□□□□□ -0.77
CARMIL3-202ENST00000559694 OR52E1Q8NGJ3 308 aa10.22□□□□□ -0.77
CARMIL3-202ENST00000559694 SOX17Q9H6I2 414 aaPredicted RBP10.22□□□□□ -0.77
CARMIL3-202ENST00000559694 KAT8Q9H7Z6 458 aaKnown RBP10.22□□□□□ -0.77
CARMIL3-202ENST00000559694 PCDHB3Q9Y5E6 796 aa10.22□□□□□ -0.77
CARMIL3-202ENST00000559694 KRT87PA6NCN2 255 aa10.21□□□□□ -0.77
CARMIL3-202ENST00000559694 CAPN5O15484 640 aaPredicted RBP10.21□□□□□ -0.77
CARMIL3-202ENST00000559694 SLC25A12O75746 678 aa10.21□□□□□ -0.77
CARMIL3-202ENST00000559694 IL1RNP18510 177 aa10.21□□□□□ -0.77
CARMIL3-202ENST00000559694 SLC5A2P31639 672 aa10.21□□□□□ -0.77
CARMIL3-202ENST00000559694 IFNGR2P38484 337 aa10.21□□□□□ -0.77
CARMIL3-202ENST00000559694 RXRGP48443 463 aa10.21□□□□□ -0.77
CARMIL3-202ENST00000559694 HK3P52790 923 aa10.21□□□□□ -0.77
CARMIL3-202ENST00000559694 PPP1R8Q12972 351 aaKnown RBP10.21□□□□□ -0.77
CARMIL3-202ENST00000559694 CATSPEREQ5SY80 951 aa10.21□□□□□ -0.77
CARMIL3-202ENST00000559694 CHMP1BQ7LBR1 199 aa10.21□□□□□ -0.77
CARMIL3-202ENST00000559694 OR4K1Q8NGD4 311 aa10.21□□□□□ -0.77
CARMIL3-202ENST00000559694 RHBDF1Q96CC6 855 aa10.21□□□□□ -0.77
CARMIL3-202ENST00000559694 RSPRY1Q96DX4 576 aa10.21□□□□□ -0.77
CARMIL3-202ENST00000559694 SLC35G5Q96KT7 338 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms