RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 RNLSQ5VYX0 342 aa2.83□□□□□ -1.96
VPS13C-207ENST00000558919 PLPP4Q5VZY2 271 aa2.83□□□□□ -1.96
VPS13C-207ENST00000558919 TRAT1Q6PIZ9 186 aa2.83□□□□□ -1.96
VPS13C-207ENST00000558919 VITQ6UXI7 678 aa2.83□□□□□ -1.96
VPS13C-207ENST00000558919 RFPL4BQ6ZWI9 263 aa2.83□□□□□ -1.96
VPS13C-207ENST00000558919 Q71RC1 249 aaPredicted RBP2.83□□□□□ -1.96
VPS13C-207ENST00000558919 MCM10Q7L590 875 aa2.83□□□□□ -1.96
VPS13C-207ENST00000558919 ANKRD46Q86W74 232 aa2.83□□□□□ -1.96
VPS13C-207ENST00000558919 CREBRFQ8IUR6 639 aa2.83□□□□□ -1.96
VPS13C-207ENST00000558919 RTL3Q8N8U3 475 aaKnown RBP2.83□□□□□ -1.96
VPS13C-207ENST00000558919 PRMT1Q99873 361 aaKnown RBP2.83□□□□□ -1.96
VPS13C-207ENST00000558919 MINDY3Q9H8M7 445 aa2.83□□□□□ -1.96
VPS13C-207ENST00000558919 MARCH7Q9H992 704 aa2.83□□□□□ -1.96
VPS13C-207ENST00000558919 WDR41Q9HAD4 459 aa2.83□□□□□ -1.96
VPS13C-207ENST00000558919 THYN1Q9P016 225 aa2.83□□□□□ -1.96
VPS13C-207ENST00000558919 FER1L5A0AVI2 2057 aa2.83□□□□□ -1.96
VPS13C-207ENST00000558919 RPL37AP8A6NKH3 93 aa2.82□□□□□ -1.96
VPS13C-207ENST00000558919 KLLNB2CW77 178 aa2.82□□□□□ -1.96
VPS13C-207ENST00000558919 SELENOFO60613 162 aa2.82□□□□□ -1.96
VPS13C-207ENST00000558919 MT-ND1P03886 318 aa2.82□□□□□ -1.96
VPS13C-207ENST00000558919 GP5P40197 560 aa2.82□□□□□ -1.96
VPS13C-207ENST00000558919 ELK3P41970 407 aa2.82□□□□□ -1.96
VPS13C-207ENST00000558919 SLC1A4P43007 532 aa2.82□□□□□ -1.96
VPS13C-207ENST00000558919 ABRQ12979 859 aa2.82□□□□□ -1.96
VPS13C-207ENST00000558919 MUC21Q5SSG8 566 aa2.82□□□□□ -1.96
VPS13C-207ENST00000558919 EMBQ6PCB8 327 aa2.82□□□□□ -1.96
VPS13C-207ENST00000558919 METTL23Q86XA0 190 aa2.82□□□□□ -1.96
VPS13C-207ENST00000558919 THNSL1Q8IYQ7 743 aa2.82□□□□□ -1.96
VPS13C-207ENST00000558919 OR1B1Q8NGR6 318 aa2.82□□□□□ -1.96
VPS13C-207ENST00000558919 AGAP11Q8TF27 550 aa2.82□□□□□ -1.96
VPS13C-207ENST00000558919 DNASE1L2Q92874 299 aa2.82□□□□□ -1.96
VPS13C-207ENST00000558919 SGF29Q96ES7 293 aa2.82□□□□□ -1.96
VPS13C-207ENST00000558919 BSCL2Q96G97 398 aaPredicted RBP2.82□□□□□ -1.96
VPS13C-207ENST00000558919 GBP5Q96PP8 586 aa2.82□□□□□ -1.96
VPS13C-207ENST00000558919 INTS14Q96SY0 518 aa2.82□□□□□ -1.96
VPS13C-207ENST00000558919 CCM2Q9BSQ5 444 aa2.82□□□□□ -1.96
VPS13C-207ENST00000558919 EDEM3Q9BZQ6 932 aa2.82□□□□□ -1.96
VPS13C-207ENST00000558919 VIPAS39Q9H9C1 493 aa2.82□□□□□ -1.96
VPS13C-207ENST00000558919 RAB9BQ9NP90 201 aa2.82□□□□□ -1.96
VPS13C-207ENST00000558919 DEPPQ9NTK1 212 aa2.82□□□□□ -1.96
VPS13C-207ENST00000558919 TERF2IPQ9NYB0 399 aa2.82□□□□□ -1.96
VPS13C-207ENST00000558919 GIMAP2Q9UG22 337 aa2.82□□□□□ -1.96
VPS13C-207ENST00000558919 SPATA2Q9UM82 520 aa2.82□□□□□ -1.96
VPS13C-207ENST00000558919 PFASO15067 1338 aa2.82□□□□□ -1.96
VPS13C-207ENST00000558919 TRBV5-4A0A0C4DH59 114 aa2.81□□□□□ -1.96
VPS13C-207ENST00000558919 ANHXE9PGG2 379 aa2.81□□□□□ -1.96
VPS13C-207ENST00000558919 IFIT3O14879 490 aaKnown RBP2.81□□□□□ -1.96
VPS13C-207ENST00000558919 WDR46O15213 610 aaKnown RBP2.81□□□□□ -1.96
VPS13C-207ENST00000558919 ACSL4O60488 711 aa2.81□□□□□ -1.96
VPS13C-207ENST00000558919 GRAP2O75791 330 aa2.81□□□□□ -1.96
VPS13C-207ENST00000558919 OR6B1O95007 311 aa2.81□□□□□ -1.96
VPS13C-207ENST00000558919 IFNAR1P17181 557 aa2.81□□□□□ -1.96
VPS13C-207ENST00000558919 SRD5A2P31213 254 aa2.81□□□□□ -1.96
VPS13C-207ENST00000558919 SOAT1P35610 550 aa2.81□□□□□ -1.96
VPS13C-207ENST00000558919 PRKCIP41743 596 aa2.81□□□□□ -1.96
VPS13C-207ENST00000558919 NPBWR1P48145 328 aa2.81□□□□□ -1.96
VPS13C-207ENST00000558919 BACE1P56817 501 aa2.81□□□□□ -1.96
VPS13C-207ENST00000558919 RFTN2Q52LD8 501 aaPredicted RBP2.81□□□□□ -1.96
VPS13C-207ENST00000558919 LCE3EQ5T5B0 92 aa2.81□□□□□ -1.96
VPS13C-207ENST00000558919 LEMD1Q68G75 181 aa2.81□□□□□ -1.96
VPS13C-207ENST00000558919 C17orf107Q6ZR85 190 aa2.81□□□□□ -1.96
VPS13C-207ENST00000558919 LRRC49Q8IUZ0 686 aa2.81□□□□□ -1.96
VPS13C-207ENST00000558919 C11orf53Q8IXP5 236 aa2.81□□□□□ -1.96
VPS13C-207ENST00000558919 TDHQ8IZJ6 230 aa2.81□□□□□ -1.96
VPS13C-207ENST00000558919 ELMOD1Q8N336 334 aa2.81□□□□□ -1.96
VPS13C-207ENST00000558919 SLC43A2Q8N370 569 aa2.81□□□□□ -1.96
VPS13C-207ENST00000558919 NME8Q8N427 588 aa2.81□□□□□ -1.96
VPS13C-207ENST00000558919 BANPQ8N9N5 519 aa2.81□□□□□ -1.96
VPS13C-207ENST00000558919 OR13C5Q8NGS8 318 aa2.81□□□□□ -1.96
VPS13C-207ENST00000558919 OR6F1Q8NGZ6 308 aa2.81□□□□□ -1.96
VPS13C-207ENST00000558919 RHOXF1Q8NHV9 184 aa2.81□□□□□ -1.96
VPS13C-207ENST00000558919 C8orf46Q8TAG6 207 aa2.81□□□□□ -1.96
VPS13C-207ENST00000558919 SMPDL3AQ92484 453 aa2.81□□□□□ -1.96
VPS13C-207ENST00000558919 SLC35C1Q96A29 364 aa2.81□□□□□ -1.96
VPS13C-207ENST00000558919 EXOC4Q96A65 974 aa2.81□□□□□ -1.96
VPS13C-207ENST00000558919 TNFRSF13CQ96RJ3 184 aa2.81□□□□□ -1.96
VPS13C-207ENST00000558919 ATG101Q9BSB4 218 aa2.81□□□□□ -1.96
VPS13C-207ENST00000558919 SP140LQ9H930 580 aa2.81□□□□□ -1.96
VPS13C-207ENST00000558919 CLEC5AQ9NY25 188 aa2.81□□□□□ -1.96
VPS13C-207ENST00000558919 GMEB2Q9UKD1 530 aa2.81□□□□□ -1.96
VPS13C-207ENST00000558919 SALL1Q9NSC2 1324 aa2.8□□□□□ -1.96
VPS13C-207ENST00000558919 A0A1B0GTH9 108 aa2.8□□□□□ -1.96
VPS13C-207ENST00000558919 IGLON5A6NGN9 336 aa2.8□□□□□ -1.96
VPS13C-207ENST00000558919 ANKDD1BA6NHY2 528 aa2.8□□□□□ -1.96
VPS13C-207ENST00000558919 KBTBD13C9JR72 458 aa2.8□□□□□ -1.96
VPS13C-207ENST00000558919 E9PAM4 449 aa2.8□□□□□ -1.96
VPS13C-207ENST00000558919 FBP2O00757 339 aa2.8□□□□□ -1.96
VPS13C-207ENST00000558919 SLC30A4O14863 429 aa2.8□□□□□ -1.96
VPS13C-207ENST00000558919 P2RX6O15547 441 aa2.8□□□□□ -1.96
VPS13C-207ENST00000558919 TIMM44O43615 452 aa2.8□□□□□ -1.96
VPS13C-207ENST00000558919 CLN5O75503 358 aa2.8□□□□□ -1.96
VPS13C-207ENST00000558919 SEMA4FO95754 770 aa2.8□□□□□ -1.96
VPS13C-207ENST00000558919 RLN1P04808 185 aa2.8□□□□□ -1.96
VPS13C-207ENST00000558919 HSP90AA1P07900 732 aaKnown RBP2.8□□□□□ -1.96
VPS13C-207ENST00000558919 FAM200BP0CF97 657 aa2.8□□□□□ -1.96
VPS13C-207ENST00000558919 IER3P46695 156 aa2.8□□□□□ -1.96
VPS13C-207ENST00000558919 RPL34P49207 117 aaKnown RBP2.8□□□□□ -1.96
VPS13C-207ENST00000558919 RBBP4Q09028 425 aa2.8□□□□□ -1.96
VPS13C-207ENST00000558919 GPR50Q13585 617 aa2.8□□□□□ -1.96
VPS13C-207ENST00000558919 CEACAM7Q14002 265 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms