RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 CLCA1A8K7I4 914 aa4.8□□□□□ -1.64
SPG11-208ENST00000558155 RNF212BA8MTL3 300 aa4.8□□□□□ -1.64
SPG11-208ENST00000558155 INAFM1C9JVW0 142 aa4.8□□□□□ -1.64
SPG11-208ENST00000558155 GFYI3L273 518 aa4.8□□□□□ -1.64
SPG11-208ENST00000558155 CLDN4O14493 209 aa4.8□□□□□ -1.64
SPG11-208ENST00000558155 OR1F1O43749 312 aa4.8□□□□□ -1.64
SPG11-208ENST00000558155 CEP104O60308 925 aa4.8□□□□□ -1.64
SPG11-208ENST00000558155 DNAJB6O75190 326 aa4.8□□□□□ -1.64
SPG11-208ENST00000558155 NIPSNAP2O75323 286 aa4.8□□□□□ -1.64
SPG11-208ENST00000558155 OR2J2O76002 312 aa4.8□□□□□ -1.64
SPG11-208ENST00000558155 MYO1DO94832 1006 aa4.8□□□□□ -1.64
SPG11-208ENST00000558155 VAPBO95292 243 aa4.8□□□□□ -1.64
SPG11-208ENST00000558155 EPPINO95925 133 aa4.8□□□□□ -1.64
SPG11-208ENST00000558155 IFNA2P01563 188 aa4.8□□□□□ -1.64
SPG11-208ENST00000558155 IL2RAP01589 272 aa4.8□□□□□ -1.64
SPG11-208ENST00000558155 SERPIND1P05546 499 aa4.8□□□□□ -1.64
SPG11-208ENST00000558155 FREM3P0C091 2139 aa4.8□□□□□ -1.64
SPG11-208ENST00000558155 MPC1LP0DKB6 136 aa4.8□□□□□ -1.64
SPG11-208ENST00000558155 ENO3P13929 434 aaPredicted RBP4.8□□□□□ -1.64
SPG11-208ENST00000558155 BMP7P18075 431 aa4.8□□□□□ -1.64
SPG11-208ENST00000558155 MAOAP21397 527 aa4.8□□□□□ -1.64
SPG11-208ENST00000558155 CCND1P24385 295 aa4.8□□□□□ -1.64
SPG11-208ENST00000558155 CEACAM8P31997 349 aaPredicted RBP4.8□□□□□ -1.64
SPG11-208ENST00000558155 TIMP3P35625 211 aa4.8□□□□□ -1.64
SPG11-208ENST00000558155 GRIA1P42261 906 aa4.8□□□□□ -1.64
SPG11-208ENST00000558155 SKIV2L2P42285 1042 aaKnown RBP4.8□□□□□ -1.64
SPG11-208ENST00000558155 MAGEA5P43359 124 aa4.8□□□□□ -1.64
SPG11-208ENST00000558155 NAP1L1P55209 391 aaKnown RBP4.8□□□□□ -1.64
SPG11-208ENST00000558155 OLR1P78380 273 aa4.8□□□□□ -1.64
SPG11-208ENST00000558155 RGS1Q08116 209 aa4.8□□□□□ -1.64
SPG11-208ENST00000558155 TBL3Q12788 808 aaKnown RBP4.8□□□□□ -1.64
SPG11-208ENST00000558155 HYAL2Q12891 473 aa4.8□□□□□ -1.64
SPG11-208ENST00000558155 BMPR2Q13873 1038 aa4.8□□□□□ -1.64
SPG11-208ENST00000558155 KCNJ11Q14654 390 aa4.8□□□□□ -1.64
SPG11-208ENST00000558155 TERF2Q15554 542 aa4.8□□□□□ -1.64
SPG11-208ENST00000558155 HYAL4Q2M3T9 481 aa4.8□□□□□ -1.64
SPG11-208ENST00000558155 BBS9Q3SYG4 887 aa4.8□□□□□ -1.64
SPG11-208ENST00000558155 DEFB134Q4QY38 66 aa4.8□□□□□ -1.64
SPG11-208ENST00000558155 XKR6Q5GH73 641 aa4.8□□□□□ -1.64
SPG11-208ENST00000558155 CTSL3PQ5NE16 218 aa4.8□□□□□ -1.64
SPG11-208ENST00000558155 Q5PR19 223 aa4.8□□□□□ -1.64
SPG11-208ENST00000558155 OPN5Q6U736 354 aa4.8□□□□□ -1.64
SPG11-208ENST00000558155 C16orf47Q6ZP98 133 aaPredicted RBP4.8□□□□□ -1.64
SPG11-208ENST00000558155 RTL4Q6ZR62 310 aa4.8□□□□□ -1.64
SPG11-208ENST00000558155 FAM47EQ6ZV65 393 aa4.8□□□□□ -1.64
SPG11-208ENST00000558155 LUZP1Q86V48 1076 aa4.8□□□□□ -1.64
SPG11-208ENST00000558155 CXorf67Q86X51 503 aaPredicted RBP4.8□□□□□ -1.64
SPG11-208ENST00000558155 KRTAP1-3Q8IUG1 177 aa4.8□□□□□ -1.64
SPG11-208ENST00000558155 PALM2Q8IXS6 379 aa4.8□□□□□ -1.64
SPG11-208ENST00000558155 CNPY4Q8N129 248 aa4.8□□□□□ -1.64
SPG11-208ENST00000558155 CIARTQ8N365 385 aaPredicted RBP4.8□□□□□ -1.64
SPG11-208ENST00000558155 TMEM132CQ8N3T6 1108 aa4.8□□□□□ -1.64
SPG11-208ENST00000558155 GOLM1Q8NBJ4 401 aa4.8□□□□□ -1.64
SPG11-208ENST00000558155 APCDD1LQ8NCL9 501 aa4.8□□□□□ -1.64
SPG11-208ENST00000558155 OR5L2Q8NGL0 311 aa4.8□□□□□ -1.64
SPG11-208ENST00000558155 NCLNQ969V3 563 aa4.8□□□□□ -1.64
SPG11-208ENST00000558155 ALKBH8Q96BT7 664 aaKnown RBP4.8□□□□□ -1.64
SPG11-208ENST00000558155 FAM136AQ96C01 138 aa4.8□□□□□ -1.64
SPG11-208ENST00000558155 Q96MF0 132 aa4.8□□□□□ -1.64
SPG11-208ENST00000558155 DACH2Q96NX9 599 aa4.8□□□□□ -1.64
SPG11-208ENST00000558155 SH3GL2Q99962 352 aa4.8□□□□□ -1.64
SPG11-208ENST00000558155 CNPPD1Q9BV87 410 aa4.8□□□□□ -1.64
SPG11-208ENST00000558155 RHBGQ9H310 441 aa4.8□□□□□ -1.64
SPG11-208ENST00000558155 EPB41L4BQ9H329 900 aa4.8□□□□□ -1.64
SPG11-208ENST00000558155 NECTIN3Q9NQS3 549 aa4.8□□□□□ -1.64
SPG11-208ENST00000558155 PNO1Q9NRX1 252 aaKnown RBP4.8□□□□□ -1.64
SPG11-208ENST00000558155 TREX1Q9NSU2 369 aa4.8□□□□□ -1.64
SPG11-208ENST00000558155 SACM1LQ9NTJ5 587 aa4.8□□□□□ -1.64
SPG11-208ENST00000558155 ABHD10Q9NUJ1 306 aa4.8□□□□□ -1.64
SPG11-208ENST00000558155 BFARQ9NZS9 450 aa4.8□□□□□ -1.64
SPG11-208ENST00000558155 MYOTQ9UBF9 498 aa4.8□□□□□ -1.64
SPG11-208ENST00000558155 TRPS1Q9UHF7 1281 aa4.8□□□□□ -1.64
SPG11-208ENST00000558155 PPIEQ9UNP9 301 aaKnown RBP4.8□□□□□ -1.64
SPG11-208ENST00000558155 EIF3LQ9Y262 564 aaKnown RBP4.8□□□□□ -1.64
SPG11-208ENST00000558155 MMACHCQ9Y4U1 282 aa4.8□□□□□ -1.64
SPG11-208ENST00000558155 PCDHA13Q9Y5I0 950 aa4.8□□□□□ -1.64
SPG11-208ENST00000558155 LIPGQ9Y5X9 500 aa4.8□□□□□ -1.64
SPG11-208ENST00000558155 FLNAP21333 2647 aaKnown RBP4.8□□□□□ -1.64
SPG11-208ENST00000558155 CHD3Q12873 2000 aaKnown RBP4.8□□□□□ -1.64
SPG11-208ENST00000558155 IGKV3D-11A0A0A0MRZ8 115 aa4.79□□□□□ -1.64
SPG11-208ENST00000558155 SYNDIG1LA6NDD5 238 aa4.79□□□□□ -1.64
SPG11-208ENST00000558155 G3V3Y1 287 aa4.79□□□□□ -1.64
SPG11-208ENST00000558155 WWP2O00308 870 aa4.79□□□□□ -1.64
SPG11-208ENST00000558155 NDUFS4O43181 175 aa4.79□□□□□ -1.64
SPG11-208ENST00000558155 CBFA2T2O43439 604 aa4.79□□□□□ -1.64
SPG11-208ENST00000558155 CRLF1O75462 422 aa4.79□□□□□ -1.64
SPG11-208ENST00000558155 OR6B1O95007 311 aa4.79□□□□□ -1.64
SPG11-208ENST00000558155 IFNB1P01574 187 aa4.79□□□□□ -1.64
SPG11-208ENST00000558155 HRGP04196 525 aa4.79□□□□□ -1.64
SPG11-208ENST00000558155 APRTP07741 180 aa4.79□□□□□ -1.64
SPG11-208ENST00000558155 HIST1H2AGP0C0S8 130 aaPredicted RBP4.79□□□□□ -1.64
SPG11-208ENST00000558155 ZNF888P0CJ79 500 aaPredicted RBP4.79□□□□□ -1.64
SPG11-208ENST00000558155 NPPBP16860 134 aa4.79□□□□□ -1.64
SPG11-208ENST00000558155 HIST1H2ADP20671 130 aa4.79□□□□□ -1.64
SPG11-208ENST00000558155 FPR1P21462 350 aa4.79□□□□□ -1.64
SPG11-208ENST00000558155 CTSSP25774 331 aa4.79□□□□□ -1.64
SPG11-208ENST00000558155 NMBRP28336 390 aa4.79□□□□□ -1.64
SPG11-208ENST00000558155 IMPA1P29218 277 aa4.79□□□□□ -1.64
SPG11-208ENST00000558155 OPRM1P35372 400 aa4.79□□□□□ -1.64
SPG11-208ENST00000558155 COILP38432 576 aaPredicted RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms