RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 BPIFB3P59826 476 aa2.65□□□□□ -1.99
SPG11-206ENST00000558093 ABCE1P61221 599 aaKnown RBP2.65□□□□□ -1.99
SPG11-206ENST00000558093 ROR1Q01973 937 aa2.65□□□□□ -1.99
SPG11-206ENST00000558093 SIX1Q15475 284 aaPredicted RBP2.65□□□□□ -1.99
SPG11-206ENST00000558093 ZKSCAN8Q15776 578 aaPredicted RBP2.65□□□□□ -1.99
SPG11-206ENST00000558093 ECSCRQ19T08 205 aa2.65□□□□□ -1.99
SPG11-206ENST00000558093 TXNRD3NBQ6F5E7 133 aa2.65□□□□□ -1.99
SPG11-206ENST00000558093 SLFN11Q7Z7L1 901 aa2.65□□□□□ -1.99
SPG11-206ENST00000558093 MARCH9Q86YJ5 346 aa2.65□□□□□ -1.99
SPG11-206ENST00000558093 C4orf32Q8N8J7 132 aa2.65□□□□□ -1.99
SPG11-206ENST00000558093 RTL3Q8N8U3 475 aaKnown RBP2.65□□□□□ -1.99
SPG11-206ENST00000558093 OR4Q3Q8NH05 313 aa2.65□□□□□ -1.99
SPG11-206ENST00000558093 SNX21Q969T3 373 aa2.65□□□□□ -1.99
SPG11-206ENST00000558093 EXOC4Q96A65 974 aa2.65□□□□□ -1.99
SPG11-206ENST00000558093 BSCL2Q96G97 398 aaPredicted RBP2.65□□□□□ -1.99
SPG11-206ENST00000558093 RADILQ96JH8 1075 aa2.65□□□□□ -1.99
SPG11-206ENST00000558093 C1orf147Q96MC9 270 aaPredicted RBP2.65□□□□□ -1.99
SPG11-206ENST00000558093 ZMAT2Q96NC0 199 aaKnown RBP2.65□□□□□ -1.99
SPG11-206ENST00000558093 TAAR6Q96RI8 345 aa2.65□□□□□ -1.99
SPG11-206ENST00000558093 ABCG4Q9H172 646 aa2.65□□□□□ -1.99
SPG11-206ENST00000558093 UBQLN3Q9H347 655 aa2.65□□□□□ -1.99
SPG11-206ENST00000558093 UBE2TQ9NPD8 197 aaPredicted RBP2.65□□□□□ -1.99
SPG11-206ENST00000558093 NOCTQ9UK39 431 aaKnown RBP2.65□□□□□ -1.99
SPG11-206ENST00000558093 ATRXP46100 2492 aa2.65□□□□□ -1.99
SPG11-206ENST00000558093 CROCCQ5TZA2 2017 aa2.64□□□□□ -1.99
SPG11-206ENST00000558093 HTR3EA5X5Y0 456 aa2.64□□□□□ -1.99
SPG11-206ENST00000558093 TRIM64A6NGJ6 449 aa2.64□□□□□ -1.99
SPG11-206ENST00000558093 TRIM64BA6NI03 449 aa2.64□□□□□ -1.99
SPG11-206ENST00000558093 A8MU76 341 aa2.64□□□□□ -1.99
SPG11-206ENST00000558093 E9PAM4 449 aa2.64□□□□□ -1.99
SPG11-206ENST00000558093 PHOX2AO14813 284 aa2.64□□□□□ -1.99
SPG11-206ENST00000558093 DNAH10OSP0CZ25 163 aa2.64□□□□□ -1.99
SPG11-206ENST00000558093 ADRA2CP18825 462 aa2.64□□□□□ -1.99
SPG11-206ENST00000558093 BCL3P20749 454 aa2.64□□□□□ -1.99
SPG11-206ENST00000558093 KRTAP5-9P26371 169 aa2.64□□□□□ -1.99
SPG11-206ENST00000558093 PSMB4P28070 264 aa2.64□□□□□ -1.99
SPG11-206ENST00000558093 RPL9P32969 192 aaKnown RBP2.64□□□□□ -1.99
SPG11-206ENST00000558093 GMPSP49915 693 aaPredicted RBP2.64□□□□□ -1.99
SPG11-206ENST00000558093 CRYBA2P53672 197 aa2.64□□□□□ -1.99
SPG11-206ENST00000558093 NAGLUP54802 743 aa2.64□□□□□ -1.99
SPG11-206ENST00000558093 HSD17B7P56937 341 aa2.64□□□□□ -1.99
SPG11-206ENST00000558093 PTENP60484 403 aa2.64□□□□□ -1.99
SPG11-206ENST00000558093 MAP2K1Q02750 393 aaPredicted RBP2.64□□□□□ -1.99
SPG11-206ENST00000558093 CNTN1Q12860 1018 aa2.64□□□□□ -1.99
SPG11-206ENST00000558093 IFT88Q13099 833 aa2.64□□□□□ -1.99
SPG11-206ENST00000558093 CDO1Q16878 200 aa2.64□□□□□ -1.99
SPG11-206ENST00000558093 KNOP1Q1ED39 458 aaKnown RBP2.64□□□□□ -1.99
SPG11-206ENST00000558093 ARMCX4Q5H9R4 360 aa2.64□□□□□ -1.99
SPG11-206ENST00000558093 SLC10A5Q5PT55 438 aa2.64□□□□□ -1.99
SPG11-206ENST00000558093 AGAP7PQ5VUJ5 663 aa2.64□□□□□ -1.99
SPG11-206ENST00000558093 SLC27A4Q6P1M0 643 aa2.64□□□□□ -1.99
SPG11-206ENST00000558093 REG3GQ6UW15 175 aa2.64□□□□□ -1.99
SPG11-206ENST00000558093 TMEM182Q6ZP80 229 aaPredicted RBP2.64□□□□□ -1.99
SPG11-206ENST00000558093 C17orf107Q6ZR85 190 aa2.64□□□□□ -1.99
SPG11-206ENST00000558093 CCDC73Q6ZRK6 1079 aa2.64□□□□□ -1.99
SPG11-206ENST00000558093 CARM1Q86X55 608 aa2.64□□□□□ -1.99
SPG11-206ENST00000558093 ZC3H3Q8IXZ2 948 aaKnown RBP2.64□□□□□ -1.99
SPG11-206ENST00000558093 C4orf19Q8IY42 314 aa2.64□□□□□ -1.99
SPG11-206ENST00000558093 FGFRL1Q8N441 504 aa2.64□□□□□ -1.99
SPG11-206ENST00000558093 CARNMT1Q8N4J0 409 aa2.64□□□□□ -1.99
SPG11-206ENST00000558093 TYMSOSQ8TAI1 123 aa2.64□□□□□ -1.99
SPG11-206ENST00000558093 SSC4DQ8WTU2 575 aa2.64□□□□□ -1.99
SPG11-206ENST00000558093 N4BP2L2Q92802 583 aaPredicted RBP2.64□□□□□ -1.99
SPG11-206ENST00000558093 RIT1Q92963 219 aa2.64□□□□□ -1.99
SPG11-206ENST00000558093 ANKRD27Q96NW4 1050 aa2.64□□□□□ -1.99
SPG11-206ENST00000558093 CCDC28BQ9BUN5 200 aa2.64□□□□□ -1.99
SPG11-206ENST00000558093 MTIF3Q9H2K0 278 aaKnown RBP2.64□□□□□ -1.99
SPG11-206ENST00000558093 DBNDD1Q9H9R9 158 aa2.64□□□□□ -1.99
SPG11-206ENST00000558093 WDR41Q9HAD4 459 aa2.64□□□□□ -1.99
SPG11-206ENST00000558093 LMAN1LQ9HAT1 526 aa2.64□□□□□ -1.99
SPG11-206ENST00000558093 ZCCHC17Q9NP64 241 aaKnown RBP2.64□□□□□ -1.99
SPG11-206ENST00000558093 CHCHD3Q9NX63 227 aaKnown RBP2.64□□□□□ -1.99
SPG11-206ENST00000558093 DCAF16Q9NXF7 216 aa2.64□□□□□ -1.99
SPG11-206ENST00000558093 ZNF107Q9UII5 783 aaPredicted RBP2.64□□□□□ -1.99
SPG11-206ENST00000558093 MGAT4AQ9UM21 535 aa2.64□□□□□ -1.99
SPG11-206ENST00000558093 KLK4Q9Y5K2 254 aa2.64□□□□□ -1.99
SPG11-206ENST00000558093 IKBKGQ9Y6K9 419 aa2.64□□□□□ -1.99
SPG11-206ENST00000558093 UNC13AQ9UPW8 1703 aa2.63□□□□□ -1.99
SPG11-206ENST00000558093 SERINC4A6NH21 518 aa2.63□□□□□ -1.99
SPG11-206ENST00000558093 TMCO5BA8MYB1 307 aa2.63□□□□□ -1.99
SPG11-206ENST00000558093 MLNRO43193 412 aa2.63□□□□□ -1.99
SPG11-206ENST00000558093 ZNF354AO60765 605 aaPredicted RBP2.63□□□□□ -1.99
SPG11-206ENST00000558093 MT-ND1P03886 318 aa2.63□□□□□ -1.99
SPG11-206ENST00000558093 FAM58BPP0C7Q3 252 aa2.63□□□□□ -1.99
SPG11-206ENST00000558093 HPDP32754 393 aaPredicted RBP2.63□□□□□ -1.99
SPG11-206ENST00000558093 EVCP57679 992 aa2.63□□□□□ -1.99
SPG11-206ENST00000558093 RPP38P78345 283 aaKnown RBP2.63□□□□□ -1.99
SPG11-206ENST00000558093 CETN1Q12798 172 aa2.63□□□□□ -1.99
SPG11-206ENST00000558093 ABRQ12979 859 aa2.63□□□□□ -1.99
SPG11-206ENST00000558093 SMC1AQ14683 1233 aaKnown RBP2.63□□□□□ -1.99
SPG11-206ENST00000558093 SLMAPQ14BN4 828 aa2.63□□□□□ -1.99
SPG11-206ENST00000558093 RFTN2Q52LD8 501 aaPredicted RBP2.63□□□□□ -1.99
SPG11-206ENST00000558093 PARP10Q53GL7 1025 aa2.63□□□□□ -1.99
SPG11-206ENST00000558093 MUC21Q5SSG8 566 aa2.63□□□□□ -1.99
SPG11-206ENST00000558093 KLHL10Q6JEL2 608 aa2.63□□□□□ -1.99
SPG11-206ENST00000558093 C16orf87Q6PH81 154 aa2.63□□□□□ -1.99
SPG11-206ENST00000558093 VITQ6UXI7 678 aa2.63□□□□□ -1.99
SPG11-206ENST00000558093 UNC5DQ6UXZ4 953 aa2.63□□□□□ -1.99
SPG11-206ENST00000558093 RFPL4BQ6ZWI9 263 aa2.63□□□□□ -1.99
SPG11-206ENST00000558093 MEX3DQ86XN8 651 aaKnown RBP2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms