RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 ARL13AQ5H913 290 aaPredicted RBP24.13■■□□□ 1.45
SMAD6-202ENST00000557916 OR4C11Q6IEV9 310 aa24.13■■□□□ 1.45
SMAD6-202ENST00000557916 ZNF793Q6ZN11 406 aa24.13■■□□□ 1.45
SMAD6-202ENST00000557916 CA13Q8N1Q1 262 aa24.13■■□□□ 1.45
SMAD6-202ENST00000557916 ADAMTS17Q8TE56 1095 aa24.13■■□□□ 1.45
SMAD6-202ENST00000557916 HBEGFQ99075 208 aa24.13■■□□□ 1.45
SMAD6-202ENST00000557916 SORBS1Q9BX66 1292 aaKnown RBP24.13■■□□□ 1.45
SMAD6-202ENST00000557916 EML4Q9HC35 981 aaKnown RBP24.13■■□□□ 1.45
SMAD6-202ENST00000557916 CHRNGP07510 517 aa24.12■■□□□ 1.45
SMAD6-202ENST00000557916 NEFHP12036 1026 aa24.12■■□□□ 1.45
SMAD6-202ENST00000557916 RNH1P13489 461 aaKnown RBP24.12■■□□□ 1.45
SMAD6-202ENST00000557916 IL10P22301 178 aa24.12■■□□□ 1.45
SMAD6-202ENST00000557916 HIST1H1TP22492 207 aaPredicted RBP24.12■■□□□ 1.45
SMAD6-202ENST00000557916 TSFMP43897 325 aaKnown RBP24.12■■□□□ 1.45
SMAD6-202ENST00000557916 HTR6P50406 440 aa24.12■■□□□ 1.45
SMAD6-202ENST00000557916 WDR4P57081 412 aaKnown RBP24.12■■□□□ 1.45
SMAD6-202ENST00000557916 GALNT1Q10472 559 aaPredicted RBP24.12■■□□□ 1.45
SMAD6-202ENST00000557916 CHI3L2Q15782 390 aa24.12■■□□□ 1.45
SMAD6-202ENST00000557916 GPR155Q7Z3F1 870 aa24.12■■□□□ 1.45
SMAD6-202ENST00000557916 RAB43Q86YS6 212 aa24.12■■□□□ 1.45
SMAD6-202ENST00000557916 ACOT4Q8N9L9 421 aa24.12■■□□□ 1.45
SMAD6-202ENST00000557916 TBC1D20Q96BZ9 403 aa24.12■■□□□ 1.45
SMAD6-202ENST00000557916 OR1F2PQ96R84 312 aa24.12■■□□□ 1.45
SMAD6-202ENST00000557916 RBCK1Q9BYM8 510 aa24.12■■□□□ 1.45
SMAD6-202ENST00000557916 SEMA3GQ9NS98 782 aa24.12■■□□□ 1.45
SMAD6-202ENST00000557916 C3orf18Q9UK00 162 aa24.12■■□□□ 1.45
SMAD6-202ENST00000557916 MKL2Q9ULH7 1088 aa24.12■■□□□ 1.45
SMAD6-202ENST00000557916 SLC12A4Q9UP95 1085 aa24.12■■□□□ 1.45
SMAD6-202ENST00000557916 CCDC88CQ9P219 2028 aa24.12■■□□□ 1.45
SMAD6-202ENST00000557916 HMGB1P1B2RPK0 211 aaPredicted RBP24.11■■□□□ 1.45
SMAD6-202ENST00000557916 IDSB3KWA1 339 aa24.11■■□□□ 1.45
SMAD6-202ENST00000557916 PSMD12O00232 456 aaPredicted RBP24.11■■□□□ 1.45
SMAD6-202ENST00000557916 SEMA3DO95025 777 aa24.11■■□□□ 1.45
SMAD6-202ENST00000557916 SERPINE1P05121 402 aa24.11■■□□□ 1.45
SMAD6-202ENST00000557916 HEXBP07686 556 aa24.11■■□□□ 1.45
SMAD6-202ENST00000557916 UROSP10746 265 aa24.11■■□□□ 1.45
SMAD6-202ENST00000557916 HSD3B1P14060 373 aa24.11■■□□□ 1.45
SMAD6-202ENST00000557916 HSD3B2P26439 372 aa24.11■■□□□ 1.45
SMAD6-202ENST00000557916 SERPINB3P29508 390 aa24.11■■□□□ 1.45
SMAD6-202ENST00000557916 EMP2P54851 167 aa24.11■■□□□ 1.45
SMAD6-202ENST00000557916 ZNF33BQ06732 778 aa24.11■■□□□ 1.45
SMAD6-202ENST00000557916 ABRAXAS2Q15018 415 aa24.11■■□□□ 1.45
SMAD6-202ENST00000557916 MFSD4BQ5TF39 518 aa24.11■■□□□ 1.45
SMAD6-202ENST00000557916 NMRK1Q9NWW6 199 aa24.11■■□□□ 1.45
SMAD6-202ENST00000557916 AZIN1O14977 448 aa24.1■■□□□ 1.45
SMAD6-202ENST00000557916 SCELO95171 688 aa24.1■■□□□ 1.45
SMAD6-202ENST00000557916 IGHEP01854 428 aa24.1■■□□□ 1.45
SMAD6-202ENST00000557916 FHP07954 510 aa24.1■■□□□ 1.45
SMAD6-202ENST00000557916 BGNP21810 368 aa24.1■■□□□ 1.45
SMAD6-202ENST00000557916 MMP11P24347 488 aa24.1■■□□□ 1.45
SMAD6-202ENST00000557916 BSGP35613 385 aa24.1■■□□□ 1.45
SMAD6-202ENST00000557916 CSTF3Q12996 717 aaKnown RBP24.1■■□□□ 1.45
SMAD6-202ENST00000557916 MINDY4Q4G0A6 757 aa24.1■■□□□ 1.45
SMAD6-202ENST00000557916 CLEC6AQ6EIG7 209 aa24.1■■□□□ 1.45
SMAD6-202ENST00000557916 GBP7Q8N8V2 638 aaPredicted RBP24.1■■□□□ 1.45
SMAD6-202ENST00000557916 THAP4Q8WY91 577 aa24.1■■□□□ 1.45
SMAD6-202ENST00000557916 CATSPER2Q96P56 530 aa24.1■■□□□ 1.45
SMAD6-202ENST00000557916 AHSPQ9NZD4 102 aa24.1■■□□□ 1.45
SMAD6-202ENST00000557916 POLHQ9Y253 713 aa24.1■■□□□ 1.45
SMAD6-202ENST00000557916 ITPR1Q14643 2758 aa24.1■■□□□ 1.45
SMAD6-202ENST00000557916 CDC123O75794 336 aaPredicted RBP24.1■■□□□ 1.45
SMAD6-202ENST00000557916 ARRB2P32121 409 aa24.1■■□□□ 1.45
SMAD6-202ENST00000557916 LIM2P55344 173 aa24.1■■□□□ 1.45
SMAD6-202ENST00000557916 RAB38P57729 211 aa24.1■■□□□ 1.45
SMAD6-202ENST00000557916 DEFB109BQ30KR1 87 aa24.1■■□□□ 1.45
SMAD6-202ENST00000557916 CES4AQ5XG92 561 aa24.1■■□□□ 1.45
SMAD6-202ENST00000557916 SCIMPQ6UWF3 145 aa24.1■■□□□ 1.45
SMAD6-202ENST00000557916 PPP1R32Q7Z5V6 425 aa24.1■■□□□ 1.45
SMAD6-202ENST00000557916 NACC2Q96BF6 587 aa24.1■■□□□ 1.45
SMAD6-202ENST00000557916 ZNF717Q9BY31 904 aaPredicted RBP24.1■■□□□ 1.45
SMAD6-202ENST00000557916 MRPL1Q9BYD6 325 aaKnown RBP24.1■■□□□ 1.45
SMAD6-202ENST00000557916 VN1R1Q9GZP7 353 aa24.1■■□□□ 1.45
SMAD6-202ENST00000557916 LANCL2Q9NS86 450 aa24.1■■□□□ 1.45
SMAD6-202ENST00000557916 VPS29Q9UBQ0 182 aa24.1■■□□□ 1.45
SMAD6-202ENST00000557916 DAPP1Q9UN19 280 aa24.1■■□□□ 1.45
SMAD6-202ENST00000557916 FIS1Q9Y3D6 152 aa24.1■■□□□ 1.45
SMAD6-202ENST00000557916 SERTM1A2A2V5 107 aa24.09■■□□□ 1.45
SMAD6-202ENST00000557916 TMEM114B3SHH9 223 aa24.09■■□□□ 1.45
SMAD6-202ENST00000557916 FAM227AF5H4B4 570 aa24.09■■□□□ 1.45
SMAD6-202ENST00000557916 FGF4P08620 206 aa24.09■■□□□ 1.45
SMAD6-202ENST00000557916 JAK1P23458 1154 aa24.09■■□□□ 1.45
SMAD6-202ENST00000557916 GRK2P25098 689 aa24.09■■□□□ 1.45
SMAD6-202ENST00000557916 TUBB8Q3ZCM7 444 aa24.09■■□□□ 1.45
SMAD6-202ENST00000557916 ATG14Q6ZNE5 492 aa24.09■■□□□ 1.45
SMAD6-202ENST00000557916 MRGPREQ86SM8 312 aa24.09■■□□□ 1.45
SMAD6-202ENST00000557916 NUDT13Q86X67 352 aa24.09■■□□□ 1.45
SMAD6-202ENST00000557916 ZCCHC7Q8N3Z6 543 aaKnown RBP24.09■■□□□ 1.45
SMAD6-202ENST00000557916 IP6K3Q96PC2 410 aa24.09■■□□□ 1.45
SMAD6-202ENST00000557916 ACPTQ9BZG2 426 aa24.09■■□□□ 1.45
SMAD6-202ENST00000557916 DDX31Q9H8H2 851 aaKnown RBP24.09■■□□□ 1.45
SMAD6-202ENST00000557916 LYRM4Q9HD34 91 aa24.09■■□□□ 1.45
SMAD6-202ENST00000557916 TRAF6Q9Y4K3 522 aa24.09■■□□□ 1.45
SMAD6-202ENST00000557916 OR2W5A6NFC9 320 aa24.08■■□□□ 1.44
SMAD6-202ENST00000557916 B4GALT2O60909 372 aa24.08■■□□□ 1.44
SMAD6-202ENST00000557916 EEDO75530 441 aaKnown RBP24.08■■□□□ 1.44
SMAD6-202ENST00000557916 CHN1P15882 459 aa24.08■■□□□ 1.44
SMAD6-202ENST00000557916 SLAMF1Q13291 335 aa24.08■■□□□ 1.44
SMAD6-202ENST00000557916 SH2D4BQ5SQS7 431 aa24.08■■□□□ 1.44
SMAD6-202ENST00000557916 KANK2Q63ZY3 851 aa24.08■■□□□ 1.44
SMAD6-202ENST00000557916 FAAH2Q6GMR7 532 aa24.08■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms