RNA–Protein interactions for RNA: ENST00000557764.5

TRAPPC6B-207, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 2

Gene TRAPPC6B, Length 870 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-207ENST00000557764 CPA2P48052 419 aa13.19□□□□□ -0.3
TRAPPC6B-207ENST00000557764 GPR143P51810 404 aa13.19□□□□□ -0.3
TRAPPC6B-207ENST00000557764 EIF3EP60228 445 aaKnown RBP13.19□□□□□ -0.3
TRAPPC6B-207ENST00000557764 PRAMEP78395 509 aa13.19□□□□□ -0.3
TRAPPC6B-207ENST00000557764 TERF2Q15554 542 aa13.19□□□□□ -0.3
TRAPPC6B-207ENST00000557764 WIPI1Q5MNZ9 446 aaPredicted RBP13.19□□□□□ -0.3
TRAPPC6B-207ENST00000557764 RNF187Q5TA31 235 aaPredicted RBP13.19□□□□□ -0.3
TRAPPC6B-207ENST00000557764 NSUN5P2Q63ZY6 315 aa13.19□□□□□ -0.3
TRAPPC6B-207ENST00000557764 SASS6Q6UVJ0 657 aa13.19□□□□□ -0.3
TRAPPC6B-207ENST00000557764 LUZP2Q86TE4 346 aa13.19□□□□□ -0.3
TRAPPC6B-207ENST00000557764 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.19□□□□□ -0.3
TRAPPC6B-207ENST00000557764 LRRC56Q8IYG6 542 aaPredicted RBP13.19□□□□□ -0.3
TRAPPC6B-207ENST00000557764 RCOR2Q8IZ40 523 aa13.19□□□□□ -0.3
TRAPPC6B-207ENST00000557764 GOLM1Q8NBJ4 401 aa13.19□□□□□ -0.3
TRAPPC6B-207ENST00000557764 ZNF740Q8NDX6 193 aa13.19□□□□□ -0.3
TRAPPC6B-207ENST00000557764 ACTL9Q8TC94 416 aa13.19□□□□□ -0.3
TRAPPC6B-207ENST00000557764 FAM136AQ96C01 138 aa13.19□□□□□ -0.3
TRAPPC6B-207ENST00000557764 PDLIM2Q96JY6 352 aa13.19□□□□□ -0.3
TRAPPC6B-207ENST00000557764 SGCZQ96LD1 299 aa13.19□□□□□ -0.3
TRAPPC6B-207ENST00000557764 PANX2Q96RD6 677 aa13.19□□□□□ -0.3
TRAPPC6B-207ENST00000557764 RHBGQ9H310 441 aa13.19□□□□□ -0.3
TRAPPC6B-207ENST00000557764 ZNF703Q9H7S9 590 aaPredicted RBP13.19□□□□□ -0.3
TRAPPC6B-207ENST00000557764 CATSPERZQ9NTU4 200 aa13.19□□□□□ -0.3
TRAPPC6B-207ENST00000557764 PPIEQ9UNP9 301 aaKnown RBP13.19□□□□□ -0.3
TRAPPC6B-207ENST00000557764 TESMINQ9Y4I5 508 aa13.19□□□□□ -0.3
TRAPPC6B-207ENST00000557764 C15orf38-AP3S2A0A0A6YYH1 394 aa13.18□□□□□ -0.3
TRAPPC6B-207ENST00000557764 A0A1B0GTH6 734 aa13.18□□□□□ -0.3
TRAPPC6B-207ENST00000557764 MACROD2A1Z1Q3 448 aa13.18□□□□□ -0.3
TRAPPC6B-207ENST00000557764 CTIFO43310 598 aaKnown RBP13.18□□□□□ -0.3
TRAPPC6B-207ENST00000557764 PSTPIP1O43586 416 aa13.18□□□□□ -0.3
TRAPPC6B-207ENST00000557764 SYF2O95926 243 aaKnown RBP13.18□□□□□ -0.3
TRAPPC6B-207ENST00000557764 PAX1P15863 534 aa13.18□□□□□ -0.3
TRAPPC6B-207ENST00000557764 ALOX12P18054 663 aa13.18□□□□□ -0.3
TRAPPC6B-207ENST00000557764 ATP5DP30049 168 aa13.18□□□□□ -0.3
TRAPPC6B-207ENST00000557764 TTPAP49638 278 aa13.18□□□□□ -0.3
TRAPPC6B-207ENST00000557764 ZBED6P86452 979 aa13.18□□□□□ -0.3
TRAPPC6B-207ENST00000557764 GBX1Q14549 363 aa13.18□□□□□ -0.3
TRAPPC6B-207ENST00000557764 SLC18A3Q16572 532 aa13.18□□□□□ -0.3
TRAPPC6B-207ENST00000557764 STX1AQ16623 288 aa13.18□□□□□ -0.3
TRAPPC6B-207ENST00000557764 PARP6Q2NL67 630 aa13.18□□□□□ -0.3
TRAPPC6B-207ENST00000557764 OR52K1Q8NGK4 314 aa13.18□□□□□ -0.3
TRAPPC6B-207ENST00000557764 WNT2BQ93097 391 aa13.18□□□□□ -0.3
TRAPPC6B-207ENST00000557764 TRIB1Q96RU8 372 aa13.18□□□□□ -0.3
TRAPPC6B-207ENST00000557764 ACKR4Q9NPB9 350 aa13.18□□□□□ -0.3
TRAPPC6B-207ENST00000557764 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.18□□□□□ -0.3
TRAPPC6B-207ENST00000557764 PSMD12O00232 456 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC6B-207ENST00000557764 CD3EAPO15446 510 aaKnown RBP13.17□□□□□ -0.3
TRAPPC6B-207ENST00000557764 SPRY1O43609 319 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC6B-207ENST00000557764 PPP2R1BP30154 601 aa13.17□□□□□ -0.3
TRAPPC6B-207ENST00000557764 HK2P52789 917 aa13.17□□□□□ -0.3
TRAPPC6B-207ENST00000557764 EIF3BP55884 814 aaKnown RBP13.17□□□□□ -0.3
TRAPPC6B-207ENST00000557764 ATP5J2P56134 94 aa13.17□□□□□ -0.3
TRAPPC6B-207ENST00000557764 SKP1P63208 163 aa13.17□□□□□ -0.3
TRAPPC6B-207ENST00000557764 SRSF2Q01130 221 aaKnown RBP13.17□□□□□ -0.3
TRAPPC6B-207ENST00000557764 ACVR1Q04771 509 aa13.17□□□□□ -0.3
TRAPPC6B-207ENST00000557764 CRYZQ08257 329 aaKnown RBP13.17□□□□□ -0.3
TRAPPC6B-207ENST00000557764 VEZF1Q14119 521 aa13.17□□□□□ -0.3
TRAPPC6B-207ENST00000557764 KCNJ11Q14654 390 aa13.17□□□□□ -0.3
TRAPPC6B-207ENST00000557764 NR1I3Q14994 352 aa13.17□□□□□ -0.3
TRAPPC6B-207ENST00000557764 KLHL38Q2WGJ6 581 aa13.17□□□□□ -0.3
TRAPPC6B-207ENST00000557764 ACSBG2Q5FVE4 666 aa13.17□□□□□ -0.3
TRAPPC6B-207ENST00000557764 CTSL3PQ5NE16 218 aa13.17□□□□□ -0.3
TRAPPC6B-207ENST00000557764 RBM43Q6ZSC3 357 aaKnown RBP13.17□□□□□ -0.3
TRAPPC6B-207ENST00000557764 PLEKHM3Q6ZWE6 761 aa13.17□□□□□ -0.3
TRAPPC6B-207ENST00000557764 LRRC6Q86X45 466 aa13.17□□□□□ -0.3
TRAPPC6B-207ENST00000557764 RHOT2Q8IXI1 618 aa13.17□□□□□ -0.3
TRAPPC6B-207ENST00000557764 KATNAL2Q8IYT4 538 aa13.17□□□□□ -0.3
TRAPPC6B-207ENST00000557764 TIMP4Q99727 224 aa13.17□□□□□ -0.3
TRAPPC6B-207ENST00000557764 ANP32EQ9BTT0 268 aa13.17□□□□□ -0.3
TRAPPC6B-207ENST00000557764 REG4Q9BYZ8 158 aa13.17□□□□□ -0.3
TRAPPC6B-207ENST00000557764 FAM129AQ9BZQ8 928 aa13.17□□□□□ -0.3
TRAPPC6B-207ENST00000557764 SH2B3Q9UQQ2 575 aa13.17□□□□□ -0.3
TRAPPC6B-207ENST00000557764 MBD3L3A6NE82 208 aaPredicted RBP13.16□□□□□ -0.3
TRAPPC6B-207ENST00000557764 CD8B2A6NJW9 211 aa13.16□□□□□ -0.3
TRAPPC6B-207ENST00000557764 A8MV72 311 aaPredicted RBP13.16□□□□□ -0.3
TRAPPC6B-207ENST00000557764 NDUFS4O43181 175 aa13.16□□□□□ -0.3
TRAPPC6B-207ENST00000557764 CEP104O60308 925 aa13.16□□□□□ -0.3
TRAPPC6B-207ENST00000557764 ZNF354AO60765 605 aaPredicted RBP13.16□□□□□ -0.3
TRAPPC6B-207ENST00000557764 NIPSNAP2O75323 286 aa13.16□□□□□ -0.3
TRAPPC6B-207ENST00000557764 AVILO75366 819 aa13.16□□□□□ -0.3
TRAPPC6B-207ENST00000557764 NDUFS3O75489 264 aa13.16□□□□□ -0.3
TRAPPC6B-207ENST00000557764 ZNF888P0CJ79 500 aaPredicted RBP13.16□□□□□ -0.3
TRAPPC6B-207ENST00000557764 TMIGD3P0DMS9 266 aaPredicted RBP13.16□□□□□ -0.3
TRAPPC6B-207ENST00000557764 RNH1P13489 461 aaKnown RBP13.16□□□□□ -0.3
TRAPPC6B-207ENST00000557764 RPS3P23396 243 aaKnown RBP eCLIP13.16□□□□□ -0.3
TRAPPC6B-207ENST00000557764 MARCKSL1P49006 195 aa13.16□□□□□ -0.3
TRAPPC6B-207ENST00000557764 FOXF2Q12947 444 aa13.16□□□□□ -0.3
TRAPPC6B-207ENST00000557764 DUSP8Q13202 625 aa13.16□□□□□ -0.3
TRAPPC6B-207ENST00000557764 SF3B4Q15427 424 aaKnown RBP eCLIP13.16□□□□□ -0.3
TRAPPC6B-207ENST00000557764 CLEC12BQ2HXU8 276 aa13.16□□□□□ -0.3
TRAPPC6B-207ENST00000557764 HSDL2Q6YN16 418 aa13.16□□□□□ -0.3
TRAPPC6B-207ENST00000557764 PM20D2Q8IYS1 436 aa13.16□□□□□ -0.3
TRAPPC6B-207ENST00000557764 RASGEF1CQ8N431 466 aa13.16□□□□□ -0.3
TRAPPC6B-207ENST00000557764 MFSD9Q8NBP5 474 aa13.16□□□□□ -0.3
TRAPPC6B-207ENST00000557764 MBD3L2Q8NHZ7 208 aaPredicted RBP13.16□□□□□ -0.3
TRAPPC6B-207ENST00000557764 TMEM171Q8WVE6 324 aa13.16□□□□□ -0.3
TRAPPC6B-207ENST00000557764 IGFBPL1Q8WX77 278 aa13.16□□□□□ -0.3
TRAPPC6B-207ENST00000557764 SLC30A3Q99726 388 aa13.16□□□□□ -0.3
TRAPPC6B-207ENST00000557764 PIGQQ9BRB3 760 aa13.16□□□□□ -0.3
TRAPPC6B-207ENST00000557764 ZFP64Q9NPA5 681 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms