RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 SYNDIG1LA6NDD5 238 aa13.67□□□□□ -0.22
SHMT2-235ENST00000557740 EIF3HO15372 352 aaKnown RBP eCLIP13.67□□□□□ -0.22
SHMT2-235ENST00000557740 CLEC3AO75596 197 aa13.67□□□□□ -0.22
SHMT2-235ENST00000557740 STK16O75716 305 aa13.67□□□□□ -0.22
SHMT2-235ENST00000557740 STMN1P16949 149 aa13.67□□□□□ -0.22
SHMT2-235ENST00000557740 GRNP28799 593 aaKnown RBP13.67□□□□□ -0.22
SHMT2-235ENST00000557740 SSTR1P30872 391 aa13.67□□□□□ -0.22
SHMT2-235ENST00000557740 GP5P40197 560 aa13.67□□□□□ -0.22
SHMT2-235ENST00000557740 HSPA7P48741 367 aa13.67□□□□□ -0.22
SHMT2-235ENST00000557740 HSD17B7P56937 341 aa13.67□□□□□ -0.22
SHMT2-235ENST00000557740 ATP6V0D1P61421 351 aa13.67□□□□□ -0.22
SHMT2-235ENST00000557740 TGM3Q08188 693 aa13.67□□□□□ -0.22
SHMT2-235ENST00000557740 RUNX2Q13950 521 aa13.67□□□□□ -0.22
SHMT2-235ENST00000557740 RCN2Q14257 317 aa13.67□□□□□ -0.22
SHMT2-235ENST00000557740 FBXO48Q5FWF7 155 aa13.67□□□□□ -0.22
SHMT2-235ENST00000557740 XKR6Q5GH73 641 aa13.67□□□□□ -0.22
SHMT2-235ENST00000557740 CDKL4Q5MAI5 379 aa13.67□□□□□ -0.22
SHMT2-235ENST00000557740 SULT1C3Q6IMI6 304 aa13.67□□□□□ -0.22
SHMT2-235ENST00000557740 XKRXQ6PP77 449 aa13.67□□□□□ -0.22
SHMT2-235ENST00000557740 Q6ZPB1 254 aaPredicted RBP13.67□□□□□ -0.22
SHMT2-235ENST00000557740 MAATS1Q7Z4T9 603 aa13.67□□□□□ -0.22
SHMT2-235ENST00000557740 MCEMP1Q8IX19 187 aa13.67□□□□□ -0.22
SHMT2-235ENST00000557740 CPSF7Q8N684 471 aaKnown RBP13.67□□□□□ -0.22
SHMT2-235ENST00000557740 APCDD1LQ8NCL9 501 aa13.67□□□□□ -0.22
SHMT2-235ENST00000557740 OR2L5Q8NG80 312 aa13.67□□□□□ -0.22
SHMT2-235ENST00000557740 EXT2Q93063 718 aa13.67□□□□□ -0.22
SHMT2-235ENST00000557740 PTCD3Q96EY7 689 aaKnown RBP13.67□□□□□ -0.22
SHMT2-235ENST00000557740 VMP1Q96GC9 406 aa13.67□□□□□ -0.22
SHMT2-235ENST00000557740 GPR22Q99680 433 aa13.67□□□□□ -0.22
SHMT2-235ENST00000557740 RBBP8Q99708 897 aa13.67□□□□□ -0.22
SHMT2-235ENST00000557740 CCDC77Q9BR77 488 aa13.67□□□□□ -0.22
SHMT2-235ENST00000557740 ERP44Q9BS26 406 aa13.67□□□□□ -0.22
SHMT2-235ENST00000557740 EFCAB11Q9BUY7 163 aa13.67□□□□□ -0.22
SHMT2-235ENST00000557740 NT5DC2Q9H857 520 aa13.67□□□□□ -0.22
SHMT2-235ENST00000557740 TRIM45Q9H8W5 580 aaPredicted RBP13.67□□□□□ -0.22
SHMT2-235ENST00000557740 ZNF835Q9Y2P0 537 aa13.67□□□□□ -0.22
SHMT2-235ENST00000557740 TCRBV9S1A1TA0A576 114 aa13.66□□□□□ -0.22
SHMT2-235ENST00000557740 CXorf49A8MYA2 514 aaPredicted RBP13.66□□□□□ -0.22
SHMT2-235ENST00000557740 TFECO14948 347 aaPredicted RBP13.66□□□□□ -0.22
SHMT2-235ENST00000557740 TAPBPO15533 448 aa13.66□□□□□ -0.22
SHMT2-235ENST00000557740 ASNA1O43681 348 aa13.66□□□□□ -0.22
SHMT2-235ENST00000557740 WISP3O95389 354 aaPredicted RBP13.66□□□□□ -0.22
SHMT2-235ENST00000557740 PRF1P14222 555 aa13.66□□□□□ -0.22
SHMT2-235ENST00000557740 COX6B1P14854 86 aa13.66□□□□□ -0.22
SHMT2-235ENST00000557740 CD1DP15813 335 aa13.66□□□□□ -0.22
SHMT2-235ENST00000557740 CERS1P27544 350 aa13.66□□□□□ -0.22
SHMT2-235ENST00000557740 GGT5P36269 586 aa13.66□□□□□ -0.22
SHMT2-235ENST00000557740 MTTPP55157 894 aa13.66□□□□□ -0.22
SHMT2-235ENST00000557740 ADORA2A-AS1P86434 159 aa13.66□□□□□ -0.22
SHMT2-235ENST00000557740 CBLBQ13191 982 aa13.66□□□□□ -0.22
SHMT2-235ENST00000557740 ZNF630Q2M218 657 aaPredicted RBP13.66□□□□□ -0.22
SHMT2-235ENST00000557740 PAGE2BQ5JRK9 111 aa13.66□□□□□ -0.22
SHMT2-235ENST00000557740 CLNKQ7Z7G1 428 aa13.66□□□□□ -0.22
SHMT2-235ENST00000557740 CTAGE3PQ8IX95 158 aa13.66□□□□□ -0.22
SHMT2-235ENST00000557740 ZNF595Q8IYB9 648 aa13.66□□□□□ -0.22
SHMT2-235ENST00000557740 CYP4Z2PQ8N1L4 340 aa13.66□□□□□ -0.22
SHMT2-235ENST00000557740 ARMC10Q8N2F6 343 aa13.66□□□□□ -0.22
SHMT2-235ENST00000557740 TMEM156Q8N614 296 aa13.66□□□□□ -0.22
SHMT2-235ENST00000557740 POGLUT1Q8NBL1 392 aa13.66□□□□□ -0.22
SHMT2-235ENST00000557740 NCLNQ969V3 563 aa13.66□□□□□ -0.22
SHMT2-235ENST00000557740 QRFPRQ96P65 431 aa13.66□□□□□ -0.22
SHMT2-235ENST00000557740 SERINC2Q96SA4 455 aa13.66□□□□□ -0.22
SHMT2-235ENST00000557740 ADAP2Q9NPF8 381 aa13.66□□□□□ -0.22
SHMT2-235ENST00000557740 RNF112Q9ULX5 631 aa13.66□□□□□ -0.22
SHMT2-235ENST00000557740 PYCARDQ9ULZ3 195 aa13.66□□□□□ -0.22
SHMT2-235ENST00000557740 MEMO1Q9Y316 297 aa13.66□□□□□ -0.22
SHMT2-235ENST00000557740 LRBAP50851 2863 aa13.65□□□□□ -0.22
SHMT2-235ENST00000557740 FAM159BA6NKW6 160 aa13.65□□□□□ -0.22
SHMT2-235ENST00000557740 KLRC4-KLRK1H3BQV0 150 aa13.65□□□□□ -0.22
SHMT2-235ENST00000557740 RAD51CO43502 376 aa13.65□□□□□ -0.22
SHMT2-235ENST00000557740 CCNT2O60583 730 aaKnown RBP13.65□□□□□ -0.22
SHMT2-235ENST00000557740 ITGA10O75578 1167 aa13.65□□□□□ -0.22
SHMT2-235ENST00000557740 IFNA16P05015 189 aa13.65□□□□□ -0.22
SHMT2-235ENST00000557740 GSTA2P09210 222 aa13.65□□□□□ -0.22
SHMT2-235ENST00000557740 AGAP20933 346 aa13.65□□□□□ -0.22
SHMT2-235ENST00000557740 PPP2R1BP30154 601 aa13.65□□□□□ -0.22
SHMT2-235ENST00000557740 MEOX1P50221 254 aa13.65□□□□□ -0.22
SHMT2-235ENST00000557740 SSR4P51571 173 aa13.65□□□□□ -0.22
SHMT2-235ENST00000557740 RAB10P61026 200 aa13.65□□□□□ -0.22
SHMT2-235ENST00000557740 HSF1Q00613 529 aa13.65□□□□□ -0.22
SHMT2-235ENST00000557740 C2orf54Q08AI8 447 aa13.65□□□□□ -0.22
SHMT2-235ENST00000557740 LAPTM5Q13571 262 aa13.65□□□□□ -0.22
SHMT2-235ENST00000557740 DOC2AQ14183 400 aa13.65□□□□□ -0.22
SHMT2-235ENST00000557740 SLMAPQ14BN4 828 aa13.65□□□□□ -0.22
SHMT2-235ENST00000557740 OR4D1Q15615 310 aa13.65□□□□□ -0.22
SHMT2-235ENST00000557740 HIST2H2ACQ16777 129 aaPredicted RBP13.65□□□□□ -0.22
SHMT2-235ENST00000557740 ADPRMQ3LIE5 342 aa13.65□□□□□ -0.22
SHMT2-235ENST00000557740 HIST2H2AA3Q6FI13 130 aa13.65□□□□□ -0.22
SHMT2-235ENST00000557740 ABHD17CQ6PCB6 329 aa13.65□□□□□ -0.22
SHMT2-235ENST00000557740 VN1R5Q7Z5H4 357 aa13.65□□□□□ -0.22
SHMT2-235ENST00000557740 ZNF227Q86WZ6 799 aa13.65□□□□□ -0.22
SHMT2-235ENST00000557740 EID3Q8N140 333 aa13.65□□□□□ -0.22
SHMT2-235ENST00000557740 PDPRQ8NCN5 879 aa13.65□□□□□ -0.22
SHMT2-235ENST00000557740 AGAP11Q8TF27 550 aa13.65□□□□□ -0.22
SHMT2-235ENST00000557740 ESAMQ96AP7 390 aa13.65□□□□□ -0.22
SHMT2-235ENST00000557740 ROGDIQ9GZN7 287 aa13.65□□□□□ -0.22
SHMT2-235ENST00000557740 TGFBR3LH3BV60 316 aa13.64□□□□□ -0.23
SHMT2-235ENST00000557740 PRRG2O14669 202 aa13.64□□□□□ -0.23
SHMT2-235ENST00000557740 FANCGO15287 622 aa13.64□□□□□ -0.23
SHMT2-235ENST00000557740 SNRPB2P08579 225 aaKnown RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms