RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 CFAP36Q96G28 342 aa14.85□□□□□ -0.03
SCFD1-224ENST00000557713 FAR2Q96K12 515 aa14.85□□□□□ -0.03
SCFD1-224ENST00000557713 QRFPRQ96P65 431 aa14.85□□□□□ -0.03
SCFD1-224ENST00000557713 PRTFDC1Q9NRG1 225 aa14.85□□□□□ -0.03
SCFD1-224ENST00000557713 CHMP2BQ9UQN3 213 aa14.85□□□□□ -0.03
SCFD1-224ENST00000557713 YARS2Q9Y2Z4 477 aaKnown RBP14.85□□□□□ -0.03
SCFD1-224ENST00000557713 OARD1Q9Y530 152 aa14.85□□□□□ -0.03
SCFD1-224ENST00000557713 PSAT1Q9Y617 370 aa14.85□□□□□ -0.03
SCFD1-224ENST00000557713 CACNA1CQ13936 2221 aa14.85□□□□□ -0.03
SCFD1-224ENST00000557713 A0A0G2JN53 185 aa14.84□□□□□ -0.03
SCFD1-224ENST00000557713 CDC40O60508 579 aaKnown RBP eCLIP14.84□□□□□ -0.03
SCFD1-224ENST00000557713 H2AFYO75367 372 aaKnown RBP14.84□□□□□ -0.03
SCFD1-224ENST00000557713 TBX6O95947 436 aaPredicted RBP14.84□□□□□ -0.03
SCFD1-224ENST00000557713 GNAZP19086 355 aa14.84□□□□□ -0.03
SCFD1-224ENST00000557713 GDF5P43026 501 aa14.84□□□□□ -0.03
SCFD1-224ENST00000557713 SLC6A12P48065 614 aa14.84□□□□□ -0.03
SCFD1-224ENST00000557713 SSR4P51571 173 aa14.84□□□□□ -0.03
SCFD1-224ENST00000557713 RAB38P57729 211 aa14.84□□□□□ -0.03
SCFD1-224ENST00000557713 C18orf21Q32NC0 220 aaPredicted RBP14.84□□□□□ -0.03
SCFD1-224ENST00000557713 ARHGAP11AQ6P4F7 1023 aa14.84□□□□□ -0.03
SCFD1-224ENST00000557713 TMIGD1Q6UXZ0 262 aa14.84□□□□□ -0.03
SCFD1-224ENST00000557713 SPNS3Q6ZMD2 512 aa14.84□□□□□ -0.03
SCFD1-224ENST00000557713 C16orf47Q6ZP98 133 aaPredicted RBP14.84□□□□□ -0.03
SCFD1-224ENST00000557713 CDH24Q86UP0 819 aa14.84□□□□□ -0.03
SCFD1-224ENST00000557713 ZC3HC1Q86WB0 502 aaKnown RBP14.84□□□□□ -0.03
SCFD1-224ENST00000557713 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.84□□□□□ -0.03
SCFD1-224ENST00000557713 LILRB4Q8NHJ6 448 aa14.84□□□□□ -0.03
SCFD1-224ENST00000557713 ANKRD49Q8WVL7 239 aa14.84□□□□□ -0.03
SCFD1-224ENST00000557713 ASB5Q8WWX0 329 aa14.84□□□□□ -0.03
SCFD1-224ENST00000557713 LRRC39Q96DD0 335 aa14.84□□□□□ -0.03
SCFD1-224ENST00000557713 TP63Q9H3D4 680 aaPredicted RBP14.84□□□□□ -0.03
SCFD1-224ENST00000557713 NT5DC2Q9H857 520 aa14.84□□□□□ -0.03
SCFD1-224ENST00000557713 TIMMDC1Q9NPL8 285 aa14.84□□□□□ -0.03
SCFD1-224ENST00000557713 DEPPQ9NTK1 212 aa14.84□□□□□ -0.03
SCFD1-224ENST00000557713 KCMF1Q9P0J7 381 aa14.84□□□□□ -0.03
SCFD1-224ENST00000557713 SNX12Q9UMY4 172 aa14.84□□□□□ -0.03
SCFD1-224ENST00000557713 RNF6Q9Y252 685 aa14.84□□□□□ -0.03
SCFD1-224ENST00000557713 CLDN4O14493 209 aa14.83□□□□□ -0.04
SCFD1-224ENST00000557713 ERI3O43414 337 aaKnown RBP14.83□□□□□ -0.04
SCFD1-224ENST00000557713 ZFAND5O76080 213 aa14.83□□□□□ -0.04
SCFD1-224ENST00000557713 PDE9AO76083 593 aa14.83□□□□□ -0.04
SCFD1-224ENST00000557713 SAT1P21673 171 aa14.83□□□□□ -0.04
SCFD1-224ENST00000557713 TAS2R39P59534 338 aa14.83□□□□□ -0.04
SCFD1-224ENST00000557713 TFF3Q07654 80 aa14.83□□□□□ -0.04
SCFD1-224ENST00000557713 ZNF460Q14592 562 aa14.83□□□□□ -0.04
SCFD1-224ENST00000557713 MORF4L2Q15014 288 aa14.83□□□□□ -0.04
SCFD1-224ENST00000557713 ADPRMQ3LIE5 342 aa14.83□□□□□ -0.04
SCFD1-224ENST00000557713 XKR6Q5GH73 641 aa14.83□□□□□ -0.04
SCFD1-224ENST00000557713 GPALPP1Q8IXQ4 340 aa14.83□□□□□ -0.04
SCFD1-224ENST00000557713 ZNF595Q8IYB9 648 aa14.83□□□□□ -0.04
SCFD1-224ENST00000557713 PSD4Q8NDX1 1056 aa14.83□□□□□ -0.04
SCFD1-224ENST00000557713 TTLQ8NG68 377 aa14.83□□□□□ -0.04
SCFD1-224ENST00000557713 RHBDF1Q96CC6 855 aa14.83□□□□□ -0.04
SCFD1-224ENST00000557713 SEC16BQ96JE7 1060 aa14.83□□□□□ -0.04
SCFD1-224ENST00000557713 EGFL8Q99944 293 aa14.83□□□□□ -0.04
SCFD1-224ENST00000557713 CCDC77Q9BR77 488 aa14.83□□□□□ -0.04
SCFD1-224ENST00000557713 DEFB127Q9H1M4 99 aa14.83□□□□□ -0.04
SCFD1-224ENST00000557713 LIN28AQ9H9Z2 209 aaKnown RBP14.83□□□□□ -0.04
SCFD1-224ENST00000557713 ADAP2Q9NPF8 381 aa14.83□□□□□ -0.04
SCFD1-224ENST00000557713 NPDC1Q9NQX5 325 aaPredicted RBP14.83□□□□□ -0.04
SCFD1-224ENST00000557713 CCDC168Q8NDH2 2452 aa14.82□□□□□ -0.04
SCFD1-224ENST00000557713 FAM95CA0A1B0GW59 222 aa14.82□□□□□ -0.04
SCFD1-224ENST00000557713 PINLYPA6NC86 204 aa14.82□□□□□ -0.04
SCFD1-224ENST00000557713 USP27XA6NNY8 438 aa14.82□□□□□ -0.04
SCFD1-224ENST00000557713 CYR61O00622 381 aa14.82□□□□□ -0.04
SCFD1-224ENST00000557713 FANCGO15287 622 aa14.82□□□□□ -0.04
SCFD1-224ENST00000557713 B3GALT2O43825 422 aa14.82□□□□□ -0.04
SCFD1-224ENST00000557713 CLEC3AO75596 197 aa14.82□□□□□ -0.04
SCFD1-224ENST00000557713 OR2J2O76002 312 aa14.82□□□□□ -0.04
SCFD1-224ENST00000557713 TOXO94900 526 aa14.82□□□□□ -0.04
SCFD1-224ENST00000557713 WDR47O94967 919 aa14.82□□□□□ -0.04
SCFD1-224ENST00000557713 TUBB4AP04350 444 aa14.82□□□□□ -0.04
SCFD1-224ENST00000557713 GSTM2P28161 218 aa14.82□□□□□ -0.04
SCFD1-224ENST00000557713 CHRNB4P30926 498 aa14.82□□□□□ -0.04
SCFD1-224ENST00000557713 MGAT5Q09328 741 aa14.82□□□□□ -0.04
SCFD1-224ENST00000557713 SLC13A2Q13183 592 aa14.82□□□□□ -0.04
SCFD1-224ENST00000557713 SLBPQ14493 270 aaKnown RBP eCLIP14.82□□□□□ -0.04
SCFD1-224ENST00000557713 TSNQ15631 228 aaKnown RBP14.82□□□□□ -0.04
SCFD1-224ENST00000557713 VN1R5Q7Z5H4 357 aa14.82□□□□□ -0.04
SCFD1-224ENST00000557713 TMEM132CQ8N3T6 1108 aa14.82□□□□□ -0.04
SCFD1-224ENST00000557713 RPRMLQ8N4K4 120 aa14.82□□□□□ -0.04
SCFD1-224ENST00000557713 OR2L5Q8NG80 312 aa14.82□□□□□ -0.04
SCFD1-224ENST00000557713 RND1Q92730 232 aa14.82□□□□□ -0.04
SCFD1-224ENST00000557713 MCMBPQ9BTE3 642 aa14.82□□□□□ -0.04
SCFD1-224ENST00000557713 CAPS2Q9BXY5 557 aa14.82□□□□□ -0.04
SCFD1-224ENST00000557713 UCK2Q9BZX2 261 aa14.82□□□□□ -0.04
SCFD1-224ENST00000557713 PITHD1Q9GZP4 211 aaPredicted RBP14.82□□□□□ -0.04
SCFD1-224ENST00000557713 MOCS1Q9NZB8 636 aa14.82□□□□□ -0.04
SCFD1-224ENST00000557713 MYOTQ9UBF9 498 aa14.82□□□□□ -0.04
SCFD1-224ENST00000557713 CTNNAL1Q9UBT7 734 aa14.82□□□□□ -0.04
SCFD1-224ENST00000557713 ZNF490Q9ULM2 529 aaPredicted RBP14.82□□□□□ -0.04
SCFD1-224ENST00000557713 ERVK-11Q9UQG0 969 aa14.82□□□□□ -0.04
SCFD1-224ENST00000557713 NKX2-6A6NCS4 301 aa14.81□□□□□ -0.04
SCFD1-224ENST00000557713 A8MVJ9 347 aa14.81□□□□□ -0.04
SCFD1-224ENST00000557713 TAPBPO15533 448 aa14.81□□□□□ -0.04
SCFD1-224ENST00000557713 PRAMEF4O60810 478 aa14.81□□□□□ -0.04
SCFD1-224ENST00000557713 CTNSO60931 367 aa14.81□□□□□ -0.04
SCFD1-224ENST00000557713 OR6B1O95007 311 aa14.81□□□□□ -0.04
SCFD1-224ENST00000557713 PLA2G16P53816 162 aa14.81□□□□□ -0.04
SCFD1-224ENST00000557713 LIM2P55344 173 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms