RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 OR7G3Q8NG95 312 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 OR56B2PQ8NGI1 322 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 OR10Z1Q8NGY1 313 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 METTL21AQ8WXB1 218 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 AZIN2Q96A70 460 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 NXNL1Q96CM4 212 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 ALG14Q96F25 216 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 ALS2CR12Q96Q35 445 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 FERMT1Q9BQL6 677 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 OVOL2Q9BRP0 275 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 ATG101Q9BSB4 218 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 ZMYND12Q9H0C1 365 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 STMN4Q9H169 189 aaPredicted RBP1.53□□□□□ -2.16
HIF1A-212ENST00000557538 SNX25Q9H3E2 840 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 TPK1Q9H3S4 243 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 PSTPIP2Q9H939 334 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 TRPC7Q9HCX4 862 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 ZNF71Q9NQZ8 489 aaPredicted RBP1.53□□□□□ -2.16
HIF1A-212ENST00000557538 DNAJC17Q9NVM6 304 aaKnown RBP1.53□□□□□ -2.16
HIF1A-212ENST00000557538 NMRK1Q9NWW6 199 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 RNF186Q9NXI6 227 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 ATPIF1Q9UII2 106 aa1.53□□□□□ -2.16
HIF1A-212ENST00000557538 BAZ1AQ9NRL2 1556 aaPredicted RBP1.53□□□□□ -2.17
HIF1A-212ENST00000557538 BCL9O00512 1426 aa1.53□□□□□ -2.17
HIF1A-212ENST00000557538 ARPC4-TTLL3A0A0A6YYG9 625 aa1.53□□□□□ -2.17
HIF1A-212ENST00000557538 IQANK1A0A1B0GTG1 560 aa1.53□□□□□ -2.17
HIF1A-212ENST00000557538 RGSL1A5PLK6 1076 aa1.53□□□□□ -2.17
HIF1A-212ENST00000557538 FAM149AA5PLN7 773 aa1.53□□□□□ -2.17
HIF1A-212ENST00000557538 KRTAP29-1A8MX34 341 aaPredicted RBP1.53□□□□□ -2.17
HIF1A-212ENST00000557538 SMIM1B2RUZ4 78 aa1.53□□□□□ -2.17
HIF1A-212ENST00000557538 PRR23D1E9PI22 279 aaPredicted RBP1.53□□□□□ -2.17
HIF1A-212ENST00000557538 POLR2DO15514 142 aaKnown RBP1.53□□□□□ -2.17
HIF1A-212ENST00000557538 CLDN3O15551 220 aa1.53□□□□□ -2.17
HIF1A-212ENST00000557538 AP5Z1O43299 807 aa1.53□□□□□ -2.17
HIF1A-212ENST00000557538 SCO2O43819 266 aa1.53□□□□□ -2.17
HIF1A-212ENST00000557538 EXTL3O43909 919 aa1.53□□□□□ -2.17
HIF1A-212ENST00000557538 PRPSAP2O60256 369 aa1.53□□□□□ -2.17
HIF1A-212ENST00000557538 MOCS2O96007 188 aaPredicted RBP1.53□□□□□ -2.17
HIF1A-212ENST00000557538 YES1P07947 543 aa1.53□□□□□ -2.17
HIF1A-212ENST00000557538 SP1P08047 785 aa1.53□□□□□ -2.17
HIF1A-212ENST00000557538 VIMP08670 466 aaKnown RBP1.53□□□□□ -2.17
HIF1A-212ENST00000557538 CCDC166P0CW27 439 aa1.53□□□□□ -2.17
HIF1A-212ENST00000557538 PRR23D2P0DMB1 279 aaPredicted RBP1.53□□□□□ -2.17
HIF1A-212ENST00000557538 PRKACBP22694 351 aa1.53□□□□□ -2.17
HIF1A-212ENST00000557538 CD27P26842 260 aa1.53□□□□□ -2.17
HIF1A-212ENST00000557538 PTGER3P43115 390 aa1.53□□□□□ -2.17
HIF1A-212ENST00000557538 MNAT1P51948 309 aa1.53□□□□□ -2.17
HIF1A-212ENST00000557538 NDST2P52849 883 aa1.53□□□□□ -2.17
HIF1A-212ENST00000557538 GSTO1P78417 241 aa1.53□□□□□ -2.17
HIF1A-212ENST00000557538 KDSRQ06136 332 aa1.53□□□□□ -2.17
HIF1A-212ENST00000557538 NCBP1Q09161 790 aaKnown RBP1.53□□□□□ -2.17
HIF1A-212ENST00000557538 SMARCB1Q12824 385 aa1.53□□□□□ -2.17
HIF1A-212ENST00000557538 CAMK2DQ13557 499 aa1.53□□□□□ -2.17
HIF1A-212ENST00000557538 CUL2Q13617 745 aa1.53□□□□□ -2.17
HIF1A-212ENST00000557538 GIT2Q14161 759 aa1.53□□□□□ -2.17
HIF1A-212ENST00000557538 STXBP2Q15833 593 aa1.53□□□□□ -2.17
HIF1A-212ENST00000557538 SGCAQ16586 387 aa1.53□□□□□ -2.17
HIF1A-212ENST00000557538 GLRA4Q5JXX5 417 aa1.53□□□□□ -2.17
HIF1A-212ENST00000557538 DUPD1Q68J44 220 aa1.53□□□□□ -2.17
HIF1A-212ENST00000557538 ZCCHC12Q6PEW1 402 aa1.53□□□□□ -2.17
HIF1A-212ENST00000557538 NOTCH2NLQ7Z3S9 236 aa1.53□□□□□ -2.17
HIF1A-212ENST00000557538 HOOK3Q86VS8 718 aa1.53□□□□□ -2.17
HIF1A-212ENST00000557538 CDH26Q8IXH8 852 aa1.53□□□□□ -2.17
HIF1A-212ENST00000557538 PHC2Q8IXK0 858 aa1.53□□□□□ -2.17
HIF1A-212ENST00000557538 KLHDC8AQ8IYD2 350 aa1.53□□□□□ -2.17
HIF1A-212ENST00000557538 LRRC34Q8IZ02 419 aa1.53□□□□□ -2.17
HIF1A-212ENST00000557538 LPCAT1Q8NF37 534 aa1.53□□□□□ -2.17
HIF1A-212ENST00000557538 SLC24A4Q8NFF2 622 aa1.53□□□□□ -2.17
HIF1A-212ENST00000557538 OR9A1PQ8NGU1 263 aa1.53□□□□□ -2.17
HIF1A-212ENST00000557538 CTCFLQ8NI51 663 aaPredicted RBP1.53□□□□□ -2.17
HIF1A-212ENST00000557538 SLC26A7Q8TE54 656 aa1.53□□□□□ -2.17
HIF1A-212ENST00000557538 PDLIM5Q96HC4 596 aaKnown RBP1.53□□□□□ -2.17
HIF1A-212ENST00000557538 OPALINQ96PE5 141 aa1.53□□□□□ -2.17
HIF1A-212ENST00000557538 RASL10BQ96S79 203 aa1.53□□□□□ -2.17
HIF1A-212ENST00000557538 RBM4Q9BWF3 364 aaKnown RBP1.53□□□□□ -2.17
HIF1A-212ENST00000557538 GCOM2Q9BZD3 368 aaPredicted RBP1.53□□□□□ -2.17
HIF1A-212ENST00000557538 NTN4Q9HB63 628 aa1.53□□□□□ -2.17
HIF1A-212ENST00000557538 MRM3Q9HC36 420 aaKnown RBP1.53□□□□□ -2.17
HIF1A-212ENST00000557538 MRPL17Q9NRX2 175 aaKnown RBP1.53□□□□□ -2.17
HIF1A-212ENST00000557538 SENP1Q9P0U3 644 aa1.53□□□□□ -2.17
HIF1A-212ENST00000557538 TXNDC16Q9P2K2 825 aa1.53□□□□□ -2.17
HIF1A-212ENST00000557538 CIDEBQ9UHD4 219 aa1.53□□□□□ -2.17
HIF1A-212ENST00000557538 DDX19BQ9UMR2 479 aa1.53□□□□□ -2.17
HIF1A-212ENST00000557538 A0A0U1RQV5 110 aa1.52□□□□□ -2.17
HIF1A-212ENST00000557538 KPNA7A9QM74 516 aa1.52□□□□□ -2.17
HIF1A-212ENST00000557538 F8VVB4 439 aa1.52□□□□□ -2.17
HIF1A-212ENST00000557538 F8VWA3 439 aa1.52□□□□□ -2.17
HIF1A-212ENST00000557538 BIRC5O15392 142 aa1.52□□□□□ -2.17
HIF1A-212ENST00000557538 RIPK2O43353 540 aa1.52□□□□□ -2.17
HIF1A-212ENST00000557538 ATP8B1O43520 1251 aa1.52□□□□□ -2.17
HIF1A-212ENST00000557538 SULT1B1O43704 296 aa1.52□□□□□ -2.17
HIF1A-212ENST00000557538 IDH3BO43837 385 aa1.52□□□□□ -2.17
HIF1A-212ENST00000557538 SELENOFO60613 162 aa1.52□□□□□ -2.17
HIF1A-212ENST00000557538 IGLV2-11P01706 119 aa1.52□□□□□ -2.17
HIF1A-212ENST00000557538 RNF224P0DH78 156 aa1.52□□□□□ -2.17
HIF1A-212ENST00000557538 PRKAR1AP10644 381 aa1.52□□□□□ -2.17
HIF1A-212ENST00000557538 ACP2P11117 423 aa1.52□□□□□ -2.17
HIF1A-212ENST00000557538 CETPP11597 493 aa1.52□□□□□ -2.17
HIF1A-212ENST00000557538 ANPEPP15144 967 aa1.52□□□□□ -2.17
HIF1A-212ENST00000557538 CBR1P16152 277 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms