RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 SGPP1Q9BX95 441 aa8.12□□□□□ -1.11
VRK1-206ENST00000557222 PARVBQ9HBI1 364 aa8.12□□□□□ -1.11
VRK1-206ENST00000557222 XAB2Q9HCS7 855 aaKnown RBP8.12□□□□□ -1.11
VRK1-206ENST00000557222 KLHL1Q9NR64 748 aa8.12□□□□□ -1.11
VRK1-206ENST00000557222 COQ3Q9NZJ6 369 aa8.12□□□□□ -1.11
VRK1-206ENST00000557222 CRIM1Q9NZV1 1036 aa8.12□□□□□ -1.11
VRK1-206ENST00000557222 HCN3Q9P1Z3 774 aa8.12□□□□□ -1.11
VRK1-206ENST00000557222 NPIPA1Q9UND3 350 aa8.12□□□□□ -1.11
VRK1-206ENST00000557222 NAALAD2Q9Y3Q0 740 aa8.12□□□□□ -1.11
VRK1-206ENST00000557222 ASB1Q9Y576 335 aa8.12□□□□□ -1.11
VRK1-206ENST00000557222 INTS1Q8N201 2190 aaKnown RBP8.12□□□□□ -1.11
VRK1-206ENST00000557222 SCN3AQ9NY46 2000 aa8.12□□□□□ -1.11
VRK1-206ENST00000557222 ZCWPW2A0A1B0GU75 182 aa8.11□□□□□ -1.11
VRK1-206ENST00000557222 TCRBV7S3A2A0A539 114 aa8.11□□□□□ -1.11
VRK1-206ENST00000557222 SYNDIG1LA6NDD5 238 aa8.11□□□□□ -1.11
VRK1-206ENST00000557222 KLRC4-KLRK1H3BQV0 150 aa8.11□□□□□ -1.11
VRK1-206ENST00000557222 C19orf84I3L1E1 186 aa8.11□□□□□ -1.11
VRK1-206ENST00000557222 FCHO1O14526 889 aa8.11□□□□□ -1.11
VRK1-206ENST00000557222 ADAM10O14672 748 aa8.11□□□□□ -1.11
VRK1-206ENST00000557222 LCMT2O60294 686 aaKnown RBP8.11□□□□□ -1.11
VRK1-206ENST00000557222 GALR3O60755 368 aaPredicted RBP8.11□□□□□ -1.11
VRK1-206ENST00000557222 RDH16O75452 317 aa8.11□□□□□ -1.11
VRK1-206ENST00000557222 SLC25A12O75746 678 aa8.11□□□□□ -1.11
VRK1-206ENST00000557222 FGGP02679 453 aa8.11□□□□□ -1.11
VRK1-206ENST00000557222 CD1EP15812 388 aa8.11□□□□□ -1.11
VRK1-206ENST00000557222 NPPBP16860 134 aa8.11□□□□□ -1.11
VRK1-206ENST00000557222 ALOX12P18054 663 aa8.11□□□□□ -1.11
VRK1-206ENST00000557222 AHRP35869 848 aa8.11□□□□□ -1.11
VRK1-206ENST00000557222 HLCSP50747 726 aa8.11□□□□□ -1.11
VRK1-206ENST00000557222 CCR8P51685 355 aa8.11□□□□□ -1.11
VRK1-206ENST00000557222 MLF1P58340 268 aa8.11□□□□□ -1.11
VRK1-206ENST00000557222 TBPL1P62380 186 aa8.11□□□□□ -1.11
VRK1-206ENST00000557222 ID3Q02535 119 aa8.11□□□□□ -1.11
VRK1-206ENST00000557222 CUL1Q13616 776 aa8.11□□□□□ -1.11
VRK1-206ENST00000557222 MAPKAPK3Q16644 382 aa8.11□□□□□ -1.11
VRK1-206ENST00000557222 BBS9Q3SYG4 887 aa8.11□□□□□ -1.11
VRK1-206ENST00000557222 DUPD1Q68J44 220 aa8.11□□□□□ -1.11
VRK1-206ENST00000557222 AGTRAPQ6RW13 159 aa8.11□□□□□ -1.11
VRK1-206ENST00000557222 QSOX2Q6ZRP7 698 aa8.11□□□□□ -1.11
VRK1-206ENST00000557222 CAND1Q86VP6 1230 aaKnown RBP8.11□□□□□ -1.11
VRK1-206ENST00000557222 PDSS2Q86YH6 399 aa8.11□□□□□ -1.11
VRK1-206ENST00000557222 KCT2Q8NC54 265 aa8.11□□□□□ -1.11
VRK1-206ENST00000557222 C16orf52Q8NHV5 167 aa8.11□□□□□ -1.11
VRK1-206ENST00000557222 CA5BP1Q8WTZ4 195 aa8.11□□□□□ -1.11
VRK1-206ENST00000557222 ASB5Q8WWX0 329 aa8.11□□□□□ -1.11
VRK1-206ENST00000557222 GPR21Q99679 349 aa8.11□□□□□ -1.11
VRK1-206ENST00000557222 AARSD1Q9BTE6 412 aaKnown RBP8.11□□□□□ -1.11
VRK1-206ENST00000557222 HES7Q9BYE0 225 aa8.11□□□□□ -1.11
VRK1-206ENST00000557222 CDCP1Q9H5V8 836 aa8.11□□□□□ -1.11
VRK1-206ENST00000557222 GUCA1BQ9UMX6 200 aa8.11□□□□□ -1.11
VRK1-206ENST00000557222 PDE10AQ9Y233 779 aa8.11□□□□□ -1.11
VRK1-206ENST00000557222 KLF13Q9Y2Y9 288 aaPredicted RBP8.11□□□□□ -1.11
VRK1-206ENST00000557222 DNAJC13O75165 2243 aa8.1□□□□□ -1.11
VRK1-206ENST00000557222 TRBC2A0A5B9 178 aa8.1□□□□□ -1.11
VRK1-206ENST00000557222 URADA6NGE7 173 aa8.1□□□□□ -1.11
VRK1-206ENST00000557222 SAGE2PA6NJ88 616 aa8.1□□□□□ -1.11
VRK1-206ENST00000557222 CHST10O43529 356 aa8.1□□□□□ -1.11
VRK1-206ENST00000557222 AVILO75366 819 aa8.1□□□□□ -1.11
VRK1-206ENST00000557222 HIST1H2AGP0C0S8 130 aaPredicted RBP8.1□□□□□ -1.11
VRK1-206ENST00000557222 IGFBP2P18065 325 aa8.1□□□□□ -1.11
VRK1-206ENST00000557222 HIST1H2ADP20671 130 aa8.1□□□□□ -1.11
VRK1-206ENST00000557222 TPP2P29144 1249 aaPredicted RBP8.1□□□□□ -1.11
VRK1-206ENST00000557222 PTGS2P35354 604 aa8.1□□□□□ -1.11
VRK1-206ENST00000557222 COILP38432 576 aaPredicted RBP8.1□□□□□ -1.11
VRK1-206ENST00000557222 SLC1A2P43004 574 aa8.1□□□□□ -1.11
VRK1-206ENST00000557222 MAGEA3P43357 314 aa8.1□□□□□ -1.11
VRK1-206ENST00000557222 KCNJ1P48048 391 aa8.1□□□□□ -1.11
VRK1-206ENST00000557222 AP1S2P56377 157 aa8.1□□□□□ -1.11
VRK1-206ENST00000557222 TLE4Q04727 773 aa8.1□□□□□ -1.11
VRK1-206ENST00000557222 RGS1Q08116 209 aa8.1□□□□□ -1.11
VRK1-206ENST00000557222 CTBP1Q13363 440 aa8.1□□□□□ -1.11
VRK1-206ENST00000557222 NAE1Q13564 534 aa8.1□□□□□ -1.11
VRK1-206ENST00000557222 CDSNQ15517 529 aa8.1□□□□□ -1.11
VRK1-206ENST00000557222 TERF2Q15554 542 aa8.1□□□□□ -1.11
VRK1-206ENST00000557222 MEX3BQ6ZN04 569 aaKnown RBP8.1□□□□□ -1.11
VRK1-206ENST00000557222 KIAA0408Q6ZU52 694 aa8.1□□□□□ -1.11
VRK1-206ENST00000557222 ABHD13Q7L211 337 aa8.1□□□□□ -1.11
VRK1-206ENST00000557222 PIWIL4Q7Z3Z4 852 aaKnown RBP8.1□□□□□ -1.11
VRK1-206ENST00000557222 CDH24Q86UP0 819 aa8.1□□□□□ -1.11
VRK1-206ENST00000557222 DENND6AQ8IWF6 608 aa8.1□□□□□ -1.11
VRK1-206ENST00000557222 SULF2Q8IWU5 870 aa8.1□□□□□ -1.11
VRK1-206ENST00000557222 CPNE9Q8IYJ1 553 aa8.1□□□□□ -1.11
VRK1-206ENST00000557222 AMER2Q8N7J2 671 aa8.1□□□□□ -1.11
VRK1-206ENST00000557222 OR56A3Q8NH54 315 aa8.1□□□□□ -1.11
VRK1-206ENST00000557222 LILRB4Q8NHJ6 448 aa8.1□□□□□ -1.11
VRK1-206ENST00000557222 ZCCHC10Q8TBK6 192 aa8.1□□□□□ -1.11
VRK1-206ENST00000557222 FAM57AQ8TBR7 257 aa8.1□□□□□ -1.11
VRK1-206ENST00000557222 NT5CQ8TCD5 201 aa8.1□□□□□ -1.11
VRK1-206ENST00000557222 FBF1Q8TES7 1133 aa8.1□□□□□ -1.11
VRK1-206ENST00000557222 ATL1Q8WXF7 558 aa8.1□□□□□ -1.11
VRK1-206ENST00000557222 ZNF669Q96BR6 464 aaPredicted RBP8.1□□□□□ -1.11
VRK1-206ENST00000557222 PEX11GQ96HA9 241 aa8.1□□□□□ -1.11
VRK1-206ENST00000557222 HIST1H2AHQ96KK5 128 aa8.1□□□□□ -1.11
VRK1-206ENST00000557222 FANCD2OSQ96PS1 177 aa8.1□□□□□ -1.11
VRK1-206ENST00000557222 HIST1H2AJQ99878 128 aa8.1□□□□□ -1.11
VRK1-206ENST00000557222 MACROD1Q9BQ69 325 aa8.1□□□□□ -1.11
VRK1-206ENST00000557222 FAM167BQ9BTA0 163 aa8.1□□□□□ -1.11
VRK1-206ENST00000557222 H2AFJQ9BTM1 129 aa8.1□□□□□ -1.11
VRK1-206ENST00000557222 KRTAP9-2Q9BYQ4 174 aa8.1□□□□□ -1.11
VRK1-206ENST00000557222 FBXO6Q9NRD1 293 aaPredicted RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms