RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 KIAA0408Q6ZU52 694 aa9.34□□□□□ -0.91
HNRNPC-228ENST00000557033 PPP1R32Q7Z5V6 425 aa9.34□□□□□ -0.91
HNRNPC-228ENST00000557033 KCNMB4Q86W47 210 aa9.34□□□□□ -0.91
HNRNPC-228ENST00000557033 NUP43Q8NFH3 380 aa9.34□□□□□ -0.91
HNRNPC-228ENST00000557033 ZNF480Q8WV37 535 aa9.34□□□□□ -0.91
HNRNPC-228ENST00000557033 ZNF566Q969W8 418 aa9.34□□□□□ -0.91
HNRNPC-228ENST00000557033 GPR21Q99679 349 aa9.34□□□□□ -0.91
HNRNPC-228ENST00000557033 PLCD4Q9BRC7 762 aa9.34□□□□□ -0.91
HNRNPC-228ENST00000557033 NUDT9Q9BW91 350 aa9.34□□□□□ -0.91
HNRNPC-228ENST00000557033 DDX47Q9H0S4 455 aaKnown RBP9.34□□□□□ -0.91
HNRNPC-228ENST00000557033 ZNF304Q9HCX3 659 aa9.34□□□□□ -0.91
HNRNPC-228ENST00000557033 MRPS30Q9NP92 439 aaKnown RBP9.34□□□□□ -0.91
HNRNPC-228ENST00000557033 RASSF1Q9NS23 344 aa9.34□□□□□ -0.91
HNRNPC-228ENST00000557033 IARS2Q9NSE4 1012 aaKnown RBP9.34□□□□□ -0.91
HNRNPC-228ENST00000557033 TAS2R13Q9NYV9 303 aa9.34□□□□□ -0.91
HNRNPC-228ENST00000557033 RNF14Q9UBS8 474 aa9.34□□□□□ -0.91
HNRNPC-228ENST00000557033 CDC14AQ9UNH5 594 aa9.34□□□□□ -0.91
HNRNPC-228ENST00000557033 SAR1BQ9Y6B6 198 aa9.34□□□□□ -0.91
HNRNPC-228ENST00000557033 CCDC88CQ9P219 2028 aa9.34□□□□□ -0.91
HNRNPC-228ENST00000557033 LOC105369274A0A096LPK9 316 aa9.33□□□□□ -0.92
HNRNPC-228ENST00000557033 LOC102723532A0A0G2JNH3 316 aa9.33□□□□□ -0.92
HNRNPC-228ENST00000557033 KRT87PA6NCN2 255 aa9.33□□□□□ -0.92
HNRNPC-228ENST00000557033 H0YGG7 62 aa9.33□□□□□ -0.92
HNRNPC-228ENST00000557033 TXNDC9O14530 226 aa9.33□□□□□ -0.92
HNRNPC-228ENST00000557033 SLC16A5O15375 505 aa9.33□□□□□ -0.92
HNRNPC-228ENST00000557033 SYF2O95926 243 aaKnown RBP9.33□□□□□ -0.92
HNRNPC-228ENST00000557033 ALPPP05187 535 aa9.33□□□□□ -0.92
HNRNPC-228ENST00000557033 EIF2S1P05198 315 aaKnown RBP9.33□□□□□ -0.92
HNRNPC-228ENST00000557033 ZGLP1P0C6A0 271 aa9.33□□□□□ -0.92
HNRNPC-228ENST00000557033 ERVK-10P10266 1014 aa9.33□□□□□ -0.92
HNRNPC-228ENST00000557033 PRKCAP17252 672 aa9.33□□□□□ -0.92
HNRNPC-228ENST00000557033 MCM3P25205 808 aa9.33□□□□□ -0.92
HNRNPC-228ENST00000557033 IVDP26440 423 aa9.33□□□□□ -0.92
HNRNPC-228ENST00000557033 THBS2P35442 1172 aa9.33□□□□□ -0.92
HNRNPC-228ENST00000557033 CARSP49589 748 aaKnown RBP9.33□□□□□ -0.92
HNRNPC-228ENST00000557033 RGS4P49798 205 aa9.33□□□□□ -0.92
HNRNPC-228ENST00000557033 MLLT10P55197 1068 aa9.33□□□□□ -0.92
HNRNPC-228ENST00000557033 ARF3P61204 181 aaPredicted RBP9.33□□□□□ -0.92
HNRNPC-228ENST00000557033 GNG11P61952 73 aa9.33□□□□□ -0.92
HNRNPC-228ENST00000557033 YBX1P67809 324 aaKnown RBP9.33□□□□□ -0.92
HNRNPC-228ENST00000557033 OCA2Q04671 838 aa9.33□□□□□ -0.92
HNRNPC-228ENST00000557033 AIMP2Q13155 320 aaKnown RBP9.33□□□□□ -0.92
HNRNPC-228ENST00000557033 CUL1Q13616 776 aa9.33□□□□□ -0.92
HNRNPC-228ENST00000557033 CRYMQ14894 314 aa9.33□□□□□ -0.92
HNRNPC-228ENST00000557033 MORF4L2Q15014 288 aa9.33□□□□□ -0.92
HNRNPC-228ENST00000557033 PRTGQ2VWP7 1150 aa9.33□□□□□ -0.92
HNRNPC-228ENST00000557033 NADK2Q4G0N4 442 aa9.33□□□□□ -0.92
HNRNPC-228ENST00000557033 VWA5B1Q5TIE3 1220 aa9.33□□□□□ -0.92
HNRNPC-228ENST00000557033 GARNL3Q5VVW2 1013 aa9.33□□□□□ -0.92
HNRNPC-228ENST00000557033 ZNF425Q6IV72 752 aa9.33□□□□□ -0.92
HNRNPC-228ENST00000557033 JMJD6Q6NYC1 403 aaPredicted RBP9.33□□□□□ -0.92
HNRNPC-228ENST00000557033 IGFL3Q6UXB1 125 aa9.33□□□□□ -0.92
HNRNPC-228ENST00000557033 GALNT7Q86SF2 657 aa9.33□□□□□ -0.92
HNRNPC-228ENST00000557033 PAQR7Q86WK9 346 aa9.33□□□□□ -0.92
HNRNPC-228ENST00000557033 CNTN4Q8IWV2 1026 aa9.33□□□□□ -0.92
HNRNPC-228ENST00000557033 LRRC56Q8IYG6 542 aaPredicted RBP9.33□□□□□ -0.92
HNRNPC-228ENST00000557033 CPNE9Q8IYJ1 553 aa9.33□□□□□ -0.92
HNRNPC-228ENST00000557033 OR4N4Q8N0Y3 316 aa9.33□□□□□ -0.92
HNRNPC-228ENST00000557033 PDIK1LQ8N165 341 aa9.33□□□□□ -0.92
HNRNPC-228ENST00000557033 GALNT16Q8N428 558 aa9.33□□□□□ -0.92
HNRNPC-228ENST00000557033 CD200R1Q8TD46 325 aa9.33□□□□□ -0.92
HNRNPC-228ENST00000557033 MCOLN3Q8TDD5 553 aa9.33□□□□□ -0.92
HNRNPC-228ENST00000557033 LRRC39Q96DD0 335 aa9.33□□□□□ -0.92
HNRNPC-228ENST00000557033 MRGPRX4Q96LA9 322 aa9.33□□□□□ -0.92
HNRNPC-228ENST00000557033 ACAT2Q9BWD1 397 aa9.33□□□□□ -0.92
HNRNPC-228ENST00000557033 ZNF282Q9UDV7 671 aaPredicted RBP9.33□□□□□ -0.92
HNRNPC-228ENST00000557033 TRMT6Q9UJA5 497 aaKnown RBP9.33□□□□□ -0.92
HNRNPC-228ENST00000557033 TNRC6AQ8NDV7 1962 aaKnown RBP9.33□□□□□ -0.92
HNRNPC-228ENST00000557033 FER1L5A0AVI2 2057 aa9.33□□□□□ -0.92
HNRNPC-228ENST00000557033 MED13Q9UHV7 2174 aa9.33□□□□□ -0.92
HNRNPC-228ENST00000557033 UBR5O95071 2799 aaPredicted RBP9.32□□□□□ -0.92
HNRNPC-228ENST00000557033 ANKRD12Q6UB98 2062 aa9.32□□□□□ -0.92
HNRNPC-228ENST00000557033 IGLV3-12A0A075B6K2 115 aa9.32□□□□□ -0.92
HNRNPC-228ENST00000557033 IGKV1-8A0A0C4DH67 115 aa9.32□□□□□ -0.92
HNRNPC-228ENST00000557033 CCDC188H7C350 402 aa9.32□□□□□ -0.92
HNRNPC-228ENST00000557033 PRPF4O43172 522 aaKnown RBP eCLIP9.32□□□□□ -0.92
HNRNPC-228ENST00000557033 NRP2O60462 931 aa9.32□□□□□ -0.92
HNRNPC-228ENST00000557033 VPS4BO75351 444 aa9.32□□□□□ -0.92
HNRNPC-228ENST00000557033 SORBS2O94875 1100 aaKnown RBP9.32□□□□□ -0.92
HNRNPC-228ENST00000557033 AHSGP02765 367 aa9.32□□□□□ -0.92
HNRNPC-228ENST00000557033 C8GP07360 202 aa9.32□□□□□ -0.92
HNRNPC-228ENST00000557033 HIST1H2AGP0C0S8 130 aaPredicted RBP9.32□□□□□ -0.92
HNRNPC-228ENST00000557033 EZRP15311 586 aaKnown RBP9.32□□□□□ -0.92
HNRNPC-228ENST00000557033 HIST1H2ADP20671 130 aa9.32□□□□□ -0.92
HNRNPC-228ENST00000557033 PAFAH1B1P43034 410 aa9.32□□□□□ -0.92
HNRNPC-228ENST00000557033 OR1D4P47884 311 aa9.32□□□□□ -0.92
HNRNPC-228ENST00000557033 DR1Q01658 176 aa9.32□□□□□ -0.92
HNRNPC-228ENST00000557033 FOXO1Q12778 655 aa9.32□□□□□ -0.92
HNRNPC-228ENST00000557033 FAM180AQ6UWF9 173 aa9.32□□□□□ -0.92
HNRNPC-228ENST00000557033 COX15Q7KZN9 410 aa9.32□□□□□ -0.92
HNRNPC-228ENST00000557033 PALM2Q8IXS6 379 aa9.32□□□□□ -0.92
HNRNPC-228ENST00000557033 RBMXL3Q8N7X1 1067 aaKnown RBP9.32□□□□□ -0.92
HNRNPC-228ENST00000557033 ATG16L2Q8NAA4 619 aa9.32□□□□□ -0.92
HNRNPC-228ENST00000557033 CPT1CQ8TCG5 803 aa9.32□□□□□ -0.92
HNRNPC-228ENST00000557033 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.32□□□□□ -0.92
HNRNPC-228ENST00000557033 TM9SF4Q92544 642 aa9.32□□□□□ -0.92
HNRNPC-228ENST00000557033 RERGQ96A58 199 aaPredicted RBP9.32□□□□□ -0.92
HNRNPC-228ENST00000557033 PNPLA2Q96AD5 504 aa9.32□□□□□ -0.92
HNRNPC-228ENST00000557033 CERS2Q96G23 380 aa9.32□□□□□ -0.92
HNRNPC-228ENST00000557033 PDLIM2Q96JY6 352 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms