RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 ZRSR2Q15696 482 aaKnown RBP21.5■■□□□ 1.03
TDP1-216ENST00000556867 GGTA1PQ4G0N0 100 aa21.5■■□□□ 1.03
TDP1-216ENST00000556867 DEPDC1Q5TB30 811 aa21.5■■□□□ 1.03
TDP1-216ENST00000556867 AGAP7PQ5VUJ5 663 aa21.5■■□□□ 1.03
TDP1-216ENST00000556867 OR2W6PQ8NHA6 318 aa21.5■■□□□ 1.03
TDP1-216ENST00000556867 AGAP4Q96P64 663 aa21.5■■□□□ 1.03
TDP1-216ENST00000556867 CDK15Q96Q40 435 aa21.5■■□□□ 1.03
TDP1-216ENST00000556867 MTERF1Q99551 399 aaKnown RBP21.5■■□□□ 1.03
TDP1-216ENST00000556867 WDR77Q9BQA1 342 aaPredicted RBP21.5■■□□□ 1.03
TDP1-216ENST00000556867 SEMA4BQ9NPR2 832 aaPredicted RBP21.5■■□□□ 1.03
TDP1-216ENST00000556867 EMCNQ9ULC0 261 aa21.5■■□□□ 1.03
TDP1-216ENST00000556867 MMACHCQ9Y4U1 282 aa21.5■■□□□ 1.03
TDP1-216ENST00000556867 IGKV3D-11A0A0A0MRZ8 115 aa21.49■■□□□ 1.03
TDP1-216ENST00000556867 IGHV3-20A0A0C4DH32 117 aa21.49■■□□□ 1.03
TDP1-216ENST00000556867 FAM227AF5H4B4 570 aa21.49■■□□□ 1.03
TDP1-216ENST00000556867 PRMT3O60678 531 aa21.49■■□□□ 1.03
TDP1-216ENST00000556867 SEC24DO94855 1032 aaPredicted RBP21.49■■□□□ 1.03
TDP1-216ENST00000556867 OTCP00480 354 aa21.49■■□□□ 1.03
TDP1-216ENST00000556867 ICAM2P13598 275 aa21.49■■□□□ 1.03
TDP1-216ENST00000556867 ZNF793Q6ZN11 406 aa21.49■■□□□ 1.03
TDP1-216ENST00000556867 RPS27LQ71UM5 84 aaKnown RBP21.49■■□□□ 1.03
TDP1-216ENST00000556867 SLC22A9Q8IVM8 553 aa21.49■■□□□ 1.03
TDP1-216ENST00000556867 RNF175Q8N4F7 328 aa21.49■■□□□ 1.03
TDP1-216ENST00000556867 MREGQ8N565 214 aa21.49■■□□□ 1.03
TDP1-216ENST00000556867 RBMXL3Q8N7X1 1067 aaKnown RBP21.49■■□□□ 1.03
TDP1-216ENST00000556867 TM9SF4Q92544 642 aa21.49■■□□□ 1.03
TDP1-216ENST00000556867 MAGEB10Q96LZ2 347 aaPredicted RBP21.49■■□□□ 1.03
TDP1-216ENST00000556867 TMEM237Q96Q45 408 aa21.49■■□□□ 1.03
TDP1-216ENST00000556867 OR51B5Q9H339 312 aa21.49■■□□□ 1.03
TDP1-216ENST00000556867 LYRM4Q9HD34 91 aa21.49■■□□□ 1.03
TDP1-216ENST00000556867 PRDM9Q9NQV7 894 aa21.49■■□□□ 1.03
TDP1-216ENST00000556867 PSD3Q9NYI0 1048 aa21.49■■□□□ 1.03
TDP1-216ENST00000556867 RAB21Q9UL25 225 aa21.49■■□□□ 1.03
TDP1-216ENST00000556867 PPT2Q9UMR5 302 aa21.49■■□□□ 1.03
TDP1-216ENST00000556867 DAPP1Q9UN19 280 aa21.49■■□□□ 1.03
TDP1-216ENST00000556867 FOXE1O00358 373 aaPredicted RBP21.48■■□□□ 1.03
TDP1-216ENST00000556867 SH3BGRLO75368 114 aa21.48■■□□□ 1.03
TDP1-216ENST00000556867 HIST1H1TP22492 207 aaPredicted RBP21.48■■□□□ 1.03
TDP1-216ENST00000556867 ATP5A1P25705 553 aaKnown RBP21.48■■□□□ 1.03
TDP1-216ENST00000556867 CRHR1P34998 444 aa21.48■■□□□ 1.03
TDP1-216ENST00000556867 TSFMP43897 325 aaKnown RBP21.48■■□□□ 1.03
TDP1-216ENST00000556867 ARFIP1P53367 373 aa21.48■■□□□ 1.03
TDP1-216ENST00000556867 PRKAA2P54646 552 aa21.48■■□□□ 1.03
TDP1-216ENST00000556867 CDH13P55290 713 aa21.48■■□□□ 1.03
TDP1-216ENST00000556867 LIM2P55344 173 aa21.48■■□□□ 1.03
TDP1-216ENST00000556867 RPS13P62277 151 aaKnown RBP21.48■■□□□ 1.03
TDP1-216ENST00000556867 BTG2P78543 158 aa21.48■■□□□ 1.03
TDP1-216ENST00000556867 NADK2Q4G0N4 442 aa21.48■■□□□ 1.03
TDP1-216ENST00000556867 UNC50Q53HI1 259 aa21.48■■□□□ 1.03
TDP1-216ENST00000556867 SFT2D3Q587I9 215 aa21.48■■□□□ 1.03
TDP1-216ENST00000556867 ZNF678Q5SXM1 525 aa21.48■■□□□ 1.03
TDP1-216ENST00000556867 C10orf62Q5T681 223 aaPredicted RBP21.48■■□□□ 1.03
TDP1-216ENST00000556867 PLAG1Q6DJT9 500 aa21.48■■□□□ 1.03
TDP1-216ENST00000556867 JMJD6Q6NYC1 403 aaPredicted RBP21.48■■□□□ 1.03
TDP1-216ENST00000556867 IGFL2Q6UWQ7 119 aa21.48■■□□□ 1.03
TDP1-216ENST00000556867 ACOT4Q8N9L9 421 aa21.48■■□□□ 1.03
TDP1-216ENST00000556867 PSMF1Q92530 271 aa21.48■■□□□ 1.03
TDP1-216ENST00000556867 RGMAQ96B86 450 aa21.48■■□□□ 1.03
TDP1-216ENST00000556867 PTCHD1Q96NR3 888 aa21.48■■□□□ 1.03
TDP1-216ENST00000556867 CENPKQ9BS16 269 aa21.48■■□□□ 1.03
TDP1-216ENST00000556867 EPN3Q9H201 632 aa21.48■■□□□ 1.03
TDP1-216ENST00000556867 RTCAO00442 366 aaKnown RBP21.47■■□□□ 1.03
TDP1-216ENST00000556867 PROCP04070 461 aa21.47■■□□□ 1.03
TDP1-216ENST00000556867 CELA2AP08217 269 aa21.47■■□□□ 1.03
TDP1-216ENST00000556867 KRT4P19013 534 aa21.47■■□□□ 1.03
TDP1-216ENST00000556867 IMPDH1P20839 514 aa21.47■■□□□ 1.03
TDP1-216ENST00000556867 MAOAP21397 527 aa21.47■■□□□ 1.03
TDP1-216ENST00000556867 PTX3P26022 381 aaPredicted RBP21.47■■□□□ 1.03
TDP1-216ENST00000556867 SSR2P43308 183 aa21.47■■□□□ 1.03
TDP1-216ENST00000556867 CCT5P48643 541 aa21.47■■□□□ 1.03
TDP1-216ENST00000556867 RAP1GDS1P52306 607 aa21.47■■□□□ 1.03
TDP1-216ENST00000556867 OR4D2P58180 307 aa21.47■■□□□ 1.03
TDP1-216ENST00000556867 CLCQ05315 142 aa21.47■■□□□ 1.03
TDP1-216ENST00000556867 SLC18A2Q05940 514 aa21.47■■□□□ 1.03
TDP1-216ENST00000556867 IFFO1Q0D2I5 559 aa21.47■■□□□ 1.03
TDP1-216ENST00000556867 CUL3Q13618 768 aa21.47■■□□□ 1.03
TDP1-216ENST00000556867 RCN2Q14257 317 aa21.47■■□□□ 1.03
TDP1-216ENST00000556867 AP5B1Q2VPB7 878 aa21.47■■□□□ 1.03
TDP1-216ENST00000556867 COLEC12Q5KU26 742 aa21.47■■□□□ 1.03
TDP1-216ENST00000556867 FRG2Q64ET8 278 aa21.47■■□□□ 1.03
TDP1-216ENST00000556867 PAPD4Q6PIY7 484 aaKnown RBP21.47■■□□□ 1.03
TDP1-216ENST00000556867 MILR1Q7Z6M3 343 aa21.47■■□□□ 1.03
TDP1-216ENST00000556867 SCUBE1Q8IWY4 988 aa21.47■■□□□ 1.03
TDP1-216ENST00000556867 ZNF595Q8IYB9 648 aa21.47■■□□□ 1.03
TDP1-216ENST00000556867 OR4F6Q8NGB9 312 aa21.47■■□□□ 1.03
TDP1-216ENST00000556867 PPP4R1Q8TF05 950 aa21.47■■□□□ 1.03
TDP1-216ENST00000556867 L3HYPDHQ96EM0 354 aa21.47■■□□□ 1.03
TDP1-216ENST00000556867 FRG2BQ96QU4 278 aa21.47■■□□□ 1.03
TDP1-216ENST00000556867 LPAR4Q99677 370 aa21.47■■□□□ 1.03
TDP1-216ENST00000556867 ROPN1BQ9BZX4 212 aaPredicted RBP21.47■■□□□ 1.03
TDP1-216ENST00000556867 ROPN1Q9HAT0 212 aaPredicted RBP21.47■■□□□ 1.03
TDP1-216ENST00000556867 ZBTB20Q9HC78 741 aaPredicted RBP21.47■■□□□ 1.03
TDP1-216ENST00000556867 NECTIN3Q9NQS3 549 aa21.47■■□□□ 1.03
TDP1-216ENST00000556867 KCMF1Q9P0J7 381 aa21.47■■□□□ 1.03
TDP1-216ENST00000556867 LGALS13Q9UHV8 139 aa21.47■■□□□ 1.03
TDP1-216ENST00000556867 GRID1Q9ULK0 1009 aa21.47■■□□□ 1.03
TDP1-216ENST00000556867 MRPS33Q9Y291 106 aaKnown RBP21.47■■□□□ 1.03
TDP1-216ENST00000556867 CPAMD8Q8IZJ3 1885 aa21.46■■□□□ 1.03
TDP1-216ENST00000556867 A0A1B0GTL3 188 aa21.46■■□□□ 1.03
TDP1-216ENST00000556867 TCRBV16S1A1N1A0A5B0 115 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms