RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 K7EPI3 171 aa9.69□□□□□ -0.86
SHMT2-224ENST00000556737 CLGNO14967 610 aa9.69□□□□□ -0.86
SHMT2-224ENST00000556737 ERI3O43414 337 aaKnown RBP9.69□□□□□ -0.86
SHMT2-224ENST00000556737 KLK8O60259 260 aa9.69□□□□□ -0.86
SHMT2-224ENST00000556737 MAN1A2O60476 641 aa9.69□□□□□ -0.86
SHMT2-224ENST00000556737 SEMA7AO75326 666 aa9.69□□□□□ -0.86
SHMT2-224ENST00000556737 H2AFYO75367 372 aaKnown RBP9.69□□□□□ -0.86
SHMT2-224ENST00000556737 UTP20O75691 2785 aaKnown RBP9.69□□□□□ -0.86
SHMT2-224ENST00000556737 WFS1O76024 890 aa9.69□□□□□ -0.86
SHMT2-224ENST00000556737 WDPCPO95876 746 aa9.69□□□□□ -0.86
SHMT2-224ENST00000556737 F10P00742 488 aa9.69□□□□□ -0.86
SHMT2-224ENST00000556737 S100BP04271 92 aaPredicted RBP9.69□□□□□ -0.86
SHMT2-224ENST00000556737 RNH1P13489 461 aaKnown RBP9.69□□□□□ -0.86
SHMT2-224ENST00000556737 ICAM2P13598 275 aa9.69□□□□□ -0.86
SHMT2-224ENST00000556737 CASP2P42575 452 aa9.69□□□□□ -0.86
SHMT2-224ENST00000556737 GLRBP48167 497 aa9.69□□□□□ -0.86
SHMT2-224ENST00000556737 HNRNPFP52597 415 aaKnown RBP9.69□□□□□ -0.86
SHMT2-224ENST00000556737 OR4D2P58180 307 aa9.69□□□□□ -0.86
SHMT2-224ENST00000556737 SLC26A5P58743 744 aa9.69□□□□□ -0.86
SHMT2-224ENST00000556737 AP2B1P63010 937 aa9.69□□□□□ -0.86
SHMT2-224ENST00000556737 BTN3A2P78410 334 aa9.69□□□□□ -0.86
SHMT2-224ENST00000556737 ARG2P78540 354 aa9.69□□□□□ -0.86
SHMT2-224ENST00000556737 CHIT1Q13231 466 aa9.69□□□□□ -0.86
SHMT2-224ENST00000556737 SETDB1Q15047 1291 aa9.69□□□□□ -0.86
SHMT2-224ENST00000556737 TBCCQ15814 346 aa9.69□□□□□ -0.86
SHMT2-224ENST00000556737 EXT1Q16394 746 aa9.69□□□□□ -0.86
SHMT2-224ENST00000556737 TECRLQ5HYJ1 363 aa9.69□□□□□ -0.86
SHMT2-224ENST00000556737 HIVEP3Q5T1R4 2406 aa9.69□□□□□ -0.86
SHMT2-224ENST00000556737 FCRLBQ6BAA4 426 aa9.69□□□□□ -0.86
SHMT2-224ENST00000556737 RPUSD3Q6P087 351 aaKnown RBP9.69□□□□□ -0.86
SHMT2-224ENST00000556737 ABHD17CQ6PCB6 329 aa9.69□□□□□ -0.86
SHMT2-224ENST00000556737 CCDC91Q7Z6B0 441 aa9.69□□□□□ -0.86
SHMT2-224ENST00000556737 UBE3DQ7Z6J8 389 aa9.69□□□□□ -0.86
SHMT2-224ENST00000556737 MTERF4Q7Z6M4 381 aaKnown RBP9.69□□□□□ -0.86
SHMT2-224ENST00000556737 PLD6Q8N2A8 252 aaKnown RBP9.69□□□□□ -0.86
SHMT2-224ENST00000556737 RIBC1Q8N443 379 aaPredicted RBP9.69□□□□□ -0.86
SHMT2-224ENST00000556737 TMEM52Q8NDY8 209 aa9.69□□□□□ -0.86
SHMT2-224ENST00000556737 OR2L5Q8NG80 312 aa9.69□□□□□ -0.86
SHMT2-224ENST00000556737 M1APQ8TC57 530 aa9.69□□□□□ -0.86
SHMT2-224ENST00000556737 GRHL3Q8TE85 626 aa9.69□□□□□ -0.86
SHMT2-224ENST00000556737 CCT6BQ92526 530 aa9.69□□□□□ -0.86
SHMT2-224ENST00000556737 HAS2Q92819 552 aa9.69□□□□□ -0.86
SHMT2-224ENST00000556737 ARL8AQ96BM9 186 aa9.69□□□□□ -0.86
SHMT2-224ENST00000556737 SLX1AQ9BQ83 275 aa9.69□□□□□ -0.86
SHMT2-224ENST00000556737 TMEM109Q9BVC6 243 aa9.69□□□□□ -0.86
SHMT2-224ENST00000556737 REXO4Q9GZR2 422 aaKnown RBP9.69□□□□□ -0.86
SHMT2-224ENST00000556737 TMBIM4Q9HC24 238 aa9.69□□□□□ -0.86
SHMT2-224ENST00000556737 MMP25Q9NPA2 562 aa9.69□□□□□ -0.86
SHMT2-224ENST00000556737 COPG1Q9Y678 874 aaKnown RBP9.69□□□□□ -0.86
SHMT2-224ENST00000556737 CCDC189A1A4V9 331 aa9.68□□□□□ -0.86
SHMT2-224ENST00000556737 DYTNA2CJ06 578 aa9.68□□□□□ -0.86
SHMT2-224ENST00000556737 OR5H15A6NDH6 313 aa9.68□□□□□ -0.86
SHMT2-224ENST00000556737 SAGE2PA6NJ88 616 aa9.68□□□□□ -0.86
SHMT2-224ENST00000556737 B4GALT2O60909 372 aa9.68□□□□□ -0.86
SHMT2-224ENST00000556737 KRT38O76015 456 aa9.68□□□□□ -0.86
SHMT2-224ENST00000556737 KLHL2O95198 593 aa9.68□□□□□ -0.86
SHMT2-224ENST00000556737 CERS1P27544 350 aa9.68□□□□□ -0.86
SHMT2-224ENST00000556737 HPDP32754 393 aaPredicted RBP9.68□□□□□ -0.86
SHMT2-224ENST00000556737 SERPINB9P50453 376 aa9.68□□□□□ -0.86
SHMT2-224ENST00000556737 TDGF1P3P51864 188 aa9.68□□□□□ -0.86
SHMT2-224ENST00000556737 RAB38P57729 211 aa9.68□□□□□ -0.86
SHMT2-224ENST00000556737 IRF8Q02556 426 aa9.68□□□□□ -0.86
SHMT2-224ENST00000556737 ZNF33BQ06732 778 aa9.68□□□□□ -0.86
SHMT2-224ENST00000556737 INAQ16352 499 aa9.68□□□□□ -0.86
SHMT2-224ENST00000556737 FAM83EQ2M2I3 478 aa9.68□□□□□ -0.86
SHMT2-224ENST00000556737 ACER2Q5QJU3 275 aa9.68□□□□□ -0.86
SHMT2-224ENST00000556737 AGBL2Q5U5Z8 902 aa9.68□□□□□ -0.86
SHMT2-224ENST00000556737 ZNF324BQ6AW86 544 aaPredicted RBP9.68□□□□□ -0.86
SHMT2-224ENST00000556737 GRHL2Q6ISB3 625 aa9.68□□□□□ -0.86
SHMT2-224ENST00000556737 ZNF793Q6ZN11 406 aa9.68□□□□□ -0.86
SHMT2-224ENST00000556737 CRLF3Q8IUI8 442 aa9.68□□□□□ -0.86
SHMT2-224ENST00000556737 LAS2Q8IYD9 372 aa9.68□□□□□ -0.86
SHMT2-224ENST00000556737 BEST3Q8N1M1 668 aa9.68□□□□□ -0.86
SHMT2-224ENST00000556737 KIF2BQ8N4N8 673 aa9.68□□□□□ -0.86
SHMT2-224ENST00000556737 FAM47BQ8NA70 645 aa9.68□□□□□ -0.86
SHMT2-224ENST00000556737 NFAM1Q8NET5 270 aaPredicted RBP9.68□□□□□ -0.86
SHMT2-224ENST00000556737 ELP5Q8TE02 316 aa9.68□□□□□ -0.86
SHMT2-224ENST00000556737 ZNF473Q8WTR7 871 aaKnown RBP9.68□□□□□ -0.86
SHMT2-224ENST00000556737 DCAKDQ8WVC6 231 aa9.68□□□□□ -0.86
SHMT2-224ENST00000556737 ATP6V1G3Q96LB4 118 aa9.68□□□□□ -0.86
SHMT2-224ENST00000556737 F2RL3Q96RI0 385 aa9.68□□□□□ -0.86
SHMT2-224ENST00000556737 TAAR6Q96RI8 345 aa9.68□□□□□ -0.86
SHMT2-224ENST00000556737 CSF3RQ99062 836 aa9.68□□□□□ -0.86
SHMT2-224ENST00000556737 LPAR4Q99677 370 aa9.68□□□□□ -0.86
SHMT2-224ENST00000556737 NPLQ9BXD5 320 aaPredicted RBP9.68□□□□□ -0.86
SHMT2-224ENST00000556737 MS4A8Q9BY19 250 aa9.68□□□□□ -0.86
SHMT2-224ENST00000556737 PRDM9Q9NQV7 894 aa9.68□□□□□ -0.86
SHMT2-224ENST00000556737 OPTCQ9UBM4 332 aa9.68□□□□□ -0.86
SHMT2-224ENST00000556737 FETUBQ9UGM5 382 aa9.68□□□□□ -0.86
SHMT2-224ENST00000556737 MMACHCQ9Y4U1 282 aa9.68□□□□□ -0.86
SHMT2-224ENST00000556737 SPTAN1Q13813 2472 aaKnown RBP9.67□□□□□ -0.86
SHMT2-224ENST00000556737 TRAV17A0A0B4J275 112 aa9.67□□□□□ -0.86
SHMT2-224ENST00000556737 BLACEA4D250 179 aa9.67□□□□□ -0.86
SHMT2-224ENST00000556737 ANKDD1BA6NHY2 528 aa9.67□□□□□ -0.86
SHMT2-224ENST00000556737 SYCE1LA8MT33 242 aa9.67□□□□□ -0.86
SHMT2-224ENST00000556737 HMGB1P1B2RPK0 211 aaPredicted RBP9.67□□□□□ -0.86
SHMT2-224ENST00000556737 TRIM49D1C9J1S8 452 aa9.67□□□□□ -0.86
SHMT2-224ENST00000556737 H3BQF6 201 aa9.67□□□□□ -0.86
SHMT2-224ENST00000556737 PSMD12O00232 456 aaPredicted RBP9.67□□□□□ -0.86
SHMT2-224ENST00000556737 CYR61O00622 381 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms