RNA–Protein interactions for RNA: ENST00000556565.5

TUBB3-212, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-212ENST00000556565 RNF175Q8N4F7 328 aa16.52■□□□□ 0.24
TUBB3-212ENST00000556565 SIRT6Q8N6T7 355 aa16.52■□□□□ 0.24
TUBB3-212ENST00000556565 L3MBTL4Q8NA19 623 aa16.52■□□□□ 0.24
TUBB3-212ENST00000556565 SRFBP1Q8NEF9 429 aaKnown RBP16.52■□□□□ 0.24
TUBB3-212ENST00000556565 OR52B6Q8NGF0 335 aa16.52■□□□□ 0.24
TUBB3-212ENST00000556565 PPP4R1Q8TF05 950 aa16.52■□□□□ 0.24
TUBB3-212ENST00000556565 CMTM7Q96FZ5 175 aa16.52■□□□□ 0.24
TUBB3-212ENST00000556565 PTCHD1Q96NR3 888 aa16.52■□□□□ 0.24
TUBB3-212ENST00000556565 NSUN5Q96P11 429 aaKnown RBP16.52■□□□□ 0.24
TUBB3-212ENST00000556565 LPAR4Q99677 370 aa16.52■□□□□ 0.24
TUBB3-212ENST00000556565 TBCDQ9BTW9 1192 aa16.52■□□□□ 0.24
TUBB3-212ENST00000556565 ROGDIQ9GZN7 287 aa16.52■□□□□ 0.24
TUBB3-212ENST00000556565 ILKAPQ9H0C8 392 aaPredicted RBP16.52■□□□□ 0.24
TUBB3-212ENST00000556565 NOL11Q9H8H0 719 aaKnown RBP16.52■□□□□ 0.24
TUBB3-212ENST00000556565 PPCSQ9HAB8 311 aa16.52■□□□□ 0.24
TUBB3-212ENST00000556565 SLAMF7Q9NQ25 335 aa16.52■□□□□ 0.24
TUBB3-212ENST00000556565 PRDM9Q9NQV7 894 aa16.52■□□□□ 0.24
TUBB3-212ENST00000556565 PRDM7Q9NQW5 492 aa16.52■□□□□ 0.24
TUBB3-212ENST00000556565 ADGRE2Q9UHX3 823 aa16.52■□□□□ 0.24
TUBB3-212ENST00000556565 RNF11Q9Y3C5 154 aa16.52■□□□□ 0.24
TUBB3-212ENST00000556565 MMACHCQ9Y4U1 282 aa16.52■□□□□ 0.24
TUBB3-212ENST00000556565 PCDHGA11Q9Y5H2 935 aa16.52■□□□□ 0.24
TUBB3-212ENST00000556565 CSAG2Q9Y5P2 127 aa16.52■□□□□ 0.24
TUBB3-212ENST00000556565 PRRC2CQ9Y520 2896 aaKnown RBP16.52■□□□□ 0.24
TUBB3-212ENST00000556565 RTCAO00442 366 aaKnown RBP16.51■□□□□ 0.23
TUBB3-212ENST00000556565 SLU7O95391 586 aaKnown RBP16.51■□□□□ 0.23
TUBB3-212ENST00000556565 CLDN9O95484 217 aa16.51■□□□□ 0.23
TUBB3-212ENST00000556565 TGFB1P01137 390 aa16.51■□□□□ 0.23
TUBB3-212ENST00000556565 UQCRHP07919 91 aa16.51■□□□□ 0.23
TUBB3-212ENST00000556565 PYGBP11216 843 aa16.51■□□□□ 0.23
TUBB3-212ENST00000556565 ARL1P40616 181 aaPredicted RBP16.51■□□□□ 0.23
TUBB3-212ENST00000556565 SLCO1A2P46721 670 aa16.51■□□□□ 0.23
TUBB3-212ENST00000556565 CCNG1P51959 295 aa16.51■□□□□ 0.23
TUBB3-212ENST00000556565 ACTN3Q08043 901 aaPredicted RBP16.51■□□□□ 0.23
TUBB3-212ENST00000556565 TRAF3Q13114 568 aa16.51■□□□□ 0.23
TUBB3-212ENST00000556565 IGFBP7Q16270 282 aa16.51■□□□□ 0.23
TUBB3-212ENST00000556565 EXT1Q16394 746 aa16.51■□□□□ 0.23
TUBB3-212ENST00000556565 CPSF6Q16630 551 aaKnown RBP eCLIP16.51■□□□□ 0.23
TUBB3-212ENST00000556565 PLEKHN1Q494U1 663 aaPredicted RBP16.51■□□□□ 0.23
TUBB3-212ENST00000556565 PRR30Q53SZ7 412 aaPredicted RBP16.51■□□□□ 0.23
TUBB3-212ENST00000556565 CHSY3Q70JA7 882 aa16.51■□□□□ 0.23
TUBB3-212ENST00000556565 TDRPQ86YL5 185 aa16.51■□□□□ 0.23
TUBB3-212ENST00000556565 SCUBE1Q8IWY4 988 aa16.51■□□□□ 0.23
TUBB3-212ENST00000556565 FAM47BQ8NA70 645 aa16.51■□□□□ 0.23
TUBB3-212ENST00000556565 ATP6V1E2Q96A05 226 aa16.51■□□□□ 0.23
TUBB3-212ENST00000556565 MIB2Q96AX9 1013 aa16.51■□□□□ 0.23
TUBB3-212ENST00000556565 REPS1Q96D71 796 aa16.51■□□□□ 0.23
TUBB3-212ENST00000556565 CDK15Q96Q40 435 aa16.51■□□□□ 0.23
TUBB3-212ENST00000556565 LMF1Q96S06 567 aa16.51■□□□□ 0.23
TUBB3-212ENST00000556565 CSF3RQ99062 836 aa16.51■□□□□ 0.23
TUBB3-212ENST00000556565 MTERF1Q99551 399 aaKnown RBP16.51■□□□□ 0.23
TUBB3-212ENST00000556565 OR51B5Q9H339 312 aa16.51■□□□□ 0.23
TUBB3-212ENST00000556565 ZBTB26Q9HCK0 441 aa16.51■□□□□ 0.23
TUBB3-212ENST00000556565 NECTIN3Q9NQS3 549 aa16.51■□□□□ 0.23
TUBB3-212ENST00000556565 PLAAQ9Y263 795 aa16.51■□□□□ 0.23
TUBB3-212ENST00000556565 TCRBV16S1A1N1A0A5B0 115 aa16.5■□□□□ 0.23
TUBB3-212ENST00000556565 SMIM23A6NLE4 172 aa16.5■□□□□ 0.23
TUBB3-212ENST00000556565 SAP18O00422 153 aaKnown RBP16.5■□□□□ 0.23
TUBB3-212ENST00000556565 SCELO95171 688 aa16.5■□□□□ 0.23
TUBB3-212ENST00000556565 GSTA1P08263 222 aa16.5■□□□□ 0.23
TUBB3-212ENST00000556565 TAC1P20366 129 aa16.5■□□□□ 0.23
TUBB3-212ENST00000556565 HIST1H1TP22492 207 aaPredicted RBP16.5■□□□□ 0.23
TUBB3-212ENST00000556565 ATP5A1P25705 553 aaKnown RBP16.5■□□□□ 0.23
TUBB3-212ENST00000556565 HSD17B3P37058 310 aa16.5■□□□□ 0.23
TUBB3-212ENST00000556565 SSR2P43308 183 aa16.5■□□□□ 0.23
TUBB3-212ENST00000556565 HNRNPFP52597 415 aaKnown RBP16.5■□□□□ 0.23
TUBB3-212ENST00000556565 LIM2P55344 173 aa16.5■□□□□ 0.23
TUBB3-212ENST00000556565 RPS13P62277 151 aaKnown RBP16.5■□□□□ 0.23
TUBB3-212ENST00000556565 PHEXP78562 749 aa16.5■□□□□ 0.23
TUBB3-212ENST00000556565 ZRSR2Q15696 482 aaKnown RBP16.5■□□□□ 0.23
TUBB3-212ENST00000556565 DEPDC1Q5TB30 811 aa16.5■□□□□ 0.23
TUBB3-212ENST00000556565 B3GNTL1Q67FW5 361 aaPredicted RBP16.5■□□□□ 0.23
TUBB3-212ENST00000556565 CUZD1Q86UP6 607 aa16.5■□□□□ 0.23
TUBB3-212ENST00000556565 CYP4X1Q8N118 509 aa16.5■□□□□ 0.23
TUBB3-212ENST00000556565 TMEM52Q8NDY8 209 aa16.5■□□□□ 0.23
TUBB3-212ENST00000556565 ARMC2Q8NEN0 867 aa16.5■□□□□ 0.23
TUBB3-212ENST00000556565 WDR20Q8TBZ3 569 aa16.5■□□□□ 0.23
TUBB3-212ENST00000556565 CPT1CQ8TCG5 803 aa16.5■□□□□ 0.23
TUBB3-212ENST00000556565 EPS8L3Q8TE67 593 aaKnown RBP16.5■□□□□ 0.23
TUBB3-212ENST00000556565 ZNF483Q8TF39 744 aaPredicted RBP16.5■□□□□ 0.23
TUBB3-212ENST00000556565 C1QTNF3Q9BXJ4 246 aa16.5■□□□□ 0.23
TUBB3-212ENST00000556565 SEMA4BQ9NPR2 832 aaPredicted RBP16.5■□□□□ 0.23
TUBB3-212ENST00000556565 DAPP1Q9UN19 280 aa16.5■□□□□ 0.23
TUBB3-212ENST00000556565 MRPS33Q9Y291 106 aaKnown RBP16.5■□□□□ 0.23
TUBB3-212ENST00000556565 A0A1W2PPM1 405 aa16.49■□□□□ 0.23
TUBB3-212ENST00000556565 FOXO6A8MYZ6 492 aa16.49■□□□□ 0.23
TUBB3-212ENST00000556565 CYR61O00622 381 aa16.49■□□□□ 0.23
TUBB3-212ENST00000556565 RAP1GDS1P52306 607 aa16.49■□□□□ 0.23
TUBB3-212ENST00000556565 HSD17B7P56937 341 aa16.49■□□□□ 0.23
TUBB3-212ENST00000556565 SLC26A5P58743 744 aa16.49■□□□□ 0.23
TUBB3-212ENST00000556565 RCN2Q14257 317 aa16.49■□□□□ 0.23
TUBB3-212ENST00000556565 INPP5JQ15735 1006 aaPredicted RBP16.49■□□□□ 0.23
TUBB3-212ENST00000556565 AP5B1Q2VPB7 878 aa16.49■□□□□ 0.23
TUBB3-212ENST00000556565 RPS27LQ71UM5 84 aaKnown RBP16.49■□□□□ 0.23
TUBB3-212ENST00000556565 ZNF595Q8IYB9 648 aa16.49■□□□□ 0.23
TUBB3-212ENST00000556565 IQCKQ8N0W5 287 aa16.49■□□□□ 0.23
TUBB3-212ENST00000556565 ACOT4Q8N9L9 421 aa16.49■□□□□ 0.23
TUBB3-212ENST00000556565 M1APQ8TC57 530 aa16.49■□□□□ 0.23
TUBB3-212ENST00000556565 CNDP1Q96KN2 507 aa16.49■□□□□ 0.23
TUBB3-212ENST00000556565 MAGEB10Q96LZ2 347 aaPredicted RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms