RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 ITGA8P53708 1063 aa6.38□□□□□ -1.39
ATXN3-236ENST00000556220 GEMP55040 296 aa6.38□□□□□ -1.39
ATXN3-236ENST00000556220 CSE1LP55060 971 aaKnown RBP6.38□□□□□ -1.39
ATXN3-236ENST00000556220 DYNLT1P63172 113 aa6.38□□□□□ -1.39
ATXN3-236ENST00000556220 POU4F1Q01851 419 aa6.38□□□□□ -1.39
ATXN3-236ENST00000556220 PTK6Q13882 451 aa6.38□□□□□ -1.39
ATXN3-236ENST00000556220 ITIH4Q14624 930 aa6.38□□□□□ -1.39
ATXN3-236ENST00000556220 USP10Q14694 798 aaKnown RBP6.38□□□□□ -1.39
ATXN3-236ENST00000556220 NAA25Q14CX7 972 aa6.38□□□□□ -1.39
ATXN3-236ENST00000556220 SFT2D3Q587I9 215 aa6.38□□□□□ -1.39
ATXN3-236ENST00000556220 CATSPEREQ5SY80 951 aa6.38□□□□□ -1.39
ATXN3-236ENST00000556220 MFSD4BQ5TF39 518 aa6.38□□□□□ -1.39
ATXN3-236ENST00000556220 PODNL1Q6PEZ8 512 aa6.38□□□□□ -1.39
ATXN3-236ENST00000556220 PAPD4Q6PIY7 484 aaKnown RBP6.38□□□□□ -1.39
ATXN3-236ENST00000556220 PCGF5Q86SE9 256 aa6.38□□□□□ -1.39
ATXN3-236ENST00000556220 SLC13A5Q86YT5 568 aaPredicted RBP6.38□□□□□ -1.39
ATXN3-236ENST00000556220 RFX6Q8HWS3 928 aa6.38□□□□□ -1.39
ATXN3-236ENST00000556220 VRK3Q8IV63 474 aa6.38□□□□□ -1.39
ATXN3-236ENST00000556220 SLC22A15Q8IZD6 547 aa6.38□□□□□ -1.39
ATXN3-236ENST00000556220 SYT8Q8NBV8 401 aa6.38□□□□□ -1.39
ATXN3-236ENST00000556220 PLPP5Q8NEB5 264 aa6.38□□□□□ -1.39
ATXN3-236ENST00000556220 OR2A1Q8NGT9 310 aa6.38□□□□□ -1.39
ATXN3-236ENST00000556220 OR51Q1Q8NH59 317 aa6.38□□□□□ -1.39
ATXN3-236ENST00000556220 HMGCLL1Q8TB92 370 aa6.38□□□□□ -1.39
ATXN3-236ENST00000556220 RNASE6Q93091 150 aaKnown RBP6.38□□□□□ -1.39
ATXN3-236ENST00000556220 LRRC46Q96FV0 321 aa6.38□□□□□ -1.39
ATXN3-236ENST00000556220 DNAJC1Q96KC8 554 aaKnown RBP6.38□□□□□ -1.39
ATXN3-236ENST00000556220 OR2A5Q96R48 311 aa6.38□□□□□ -1.39
ATXN3-236ENST00000556220 LPAR4Q99677 370 aa6.38□□□□□ -1.39
ATXN3-236ENST00000556220 APOL2Q9BQE5 337 aa6.38□□□□□ -1.39
ATXN3-236ENST00000556220 DPH7Q9BTV6 452 aa6.38□□□□□ -1.39
ATXN3-236ENST00000556220 RAB11FIP5Q9BXF6 653 aa6.38□□□□□ -1.39
ATXN3-236ENST00000556220 SYNPO2LQ9H987 977 aa6.38□□□□□ -1.39
ATXN3-236ENST00000556220 SAE1Q9UBE0 346 aaPredicted RBP6.38□□□□□ -1.39
ATXN3-236ENST00000556220 B4GALT7Q9UBV7 327 aa6.38□□□□□ -1.39
ATXN3-236ENST00000556220 RSPH14Q9UHP6 348 aa6.38□□□□□ -1.39
ATXN3-236ENST00000556220 TRHDEQ9UKU6 1024 aa6.38□□□□□ -1.39
ATXN3-236ENST00000556220 ABCA1O95477 2261 aa6.38□□□□□ -1.39
ATXN3-236ENST00000556220 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.38□□□□□ -1.394e-12■■■□□ 18.3
ATXN3-236ENST00000556220 FEZF1A0PJY2 475 aa6.37□□□□□ -1.39
ATXN3-236ENST00000556220 TRIM64A6NGJ6 449 aa6.37□□□□□ -1.39
ATXN3-236ENST00000556220 TUBAL3A6NHL2 446 aa6.37□□□□□ -1.39
ATXN3-236ENST00000556220 TRIM64BA6NI03 449 aa6.37□□□□□ -1.39
ATXN3-236ENST00000556220 ARHGEF33A8MVX0 844 aa6.37□□□□□ -1.39
ATXN3-236ENST00000556220 GOLGA6L19H0YKK7 550 aa6.37□□□□□ -1.39
ATXN3-236ENST00000556220 TXNDC9O14530 226 aa6.37□□□□□ -1.39
ATXN3-236ENST00000556220 SMPD2O60906 423 aa6.37□□□□□ -1.39
ATXN3-236ENST00000556220 MFAP3LO75121 409 aa6.37□□□□□ -1.39
ATXN3-236ENST00000556220 PHF2O75151 1096 aa6.37□□□□□ -1.39
ATXN3-236ENST00000556220 ANXA9O76027 345 aa6.37□□□□□ -1.39
ATXN3-236ENST00000556220 GOSR1O95249 250 aa6.37□□□□□ -1.39
ATXN3-236ENST00000556220 IFNA2P01563 188 aa6.37□□□□□ -1.39
ATXN3-236ENST00000556220 TP53P04637 393 aaPredicted RBP6.37□□□□□ -1.39
ATXN3-236ENST00000556220 TACR1P25103 407 aa6.37□□□□□ -1.39
ATXN3-236ENST00000556220 CCR7P32248 378 aa6.37□□□□□ -1.39
ATXN3-236ENST00000556220 XCR1P46094 333 aa6.37□□□□□ -1.39
ATXN3-236ENST00000556220 SLC26A5P58743 744 aa6.37□□□□□ -1.39
ATXN3-236ENST00000556220 HSPA14Q0VDF9 509 aa6.37□□□□□ -1.39
ATXN3-236ENST00000556220 NSDHLQ15738 373 aa6.37□□□□□ -1.39
ATXN3-236ENST00000556220 NDUFA9Q16795 377 aa6.37□□□□□ -1.39
ATXN3-236ENST00000556220 FBXL19-AS1Q494R0 122 aa6.37□□□□□ -1.39
ATXN3-236ENST00000556220 FILIP1LQ4L180 1135 aa6.37□□□□□ -1.39
ATXN3-236ENST00000556220 RIPPLY2Q5TAB7 128 aa6.37□□□□□ -1.39
ATXN3-236ENST00000556220 BICRALQ6AI39 1079 aa6.37□□□□□ -1.39
ATXN3-236ENST00000556220 DENND5AQ6IQ26 1287 aa6.37□□□□□ -1.39
ATXN3-236ENST00000556220 TTC23LQ6PF05 361 aa6.37□□□□□ -1.39
ATXN3-236ENST00000556220 PACS1Q6VY07 963 aa6.37□□□□□ -1.39
ATXN3-236ENST00000556220 YTHDF3Q7Z739 585 aaKnown RBP6.37□□□□□ -1.39
ATXN3-236ENST00000556220 KIF2BQ8N4N8 673 aa6.37□□□□□ -1.39
ATXN3-236ENST00000556220 RAB42Q8N4Z0 105 aa6.37□□□□□ -1.39
ATXN3-236ENST00000556220 SLCO2A1Q92959 643 aa6.37□□□□□ -1.39
ATXN3-236ENST00000556220 RERGQ96A58 199 aaPredicted RBP6.37□□□□□ -1.39
ATXN3-236ENST00000556220 CDKN2AIPNLQ96HQ2 116 aa6.37□□□□□ -1.39
ATXN3-236ENST00000556220 SPATA13Q96N96 652 aa6.37□□□□□ -1.39
ATXN3-236ENST00000556220 PTCHD1Q96NR3 888 aa6.37□□□□□ -1.39
ATXN3-236ENST00000556220 SMC6Q96SB8 1091 aa6.37□□□□□ -1.39
ATXN3-236ENST00000556220 DNAJC7Q99615 494 aa6.37□□□□□ -1.39
ATXN3-236ENST00000556220 PIP5K1AQ99755 562 aa6.37□□□□□ -1.39
ATXN3-236ENST00000556220 SH3GL2Q99962 352 aa6.37□□□□□ -1.39
ATXN3-236ENST00000556220 GORASP1Q9BQQ3 440 aa6.37□□□□□ -1.39
ATXN3-236ENST00000556220 DESI2Q9BSY9 194 aa6.37□□□□□ -1.39
ATXN3-236ENST00000556220 ATG10Q9H0Y0 220 aa6.37□□□□□ -1.39
ATXN3-236ENST00000556220 ZDHHC11Q9H8X9 412 aa6.37□□□□□ -1.39
ATXN3-236ENST00000556220 SPTLC3Q9NUV7 552 aa6.37□□□□□ -1.39
ATXN3-236ENST00000556220 NLE1Q9NVX2 485 aaPredicted RBP6.37□□□□□ -1.39
ATXN3-236ENST00000556220 UVRAGQ9P2Y5 699 aa6.37□□□□□ -1.39
ATXN3-236ENST00000556220 SVEP1Q4LDE5 3571 aa6.37□□□□□ -1.39
ATXN3-236ENST00000556220 ROS1P08922 2347 aa6.36□□□□□ -1.39
ATXN3-236ENST00000556220 IGKV1-8A0A0C4DH67 115 aa6.36□□□□□ -1.39
ATXN3-236ENST00000556220 A0A1B0GVC2 190 aa6.36□□□□□ -1.39
ATXN3-236ENST00000556220 A0A1W2PPR1 153 aa6.36□□□□□ -1.39
ATXN3-236ENST00000556220 CLCA1A8K7I4 914 aa6.36□□□□□ -1.39
ATXN3-236ENST00000556220 HSPB2A8KAH6 182 aa6.36□□□□□ -1.39
ATXN3-236ENST00000556220 F8W8V4 182 aa6.36□□□□□ -1.39
ATXN3-236ENST00000556220 CES2O00748 559 aa6.36□□□□□ -1.39
ATXN3-236ENST00000556220 FCHO1O14526 889 aa6.36□□□□□ -1.39
ATXN3-236ENST00000556220 OR1I1O60431 355 aa6.36□□□□□ -1.39
ATXN3-236ENST00000556220 WDR1O75083 606 aa6.36□□□□□ -1.39
ATXN3-236ENST00000556220 NSA2O95478 260 aaKnown RBP6.36□□□□□ -1.39
ATXN3-236ENST00000556220 C1orf105O95561 183 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms