RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 ZFC3H1O60293 1989 aaKnown RBP14.22□□□□□ -0.13
NEK9-209ENST00000556170 J3KTA2 159 aa14.22□□□□□ -0.13
NEK9-209ENST00000556170 ZW10O43264 779 aa14.22□□□□□ -0.13
NEK9-209ENST00000556170 NME6O75414 186 aaPredicted RBP14.22□□□□□ -0.13
NEK9-209ENST00000556170 C1orf105O95561 183 aa14.22□□□□□ -0.13
NEK9-209ENST00000556170 HPRP00739 348 aa14.22□□□□□ -0.13
NEK9-209ENST00000556170 C1QCP02747 245 aa14.22□□□□□ -0.13
NEK9-209ENST00000556170 STSP08842 583 aa14.22□□□□□ -0.13
NEK9-209ENST00000556170 ITGB8P26012 769 aa14.22□□□□□ -0.13
NEK9-209ENST00000556170 EPHA2P29317 976 aa14.22□□□□□ -0.13
NEK9-209ENST00000556170 C21orf33P30042 268 aaPredicted RBP14.22□□□□□ -0.13
NEK9-209ENST00000556170 CCT3P49368 545 aaKnown RBP14.22□□□□□ -0.13
NEK9-209ENST00000556170 NKX3-2P78367 333 aa14.22□□□□□ -0.13
NEK9-209ENST00000556170 DNASE1L3Q13609 305 aa14.22□□□□□ -0.13
NEK9-209ENST00000556170 CLEC12AQ5QGZ9 265 aa14.22□□□□□ -0.13
NEK9-209ENST00000556170 ZNF852Q6ZMS4 543 aa14.22□□□□□ -0.13
NEK9-209ENST00000556170 MSRB3Q8IXL7 192 aa14.22□□□□□ -0.13
NEK9-209ENST00000556170 ZZZ3Q8IYH5 903 aa14.22□□□□□ -0.13
NEK9-209ENST00000556170 CCDC116Q8IYX3 515 aa14.22□□□□□ -0.13
NEK9-209ENST00000556170 C10orf111Q8N326 155 aa14.22□□□□□ -0.13
NEK9-209ENST00000556170 SMPDL3AQ92484 453 aa14.22□□□□□ -0.13
NEK9-209ENST00000556170 ZBED6CLQ96FA7 236 aaPredicted RBP14.22□□□□□ -0.13
NEK9-209ENST00000556170 ART5Q96L15 291 aa14.22□□□□□ -0.13
NEK9-209ENST00000556170 FAM129BQ96TA1 746 aa14.22□□□□□ -0.13
NEK9-209ENST00000556170 CCDC3Q9BQI4 270 aa14.22□□□□□ -0.13
NEK9-209ENST00000556170 DCSTAMPQ9H295 470 aa14.22□□□□□ -0.13
NEK9-209ENST00000556170 DNAJC27Q9NZQ0 273 aa14.22□□□□□ -0.13
NEK9-209ENST00000556170 NDUFS4O43181 175 aa14.22□□□□□ -0.13
NEK9-209ENST00000556170 RASGRP1O95267 797 aa14.22□□□□□ -0.13
NEK9-209ENST00000556170 CD247P20963 164 aa14.22□□□□□ -0.13
NEK9-209ENST00000556170 GSTM5P46439 218 aa14.22□□□□□ -0.13
NEK9-209ENST00000556170 COX20Q5RI15 118 aa14.22□□□□□ -0.13
NEK9-209ENST00000556170 TRIM69Q86WT6 500 aa14.22□□□□□ -0.13
NEK9-209ENST00000556170 NUDT13Q86X67 352 aa14.22□□□□□ -0.13
NEK9-209ENST00000556170 MMP21Q8N119 569 aa14.22□□□□□ -0.13
NEK9-209ENST00000556170 L3MBTL4Q8NA19 623 aa14.22□□□□□ -0.13
NEK9-209ENST00000556170 TESCQ96BS2 214 aa14.22□□□□□ -0.13
NEK9-209ENST00000556170 OTUB2Q96DC9 234 aa14.22□□□□□ -0.13
NEK9-209ENST00000556170 DTD2Q96FN9 168 aa14.22□□□□□ -0.13
NEK9-209ENST00000556170 GRXCR2A6NFK2 248 aa14.22□□□□□ -0.13
NEK9-209ENST00000556170 PSMD11O00231 422 aa14.22□□□□□ -0.13
NEK9-209ENST00000556170 EIF3FO00303 357 aaPredicted RBP14.22□□□□□ -0.13
NEK9-209ENST00000556170 ADARB1P78563 741 aaKnown RBP14.22□□□□□ -0.13
NEK9-209ENST00000556170 SNAPC1Q16533 368 aa14.22□□□□□ -0.13
NEK9-209ENST00000556170 ZC3H12BQ5HYM0 836 aaKnown RBP14.22□□□□□ -0.13
NEK9-209ENST00000556170 COLEC12Q5KU26 742 aa14.22□□□□□ -0.13
NEK9-209ENST00000556170 SHQ1Q6PI26 577 aaKnown RBP14.22□□□□□ -0.13
NEK9-209ENST00000556170 GATAD2AQ86YP4 633 aa14.22□□□□□ -0.13
NEK9-209ENST00000556170 KCNS3Q9BQ31 491 aa14.22□□□□□ -0.13
NEK9-209ENST00000556170 GPR83Q9NYM4 423 aa14.22□□□□□ -0.13
NEK9-209ENST00000556170 ASCC3Q8N3C0 2202 aaKnown RBP14.22□□□□□ -0.13
NEK9-209ENST00000556170 MAP1BP46821 2468 aaKnown RBP14.21□□□□□ -0.13
NEK9-209ENST00000556170 PRRT4C9JH25 899 aa14.21□□□□□ -0.13
NEK9-209ENST00000556170 ANKRD28O15084 1053 aa14.21□□□□□ -0.13
NEK9-209ENST00000556170 TSPAN19P0C672 248 aa14.21□□□□□ -0.13
NEK9-209ENST00000556170 MYL12AP19105 171 aa14.21□□□□□ -0.13
NEK9-209ENST00000556170 TAS2R41P59536 307 aa14.21□□□□□ -0.13
NEK9-209ENST00000556170 DEFA1P59665 94 aa14.21□□□□□ -0.13
NEK9-209ENST00000556170 DEFA3P59666 94 aa14.21□□□□□ -0.13
NEK9-209ENST00000556170 EMX1Q04741 257 aaPredicted RBP14.21□□□□□ -0.13
NEK9-209ENST00000556170 TMEM215Q68D42 235 aa14.21□□□□□ -0.13
NEK9-209ENST00000556170 SPRED2Q7Z698 418 aa14.21□□□□□ -0.13
NEK9-209ENST00000556170 MEX3DQ86XN8 651 aaKnown RBP14.21□□□□□ -0.13
NEK9-209ENST00000556170 CHCHD4Q8N4Q1 142 aa14.21□□□□□ -0.13
NEK9-209ENST00000556170 RPL3LQ92901 407 aaKnown RBP14.21□□□□□ -0.13
NEK9-209ENST00000556170 POP5Q969H6 163 aaKnown RBP14.21□□□□□ -0.13
NEK9-209ENST00000556170 DUS3LQ96G46 650 aaKnown RBP14.21□□□□□ -0.13
NEK9-209ENST00000556170 MCCC1Q96RQ3 725 aaPredicted RBP14.21□□□□□ -0.13
NEK9-209ENST00000556170 MARCH7Q9H992 704 aa14.21□□□□□ -0.13
NEK9-209ENST00000556170 CUEDC1Q9NWM3 386 aaPredicted RBP14.21□□□□□ -0.13
NEK9-209ENST00000556170 KAT7O95251 611 aa14.21□□□□□ -0.13
NEK9-209ENST00000556170 CTSLP07711 333 aa14.21□□□□□ -0.13
NEK9-209ENST00000556170 OR12D1P0DN82 309 aa14.21□□□□□ -0.13
NEK9-209ENST00000556170 DAPP51397 102 aa14.21□□□□□ -0.13
NEK9-209ENST00000556170 TAP2Q03519 686 aa14.21□□□□□ -0.13
NEK9-209ENST00000556170 ST3GAL4Q11206 333 aa14.21□□□□□ -0.13
NEK9-209ENST00000556170 NCF4Q15080 339 aa14.21□□□□□ -0.13
NEK9-209ENST00000556170 BORAQ6PGQ7 559 aa14.21□□□□□ -0.13
NEK9-209ENST00000556170 SCAIQ8N9R8 606 aa14.21□□□□□ -0.13
NEK9-209ENST00000556170 GEMIN6Q8WXD5 167 aaKnown RBP14.21□□□□□ -0.13
NEK9-209ENST00000556170 SLC35G5Q96KT7 338 aa14.21□□□□□ -0.13
NEK9-209ENST00000556170 SLC6A16Q9GZN6 736 aa14.21□□□□□ -0.13
NEK9-209ENST00000556170 MRPS30Q9NP92 439 aaKnown RBP14.21□□□□□ -0.13
NEK9-209ENST00000556170 KLHL3Q9UH77 587 aa14.21□□□□□ -0.13
NEK9-209ENST00000556170 ENOPH1Q9UHY7 261 aa14.21□□□□□ -0.13
NEK9-209ENST00000556170 CH25HO95992 272 aa14.21□□□□□ -0.14
NEK9-209ENST00000556170 ACTR1BP42025 376 aa14.21□□□□□ -0.14
NEK9-209ENST00000556170 AVPR1BP47901 424 aa14.21□□□□□ -0.14
NEK9-209ENST00000556170 TMBIM6P55061 237 aa14.21□□□□□ -0.14
NEK9-209ENST00000556170 ACTR1AP61163 376 aa14.21□□□□□ -0.14
NEK9-209ENST00000556170 HNRNPA1L2Q32P51 320 aaKnown RBP14.21□□□□□ -0.14
NEK9-209ENST00000556170 OLIG3Q7RTU3 272 aa14.21□□□□□ -0.14
NEK9-209ENST00000556170 CAMKK1Q8N5S9 505 aa14.21□□□□□ -0.14
NEK9-209ENST00000556170 CLIP3Q96DZ5 547 aa14.21□□□□□ -0.14
NEK9-209ENST00000556170 LRIG1Q96JA1 1093 aa14.21□□□□□ -0.14
NEK9-209ENST00000556170 ZNF347Q96SE7 839 aa14.21□□□□□ -0.14
NEK9-209ENST00000556170 RHNO1Q9BSD3 238 aa14.21□□□□□ -0.14
NEK9-209ENST00000556170 PDCD11Q14690 1871 aaKnown RBP14.21□□□□□ -0.14
NEK9-209ENST00000556170 DOCK6Q96HP0 2047 aa14.21□□□□□ -0.14
NEK9-209ENST00000556170 PDE9AO76083 593 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms