RNA–Protein interactions for RNA: ENST00000555806.5

NEDD1-208, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-208ENST00000555806 ADAMTS18Q8TE60 1221 aa17.26■□□□□ 0.35
NEDD1-208ENST00000555806 QRFPRQ96P65 431 aa17.26■□□□□ 0.35
NEDD1-208ENST00000555806 PSMG3-AS1Q96PY0 264 aa17.26■□□□□ 0.35
NEDD1-208ENST00000555806 F2RL3Q96RI0 385 aa17.26■□□□□ 0.35
NEDD1-208ENST00000555806 SERINC2Q96SA4 455 aa17.26■□□□□ 0.35
NEDD1-208ENST00000555806 PRTFDC1Q9NRG1 225 aa17.26■□□□□ 0.35
NEDD1-208ENST00000555806 MRPS33Q9Y291 106 aaKnown RBP17.26■□□□□ 0.35
NEDD1-208ENST00000555806 IGKV3D-11A0A0A0MRZ8 115 aa17.25■□□□□ 0.35
NEDD1-208ENST00000555806 CCDC189A1A4V9 331 aa17.25■□□□□ 0.35
NEDD1-208ENST00000555806 KLHL2O95198 593 aa17.25■□□□□ 0.35
NEDD1-208ENST00000555806 RASAL1O95294 804 aa17.25■□□□□ 0.35
NEDD1-208ENST00000555806 ALDOAP04075 364 aaKnown RBP17.25■□□□□ 0.35
NEDD1-208ENST00000555806 GP1BBP13224 206 aa17.25■□□□□ 0.35
NEDD1-208ENST00000555806 MTHFD2P13995 350 aa17.25■□□□□ 0.35
NEDD1-208ENST00000555806 EPB42P16452 691 aa17.25■□□□□ 0.35
NEDD1-208ENST00000555806 CASP2P42575 452 aa17.25■□□□□ 0.35
NEDD1-208ENST00000555806 ST13P50502 369 aaKnown RBP17.25■□□□□ 0.35
NEDD1-208ENST00000555806 ACAP2Q15057 778 aa17.25■□□□□ 0.35
NEDD1-208ENST00000555806 PFKFB4Q16877 469 aa17.25■□□□□ 0.35
NEDD1-208ENST00000555806 ZNF766Q5HY98 468 aa17.25■□□□□ 0.35
NEDD1-208ENST00000555806 MED27Q6P2C8 311 aa17.25■□□□□ 0.35
NEDD1-208ENST00000555806 MYLK4Q86YV6 388 aaPredicted RBP17.25■□□□□ 0.35
NEDD1-208ENST00000555806 KIF18AQ8NI77 898 aa17.25■□□□□ 0.35
NEDD1-208ENST00000555806 SLC44A1Q8WWI5 657 aa17.25■□□□□ 0.35
NEDD1-208ENST00000555806 TAAR6Q96RI8 345 aa17.25■□□□□ 0.35
NEDD1-208ENST00000555806 PAFAH2Q99487 392 aa17.25■□□□□ 0.35
NEDD1-208ENST00000555806 NPAS2Q99743 824 aa17.25■□□□□ 0.35
NEDD1-208ENST00000555806 UTP23Q9BRU9 249 aaKnown RBP17.25■□□□□ 0.35
NEDD1-208ENST00000555806 MS4A8Q9BY19 250 aa17.25■□□□□ 0.35
NEDD1-208ENST00000555806 FUT8Q9BYC5 575 aa17.25■□□□□ 0.35
NEDD1-208ENST00000555806 CDCP1Q9H5V8 836 aa17.25■□□□□ 0.35
NEDD1-208ENST00000555806 ANKRD10Q9NXR5 420 aa17.25■□□□□ 0.35
NEDD1-208ENST00000555806 CPSF2Q9P2I0 782 aaKnown RBP17.25■□□□□ 0.35
NEDD1-208ENST00000555806 GABRR3A8MPY1 467 aa17.24■□□□□ 0.35
NEDD1-208ENST00000555806 CLDN4O14493 209 aa17.24■□□□□ 0.35
NEDD1-208ENST00000555806 MAN1A2O60476 641 aa17.24■□□□□ 0.35
NEDD1-208ENST00000555806 SH3BGRLO75368 114 aa17.24■□□□□ 0.35
NEDD1-208ENST00000555806 RNF224P0DH78 156 aa17.24■□□□□ 0.35
NEDD1-208ENST00000555806 ECHS1P30084 290 aa17.24■□□□□ 0.35
NEDD1-208ENST00000555806 OC90Q02509 493 aaPredicted RBP17.24■□□□□ 0.35
NEDD1-208ENST00000555806 SLC13A2Q13183 592 aa17.24■□□□□ 0.35
NEDD1-208ENST00000555806 TUBA3CQ13748 450 aa17.24■□□□□ 0.35
NEDD1-208ENST00000555806 RCN2Q14257 317 aa17.24■□□□□ 0.35
NEDD1-208ENST00000555806 SETDB1Q15047 1291 aa17.24■□□□□ 0.35
NEDD1-208ENST00000555806 TUBA3EQ6PEY2 450 aa17.24■□□□□ 0.35
NEDD1-208ENST00000555806 SRFBP1Q8NEF9 429 aaKnown RBP17.24■□□□□ 0.35
NEDD1-208ENST00000555806 UHMK1Q8TAS1 419 aaKnown RBP17.24■□□□□ 0.35
NEDD1-208ENST00000555806 ELP5Q8TE02 316 aa17.24■□□□□ 0.35
NEDD1-208ENST00000555806 ZNF473Q8WTR7 871 aaKnown RBP17.24■□□□□ 0.35
NEDD1-208ENST00000555806 KCNC2Q96PR1 638 aa17.24■□□□□ 0.35
NEDD1-208ENST00000555806 SLX1AQ9BQ83 275 aa17.24■□□□□ 0.35
NEDD1-208ENST00000555806 PNO1Q9NRX1 252 aaKnown RBP17.24■□□□□ 0.35
NEDD1-208ENST00000555806 ERRFI1Q9UJM3 462 aaPredicted RBP17.24■□□□□ 0.35
NEDD1-208ENST00000555806 OSGIN2Q9Y236 505 aa17.24■□□□□ 0.35
NEDD1-208ENST00000555806 SLC5A6Q9Y289 635 aa17.24■□□□□ 0.35
NEDD1-208ENST00000555806 POC1B-GALNT4F8VUJ3 575 aa17.23■□□□□ 0.35
NEDD1-208ENST00000555806 MYO1DO94832 1006 aa17.23■□□□□ 0.35
NEDD1-208ENST00000555806 DDAH2O95865 285 aa17.23■□□□□ 0.35
NEDD1-208ENST00000555806 TGFB1P01137 390 aa17.23■□□□□ 0.35
NEDD1-208ENST00000555806 SERPINB9P50453 376 aa17.23■□□□□ 0.35
NEDD1-208ENST00000555806 HNRNPFP52597 415 aaKnown RBP17.23■□□□□ 0.35
NEDD1-208ENST00000555806 ALDH18A1P54886 795 aaKnown RBP17.23■□□□□ 0.35
NEDD1-208ENST00000555806 LIM2P55344 173 aa17.23■□□□□ 0.35
NEDD1-208ENST00000555806 HSD17B7P56937 341 aa17.23■□□□□ 0.35
NEDD1-208ENST00000555806 DDX39BQ13838 428 aaKnown RBP17.23■□□□□ 0.35
NEDD1-208ENST00000555806 E2F2Q14209 437 aa17.23■□□□□ 0.35
NEDD1-208ENST00000555806 NAA30Q147X3 362 aaPredicted RBP17.23■□□□□ 0.35
NEDD1-208ENST00000555806 OR1C1Q15619 314 aa17.23■□□□□ 0.35
NEDD1-208ENST00000555806 GRHL2Q6ISB3 625 aa17.23■□□□□ 0.35
NEDD1-208ENST00000555806 CLNKQ7Z7G1 428 aa17.23■□□□□ 0.35
NEDD1-208ENST00000555806 RPS19BP1Q86WX3 136 aaKnown RBP17.23■□□□□ 0.35
NEDD1-208ENST00000555806 SCUBE1Q8IWY4 988 aa17.23■□□□□ 0.35
NEDD1-208ENST00000555806 ZNF595Q8IYB9 648 aa17.23■□□□□ 0.35
NEDD1-208ENST00000555806 LAS2Q8IYD9 372 aa17.23■□□□□ 0.35
NEDD1-208ENST00000555806 LGI4Q8N135 537 aa17.23■□□□□ 0.35
NEDD1-208ENST00000555806 CEP112Q8N8E3 955 aa17.23■□□□□ 0.35
NEDD1-208ENST00000555806 TMEM52Q8NDY8 209 aa17.23■□□□□ 0.35
NEDD1-208ENST00000555806 NR4A3Q92570 626 aa17.23■□□□□ 0.35
NEDD1-208ENST00000555806 C5orf34Q96MH7 638 aa17.23■□□□□ 0.35
NEDD1-208ENST00000555806 SIGLEC12Q96PQ1 595 aa17.23■□□□□ 0.35
NEDD1-208ENST00000555806 CSF3RQ99062 836 aa17.23■□□□□ 0.35
NEDD1-208ENST00000555806 ROGDIQ9GZN7 287 aa17.23■□□□□ 0.35
NEDD1-208ENST00000555806 KLHL1Q9NR64 748 aa17.23■□□□□ 0.35
NEDD1-208ENST00000555806 DAPP1Q9UN19 280 aa17.23■□□□□ 0.35
NEDD1-208ENST00000555806 CYSRT1A8MQ03 144 aa17.22■□□□□ 0.35
NEDD1-208ENST00000555806 RTCAO00442 366 aaKnown RBP17.22■□□□□ 0.35
NEDD1-208ENST00000555806 KRT38O76015 456 aa17.22■□□□□ 0.35
NEDD1-208ENST00000555806 CRYABP02511 175 aaKnown RBP17.22■□□□□ 0.35
NEDD1-208ENST00000555806 CD46P15529 392 aa17.22■□□□□ 0.35
NEDD1-208ENST00000555806 SERPINB1P30740 379 aa17.22■□□□□ 0.35
NEDD1-208ENST00000555806 CD96P40200 585 aa17.22■□□□□ 0.35
NEDD1-208ENST00000555806 PMP22Q01453 160 aa17.22■□□□□ 0.35
NEDD1-208ENST00000555806 TMEM35AQ53FP2 167 aa17.22■□□□□ 0.35
NEDD1-208ENST00000555806 TECRLQ5HYJ1 363 aa17.22■□□□□ 0.35
NEDD1-208ENST00000555806 CHSY3Q70JA7 882 aa17.22■□□□□ 0.35
NEDD1-208ENST00000555806 PLD6Q8N2A8 252 aaKnown RBP17.22■□□□□ 0.35
NEDD1-208ENST00000555806 NFAM1Q8NET5 270 aaPredicted RBP17.22■□□□□ 0.35
NEDD1-208ENST00000555806 B3GNT7Q8NFL0 401 aa17.22■□□□□ 0.35
NEDD1-208ENST00000555806 OR7G3Q8NG95 312 aa17.22■□□□□ 0.35
NEDD1-208ENST00000555806 TRIM44Q96DX7 344 aaPredicted RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms