RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 LGI4Q8N135 537 aa10.11□□□□□ -0.79
TDP1-212ENST00000555565 SPATA6LQ8N4H0 392 aa10.11□□□□□ -0.79
TDP1-212ENST00000555565 MARVELD2Q8N4S9 558 aa10.11□□□□□ -0.79
TDP1-212ENST00000555565 CA5BP1Q8WTZ4 195 aa10.11□□□□□ -0.79
TDP1-212ENST00000555565 SDCCAG3Q96C92 435 aa10.11□□□□□ -0.79
TDP1-212ENST00000555565 RHBDF1Q96CC6 855 aa10.11□□□□□ -0.79
TDP1-212ENST00000555565 SCMH1Q96GD3 660 aa10.11□□□□□ -0.79
TDP1-212ENST00000555565 MAGED4Q96JG8 741 aa10.11□□□□□ -0.79
TDP1-212ENST00000555565 PDLIM2Q96JY6 352 aa10.11□□□□□ -0.79
TDP1-212ENST00000555565 CDCP1Q9H5V8 836 aa10.11□□□□□ -0.79
TDP1-212ENST00000555565 CAB39LQ9H9S4 337 aa10.11□□□□□ -0.79
TDP1-212ENST00000555565 POPDC3Q9HBV1 291 aa10.11□□□□□ -0.79
TDP1-212ENST00000555565 NECTIN3Q9NQS3 549 aa10.11□□□□□ -0.79
TDP1-212ENST00000555565 CCM2LQ9NUG4 571 aaPredicted RBP10.11□□□□□ -0.79
TDP1-212ENST00000555565 NSMCE4AQ9NXX6 385 aa10.11□□□□□ -0.79
TDP1-212ENST00000555565 RNF14Q9UBS8 474 aa10.11□□□□□ -0.79
TDP1-212ENST00000555565 NPIPA1Q9UND3 350 aa10.11□□□□□ -0.79
TDP1-212ENST00000555565 TCRBV16S1A1N1A0A5B0 115 aa10.1□□□□□ -0.79
TDP1-212ENST00000555565 NCF1BA6NI72 391 aaPredicted RBP10.1□□□□□ -0.79
TDP1-212ENST00000555565 NCF1CA8MVU1 366 aaPredicted RBP10.1□□□□□ -0.79
TDP1-212ENST00000555565 CXorf49A8MYA2 514 aaPredicted RBP10.1□□□□□ -0.79
TDP1-212ENST00000555565 TAPBPO15533 448 aa10.1□□□□□ -0.79
TDP1-212ENST00000555565 ASNA1O43681 348 aa10.1□□□□□ -0.79
TDP1-212ENST00000555565 PRAMEF4O60810 478 aa10.1□□□□□ -0.79
TDP1-212ENST00000555565 TOXO94900 526 aa10.1□□□□□ -0.79
TDP1-212ENST00000555565 WDR47O94967 919 aa10.1□□□□□ -0.79
TDP1-212ENST00000555565 NCF1P14598 390 aaPredicted RBP10.1□□□□□ -0.79
TDP1-212ENST00000555565 FOSL1P15407 271 aa10.1□□□□□ -0.79
TDP1-212ENST00000555565 GNAZP19086 355 aa10.1□□□□□ -0.79
TDP1-212ENST00000555565 EEF1DP29692 281 aaKnown RBP10.1□□□□□ -0.79
TDP1-212ENST00000555565 SSTR1P30872 391 aa10.1□□□□□ -0.79
TDP1-212ENST00000555565 HNRNPH1P31943 449 aaKnown RBP10.1□□□□□ -0.79
TDP1-212ENST00000555565 TAS2R50P59544 299 aa10.1□□□□□ -0.79
TDP1-212ENST00000555565 POU4F1Q01851 419 aa10.1□□□□□ -0.79
TDP1-212ENST00000555565 OC90Q02509 493 aaPredicted RBP10.1□□□□□ -0.79
TDP1-212ENST00000555565 SLBPQ14493 270 aaKnown RBP eCLIP10.1□□□□□ -0.79
TDP1-212ENST00000555565 TGFBIQ15582 683 aa10.1□□□□□ -0.79
TDP1-212ENST00000555565 RNFT1Q5M7Z0 435 aa10.1□□□□□ -0.79
TDP1-212ENST00000555565 PRAMEF9Q5VWM5 478 aa10.1□□□□□ -0.79
TDP1-212ENST00000555565 FRA10AC1Q70Z53 315 aa10.1□□□□□ -0.79
TDP1-212ENST00000555565 GALNTL5Q7Z4T8 443 aa10.1□□□□□ -0.79
TDP1-212ENST00000555565 RPS19BP1Q86WX3 136 aaKnown RBP10.1□□□□□ -0.79
TDP1-212ENST00000555565 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.1□□□□□ -0.79
TDP1-212ENST00000555565 CA13Q8N1Q1 262 aa10.1□□□□□ -0.79
TDP1-212ENST00000555565 CHDHQ8NE62 594 aaPredicted RBP10.1□□□□□ -0.79
TDP1-212ENST00000555565 NFAM1Q8NET5 270 aaPredicted RBP10.1□□□□□ -0.79
TDP1-212ENST00000555565 PYROXD1Q8WU10 500 aa10.1□□□□□ -0.79
TDP1-212ENST00000555565 NINJ1Q92982 152 aa10.1□□□□□ -0.79
TDP1-212ENST00000555565 FRMD6Q96NE9 622 aa10.1□□□□□ -0.79
TDP1-212ENST00000555565 ERP44Q9BS26 406 aa10.1□□□□□ -0.79
TDP1-212ENST00000555565 DERL2Q9GZP9 239 aa10.1□□□□□ -0.79
TDP1-212ENST00000555565 DPH5Q9H2P9 285 aa10.1□□□□□ -0.79
TDP1-212ENST00000555565 RHBGQ9H310 441 aa10.1□□□□□ -0.79
TDP1-212ENST00000555565 LIME1Q9H400 295 aa10.1□□□□□ -0.79
TDP1-212ENST00000555565 PRDM9Q9NQV7 894 aa10.1□□□□□ -0.79
TDP1-212ENST00000555565 HCFC1P51610 2035 aa10.1□□□□□ -0.79
TDP1-212ENST00000555565 DNAJC13O75165 2243 aa10.1□□□□□ -0.79
TDP1-212ENST00000555565 ZNF407Q9C0G0 2248 aa10.1□□□□□ -0.79
TDP1-212ENST00000555565 FLNAP21333 2647 aaKnown RBP10.09□□□□□ -0.79
TDP1-212ENST00000555565 A0A0G2JN53 185 aa10.09□□□□□ -0.79
TDP1-212ENST00000555565 FAM187AA6NFU0 413 aa10.09□□□□□ -0.79
TDP1-212ENST00000555565 SAGE2PA6NJ88 616 aa10.09□□□□□ -0.79
TDP1-212ENST00000555565 A8MUA0 341 aa10.09□□□□□ -0.79
TDP1-212ENST00000555565 PSMD12O00232 456 aaPredicted RBP10.09□□□□□ -0.79
TDP1-212ENST00000555565 PHGDHO43175 533 aaKnown RBP10.09□□□□□ -0.79
TDP1-212ENST00000555565 H2AFYO75367 372 aaKnown RBP10.09□□□□□ -0.79
TDP1-212ENST00000555565 TBX6O95947 436 aaPredicted RBP10.09□□□□□ -0.79
TDP1-212ENST00000555565 C1QAP02745 245 aa10.09□□□□□ -0.79
TDP1-212ENST00000555565 SP1P08047 785 aa10.09□□□□□ -0.79
TDP1-212ENST00000555565 CCDC166P0CW27 439 aa10.09□□□□□ -0.79
TDP1-212ENST00000555565 CD46P15529 392 aa10.09□□□□□ -0.79
TDP1-212ENST00000555565 MSX1P28360 303 aa10.09□□□□□ -0.79
TDP1-212ENST00000555565 TPP2P29144 1249 aaPredicted RBP10.09□□□□□ -0.79
TDP1-212ENST00000555565 GGT5P36269 586 aa10.09□□□□□ -0.79
TDP1-212ENST00000555565 SLC12A2P55011 1212 aa10.09□□□□□ -0.79
TDP1-212ENST00000555565 MLF1P58340 268 aa10.09□□□□□ -0.79
TDP1-212ENST00000555565 STXBP1P61764 594 aaKnown RBP10.09□□□□□ -0.79
TDP1-212ENST00000555565 BTN3A2P78410 334 aa10.09□□□□□ -0.79
TDP1-212ENST00000555565 ALDH6A1Q02252 535 aaKnown RBP10.09□□□□□ -0.79
TDP1-212ENST00000555565 LTBQ06643 244 aa10.09□□□□□ -0.79
TDP1-212ENST00000555565 ILF2Q12905 390 aaKnown RBP10.09□□□□□ -0.79
TDP1-212ENST00000555565 RUNX2Q13950 521 aa10.09□□□□□ -0.79
TDP1-212ENST00000555565 FBXO48Q5FWF7 155 aa10.09□□□□□ -0.79
TDP1-212ENST00000555565 SLC25A25Q6KCM7 469 aa10.09□□□□□ -0.79
TDP1-212ENST00000555565 TMIGD1Q6UXZ0 262 aa10.09□□□□□ -0.79
TDP1-212ENST00000555565 ZNF227Q86WZ6 799 aa10.09□□□□□ -0.79
TDP1-212ENST00000555565 ARMC10Q8N2F6 343 aa10.09□□□□□ -0.79
TDP1-212ENST00000555565 HORMAD2Q8N7B1 307 aa10.09□□□□□ -0.79
TDP1-212ENST00000555565 TMEM178AQ8NBL3 297 aa10.09□□□□□ -0.79
TDP1-212ENST00000555565 APCDD1LQ8NCL9 501 aa10.09□□□□□ -0.79
TDP1-212ENST00000555565 BBOF1Q8ND07 529 aa10.09□□□□□ -0.79
TDP1-212ENST00000555565 LILRB4Q8NHJ6 448 aa10.09□□□□□ -0.79
TDP1-212ENST00000555565 GAL3ST3Q96A11 431 aa10.09□□□□□ -0.79
TDP1-212ENST00000555565 MS4A6EQ96DS6 147 aa10.09□□□□□ -0.79
TDP1-212ENST00000555565 TMEM79Q9BSE2 394 aa10.09□□□□□ -0.79
TDP1-212ENST00000555565 UCK2Q9BZX2 261 aa10.09□□□□□ -0.79
TDP1-212ENST00000555565 TRIM45Q9H8W5 580 aaPredicted RBP10.09□□□□□ -0.79
TDP1-212ENST00000555565 SAYSD1Q9NPB0 183 aa10.09□□□□□ -0.79
TDP1-212ENST00000555565 GRHL1Q9NZI5 618 aa10.09□□□□□ -0.79
TDP1-212ENST00000555565 WHRNQ9P202 907 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms