RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 SDC1P18827 310 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 HIST1H2ADP20671 130 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 PSMA1P25786 263 aaKnown RBP10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 PTBP1P26599 531 aaKnown RBP eCLIP10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 PCGF2P35227 344 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 RPIAP49247 311 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 GPLD1P80108 840 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 SP140Q13342 867 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 IKZF1Q13422 519 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 QPRTQ15274 297 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 SOWAHCQ53LP3 525 aaPredicted RBP10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 ESCO2Q56NI9 601 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 CRTC1Q6UUV9 634 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 HSDL2Q6YN16 418 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 FAM92BQ6ZTR7 304 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 CCDC149Q6ZUS6 474 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 ANKRD33Q7Z3H0 272 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 RAVER1Q8IY67 606 aaKnown RBP10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 IL17RCQ8NAC3 791 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 B3GNT7Q8NFL0 401 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 METTL2AQ96IZ6 378 aaKnown RBP10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 MSLNLQ96KJ4 702 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 HIST1H2AHQ96KK5 128 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 FEVQ99581 238 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 HIST1H2AJQ99878 128 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 CCM2Q9BSQ5 444 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 H2AFJQ9BTM1 129 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 SLC12A9Q9BXP2 914 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 MCOLN1Q9GZU1 580 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 FAM83DQ9H4H8 585 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 SUV39H2Q9H5I1 410 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 THSD1Q9NS62 852 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 FARSBQ9NSD9 589 aaKnown RBP10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 CLN6Q9NWW5 311 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 TOR4AQ9NXH8 423 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 B3GNT2Q9NY97 397 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 MRPL39Q9NYK5 338 aaKnown RBP10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 MUTYHQ9UIF7 546 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 PHF11Q9UIL8 331 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 PPT2Q9UMR5 302 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 DLGAP4Q9Y2H0 992 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 ANAPC1Q9H1A4 1944 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 NUP214P35658 2090 aaPredicted RBP10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 TRAV19A0A0A6YYK7 116 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 RGS5O15539 181 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 HCN1O60741 890 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 ZNF821O75541 412 aaPredicted RBP10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 GPX5O75715 221 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 IL1AP01583 271 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 HLA-DQB1P01920 261 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 CKMP06732 381 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 SRCP12931 536 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 HLA-FP30511 346 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 CA8P35219 290 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 GDF5P43026 501 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 ZXDBP98169 803 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 SLC14A1Q13336 389 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 ARHGEF7Q14155 803 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 MED22Q15528 200 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 SSX1Q16384 188 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 BAK1Q16611 211 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 MICAQ29983 383 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 Q5BKY6 102 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 DGKKQ5KSL6 1271 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 PLEKHS1Q5SXH7 462 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 PDE12Q6L8Q7 609 aaKnown RBP10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 DEFB128Q7Z7B8 93 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 CADM2Q8N3J6 435 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 GPR26Q8NDV2 337 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 OR9Q1Q8NGQ5 310 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 GPR151Q8TDV0 419 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 ZNF689Q96CS4 500 aaPredicted RBP10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 REPS1Q96D71 796 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 CLIP3Q96DZ5 547 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 SAMD11Q96NU1 681 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 PANX1Q96RD7 426 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 MS4A12Q9NXJ0 267 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 ARL15Q9NXU5 204 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 GPRC5BQ9NZH0 403 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 SH3BP4Q9P0V3 963 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 CFAP97Q9P2B7 532 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 NUFIP1Q9UHK0 495 aaKnown RBP10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 NUP50Q9UKX7 468 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 PRELID1Q9Y255 219 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 BOLA1Q9Y3E2 137 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 PCDHB11Q9Y5F2 797 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 SNX8Q9Y5X2 465 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 HYKKA2RU49 373 aa10.25□□□□□ -0.77
MTHFD1-210ENST00000555252 NPIPB15A6NHN6 443 aaPredicted RBP10.25□□□□□ -0.77
MTHFD1-210ENST00000555252 ZSCAN5BA6NJL1 495 aa10.25□□□□□ -0.77
MTHFD1-210ENST00000555252 GRM6O15303 877 aa10.25□□□□□ -0.77
MTHFD1-210ENST00000555252 HSMCR30P0CW71 290 aa10.25□□□□□ -0.77
MTHFD1-210ENST00000555252 AOAHP28039 575 aa10.25□□□□□ -0.77
MTHFD1-210ENST00000555252 GABRR2P28476 465 aa10.25□□□□□ -0.77
MTHFD1-210ENST00000555252 CSTF2P33240 577 aaKnown RBP eCLIP10.25□□□□□ -0.77
MTHFD1-210ENST00000555252 RPS19P39019 145 aaKnown RBP10.25□□□□□ -0.77
MTHFD1-210ENST00000555252 IDH2P48735 452 aaKnown RBP10.25□□□□□ -0.77
MTHFD1-210ENST00000555252 POLR2LP62875 67 aaKnown RBP10.25□□□□□ -0.77
MTHFD1-210ENST00000555252 SELENOWP63302 87 aa10.25□□□□□ -0.77
MTHFD1-210ENST00000555252 HSPA14Q0VDF9 509 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms