RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 KLC1Q07866 573 aa10.02□□□□□ -0.81
TMEM260-206ENST00000555046 SRSF6Q13247 344 aaKnown RBP10.02□□□□□ -0.81
TMEM260-206ENST00000555046 BIKQ13323 160 aa10.02□□□□□ -0.81
TMEM260-206ENST00000555046 DEFB109BQ30KR1 87 aa10.02□□□□□ -0.81
TMEM260-206ENST00000555046 TUBB8Q3ZCM7 444 aa10.02□□□□□ -0.81
TMEM260-206ENST00000555046 PRAMEF9Q5VWM5 478 aa10.02□□□□□ -0.81
TMEM260-206ENST00000555046 KHDRBS2Q5VWX1 349 aaKnown RBP10.02□□□□□ -0.81
TMEM260-206ENST00000555046 CRYBG3Q68DQ2 2970 aa10.02□□□□□ -0.81
TMEM260-206ENST00000555046 OR4C11Q6IEV9 310 aa10.02□□□□□ -0.81
TMEM260-206ENST00000555046 ABHD17CQ6PCB6 329 aa10.02□□□□□ -0.81
TMEM260-206ENST00000555046 PAGE2Q7Z2X7 111 aa10.02□□□□□ -0.81
TMEM260-206ENST00000555046 EXOC3L1Q86VI1 746 aa10.02□□□□□ -0.81
TMEM260-206ENST00000555046 KIRREL3Q8IZU9 778 aa10.02□□□□□ -0.81
TMEM260-206ENST00000555046 METTL27Q8N6F8 245 aaPredicted RBP10.02□□□□□ -0.81
TMEM260-206ENST00000555046 GBP7Q8N8V2 638 aaPredicted RBP10.02□□□□□ -0.81
TMEM260-206ENST00000555046 AMER3Q8N944 861 aa10.02□□□□□ -0.81
TMEM260-206ENST00000555046 OR4F6Q8NGB9 312 aa10.02□□□□□ -0.81
TMEM260-206ENST00000555046 OR52B6Q8NGF0 335 aa10.02□□□□□ -0.81
TMEM260-206ENST00000555046 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.02□□□□□ -0.81
TMEM260-206ENST00000555046 MOCOSQ96EN8 888 aa10.02□□□□□ -0.81
TMEM260-206ENST00000555046 NSUN5Q96P11 429 aaKnown RBP10.02□□□□□ -0.81
TMEM260-206ENST00000555046 FAM111AQ96PZ2 611 aa10.02□□□□□ -0.81
TMEM260-206ENST00000555046 CRB3Q9BUF7 120 aa10.02□□□□□ -0.81
TMEM260-206ENST00000555046 VIPAS39Q9H9C1 493 aa10.02□□□□□ -0.81
TMEM260-206ENST00000555046 BRF2Q9HAW0 419 aa10.02□□□□□ -0.81
TMEM260-206ENST00000555046 ZBTB26Q9HCK0 441 aa10.02□□□□□ -0.81
TMEM260-206ENST00000555046 PFDN4Q9NQP4 134 aa10.02□□□□□ -0.81
TMEM260-206ENST00000555046 C19orf25Q9UFG5 118 aaPredicted RBP10.02□□□□□ -0.81
TMEM260-206ENST00000555046 TRPS1Q9UHF7 1281 aa10.02□□□□□ -0.81
TMEM260-206ENST00000555046 EMCNQ9ULC0 261 aa10.02□□□□□ -0.81
TMEM260-206ENST00000555046 MKL2Q9ULH7 1088 aa10.02□□□□□ -0.81
TMEM260-206ENST00000555046 MAN2B2Q9Y2E5 1009 aa10.02□□□□□ -0.81
TMEM260-206ENST00000555046 MRPS18BQ9Y676 258 aaKnown RBP10.02□□□□□ -0.81
TMEM260-206ENST00000555046 PCM1Q15154 2024 aa10.02□□□□□ -0.81
TMEM260-206ENST00000555046 MTORP42345 2549 aa10.01□□□□□ -0.81
TMEM260-206ENST00000555046 FOXO6A8MYZ6 492 aa10.01□□□□□ -0.81
TMEM260-206ENST00000555046 IDSB3KWA1 339 aa10.01□□□□□ -0.81
TMEM260-206ENST00000555046 AGPSO00116 658 aa10.01□□□□□ -0.81
TMEM260-206ENST00000555046 BIRC5O15392 142 aa10.01□□□□□ -0.81
TMEM260-206ENST00000555046 TYROBPO43914 113 aa10.01□□□□□ -0.81
TMEM260-206ENST00000555046 GUCY1B2O75343 617 aa10.01□□□□□ -0.81
TMEM260-206ENST00000555046 SPAG7O75391 227 aa10.01□□□□□ -0.81
TMEM260-206ENST00000555046 SEMA3DO95025 777 aa10.01□□□□□ -0.81
TMEM260-206ENST00000555046 MED26O95402 600 aa10.01□□□□□ -0.81
TMEM260-206ENST00000555046 CHEK2O96017 543 aa10.01□□□□□ -0.81
TMEM260-206ENST00000555046 NEFHP12036 1026 aa10.01□□□□□ -0.81
TMEM260-206ENST00000555046 WT1P19544 449 aaPredicted RBP10.01□□□□□ -0.81
TMEM260-206ENST00000555046 HMOX2P30519 316 aa10.01□□□□□ -0.81
TMEM260-206ENST00000555046 OTX2P32243 289 aa10.01□□□□□ -0.81
TMEM260-206ENST00000555046 XCR1P46094 333 aa10.01□□□□□ -0.81
TMEM260-206ENST00000555046 SLC18A1P54219 525 aa10.01□□□□□ -0.81
TMEM260-206ENST00000555046 RPS18P62269 152 aaKnown RBP10.01□□□□□ -0.81
TMEM260-206ENST00000555046 GALNT1Q10472 559 aaPredicted RBP10.01□□□□□ -0.81
TMEM260-206ENST00000555046 HYAL2Q12891 473 aa10.01□□□□□ -0.81
TMEM260-206ENST00000555046 TRAF3Q13114 568 aa10.01□□□□□ -0.81
TMEM260-206ENST00000555046 DDX39BQ13838 428 aaKnown RBP10.01□□□□□ -0.81
TMEM260-206ENST00000555046 TBR1Q16650 682 aa10.01□□□□□ -0.81
TMEM260-206ENST00000555046 MINDY4Q4G0A6 757 aa10.01□□□□□ -0.81
TMEM260-206ENST00000555046 VWA2Q5GFL6 755 aa10.01□□□□□ -0.81
TMEM260-206ENST00000555046 TNFAIP8L3Q5GJ75 292 aa10.01□□□□□ -0.81
TMEM260-206ENST00000555046 MFSD4BQ5TF39 518 aa10.01□□□□□ -0.81
TMEM260-206ENST00000555046 IRAK1BP1Q5VVH5 260 aa10.01□□□□□ -0.81
TMEM260-206ENST00000555046 COX15Q7KZN9 410 aa10.01□□□□□ -0.81
TMEM260-206ENST00000555046 NUDCD3Q8IVD9 361 aa10.01□□□□□ -0.81
TMEM260-206ENST00000555046 C10orf107Q8IVU9 208 aa10.01□□□□□ -0.81
TMEM260-206ENST00000555046 APLFQ8IW19 511 aaPredicted RBP10.01□□□□□ -0.81
TMEM260-206ENST00000555046 CLEC1AQ8NC01 280 aa10.01□□□□□ -0.81
TMEM260-206ENST00000555046 PLPP5Q8NEB5 264 aa10.01□□□□□ -0.81
TMEM260-206ENST00000555046 PPP1R14CQ8TAE6 165 aa10.01□□□□□ -0.81
TMEM260-206ENST00000555046 WDR20Q8TBZ3 569 aa10.01□□□□□ -0.81
TMEM260-206ENST00000555046 SELENOMQ8WWX9 145 aa10.01□□□□□ -0.81
TMEM260-206ENST00000555046 CDK15Q96Q40 435 aa10.01□□□□□ -0.81
TMEM260-206ENST00000555046 TMEM237Q96Q45 408 aa10.01□□□□□ -0.81
TMEM260-206ENST00000555046 F2RL3Q96RI0 385 aa10.01□□□□□ -0.81
TMEM260-206ENST00000555046 MTERF1Q99551 399 aaKnown RBP10.01□□□□□ -0.81
TMEM260-206ENST00000555046 SPSB2Q99619 263 aa10.01□□□□□ -0.81
TMEM260-206ENST00000555046 MS4A8Q9BY19 250 aa10.01□□□□□ -0.81
TMEM260-206ENST00000555046 ADNPQ9H2P0 1102 aa10.01□□□□□ -0.81
TMEM260-206ENST00000555046 ACBD3Q9H3P7 528 aa10.01□□□□□ -0.81
TMEM260-206ENST00000555046 KLHL31Q9H511 634 aa10.01□□□□□ -0.81
TMEM260-206ENST00000555046 SOX17Q9H6I2 414 aaPredicted RBP10.01□□□□□ -0.81
TMEM260-206ENST00000555046 SYNPO2LQ9H987 977 aa10.01□□□□□ -0.81
TMEM260-206ENST00000555046 LYRM4Q9HD34 91 aa10.01□□□□□ -0.81
TMEM260-206ENST00000555046 MID1IP1Q9NPA3 183 aa10.01□□□□□ -0.81
TMEM260-206ENST00000555046 ATP13A2Q9NQ11 1180 aa10.01□□□□□ -0.81
TMEM260-206ENST00000555046 DMRT3Q9NQL9 472 aa10.01□□□□□ -0.81
TMEM260-206ENST00000555046 ACSS2Q9NR19 701 aa10.01□□□□□ -0.81
TMEM260-206ENST00000555046 CTSFQ9UBX1 484 aa10.01□□□□□ -0.81
TMEM260-206ENST00000555046 TUBD1Q9UJT1 453 aa10.01□□□□□ -0.81
TMEM260-206ENST00000555046 MRPS2Q9Y399 296 aaKnown RBP10.01□□□□□ -0.81
TMEM260-206ENST00000555046 SPTBP11277 2137 aa10□□□□□ -0.81
TMEM260-206ENST00000555046 ARHGAP10A1A4S6 786 aa10□□□□□ -0.81
TMEM260-206ENST00000555046 MAGEB17A8MXT2 336 aa10□□□□□ -0.81
TMEM260-206ENST00000555046 MKRN2OSH3BPM6 223 aa10□□□□□ -0.81
TMEM260-206ENST00000555046 NPHS1O60500 1241 aa10□□□□□ -0.81
TMEM260-206ENST00000555046 PRMT3O60678 531 aa10□□□□□ -0.81
TMEM260-206ENST00000555046 RDH16O75452 317 aa10□□□□□ -0.81
TMEM260-206ENST00000555046 BPGMP07738 259 aa10□□□□□ -0.81
TMEM260-206ENST00000555046 FHP07954 510 aa10□□□□□ -0.81
TMEM260-206ENST00000555046 C8orf89P0DMQ9 161 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms